Array 1 48210-49033 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIVO01000001.1 Streptomyces sp. CB02488 scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 48210 30 100.0 31 .............................. TCACCGGCTCCGGAGAGTCGGCCTGCTGCTC 48271 30 96.7 31 .............................C GCGGGACCGGCAGAGCCTTGCGGAGTGCGAC 48332 30 100.0 31 .............................. TGGGCATTGCCTCAGACCCTCTCGTCAGTGG 48393 30 96.7 32 .............................A GGAACAAGGGCAGTGCAATCACGAGGTCCTCC 48455 30 100.0 31 .............................. GTCAACCTCGCCGCCGTCTCCGGACGCAGCA 48516 30 96.7 31 .............................T TCGCCTGCATTTCCTCGTCGAGGACTTCCTT 48577 30 96.7 31 .............................T ACGGCTTCCGGACCGCCCCACAACCCGGCAC 48638 30 100.0 31 .............................. TCTACGCCGAGCTCGGCGAGCCCGACCTTCA 48699 30 96.7 31 .................A............ CGTACGCCTGGCTCCAGGTGGAGGGATACAT 48760 30 96.7 31 ...............A.............. TCGCTTCGCTCATGCCGAGCGGCGCGAAGAG 48821 30 93.3 31 ...............A.............C CGTTGCGCTCAGCCGCAACATCTACGTGGAC 48882 30 100.0 31 .............................. AGGACGATAGGTCGTGGTCGTAGGCGAGCAT 48943 30 90.0 31 .............A...........C...A CCCGGGTCCGCACCTTCAAGACCGCCACCGC 49004 30 80.0 0 ...........AATA..........C...A | ========== ====== ====== ====== ============================== ================================ ================== 14 30 96.0 31 CTGCTCCCCGCGCGTGCGGGGATGGTCCCG # Left flank : GGGGTTTCGGGCCTCGAACACCTCGCGGTGGTGGACGGCGTCGACATCTTCTCGATCAAGAACGGCACGATCATCAACAACGGTGACGGCGGCTGGAAGAACTGGGGCTTCGCGGGCACGTACGACCGCGAGAAGGACTCGAAGGAGGTGACGTTCAAGCGGTAGGGAGGTCGGCGGCGGCCGTCAGCCGGCCGCCGGTCGGTCTGTCTGTCGGGCAGACCCGGTCGAGGTGGCTTCTCTACGTTCGCGGCAGGCACCTGCCGGTGCTGCCGGAGCTGCCGGAGCTGCCGGAGCGGAACGATGACGTGGGTAAGCCTGCAGGAATGAATACGGGGCGCGTTCTCGCGTATGCGCCTCGTGGGTGGCAGGCTGAGGATAAGTTCTTGTGCCTGCGGCACCACGGTCGCAATCCGATGTGAGGCCTCATGGGCGTTTTGCCGGATTCCCTGAAGATAGTGGGAAACTGCCACCACGCGCCGTAAACCCGCAGGTCGCGCAGT # Right flank : AACTGCCTTCCAGGCCAGCCGAGTCGGGCTCTCCGCTCCCCGCACCCCCCGGAACGGCCCAACACCGCACTCCGACCGTTCACCGCCCGGTCGGGCCGCACCGCGTACGCGTCTGCCACGCATCCCTGGCTGTGGTCAGCGGCGTCCTGGCCCTCGCCCTCACCCGTCACTCCGGCAGCAGGTGCCCCCTTCGTGACAGCAGGAACTTCTTGAACGCCGCGACCGGCGGGGTGTCCGGGTGGCCGTCCAGCCAGGCCACGCCGATCTCCCGAGCGGCCCGCGGTGCCGTCACCGTCAGCTCCACGACCCCCGGGCGGGCGACTGCCGGAGGCGGGAGCAGGGCCACGCCGAGGCCGGCCGCGACCAGGCCGCGCAGGGTCTCCGCCTCCTCGCCCTCGAAGGCGACGCGGGGGACGAAGCCCGCCTCCGCGCAGAGGTCGTCCGTGATGCGGCGCAGGCCGTAGCCGGGTTCCAGGGTGACGAACGTTTCGTCGGCGGCC # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGATGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCGTGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 261119-262971 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIVO01000002.1 Streptomyces sp. CB02488 scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 261119 30 96.7 31 .............................A AGCTGGGCGCGGGGGTCCGGTACAAGGAGAT 261180 30 100.0 31 .............................. ACGACATCAACCGGGCGGAGCGAAGCACATC 261241 30 100.0 31 .............................. CCGAGATTATTGACGGAGTGGCAGAAAAGGA 261302 30 100.0 31 .............................. TGCCGGTCCAGGTGACGGCCACACCGCCGAG 261363 30 100.0 31 .............................. AGTGGCTGGCGGAGGACAACCGGCTGCACGT 261424 30 100.0 31 .............................. AGTCCGGGCACACAGCCGTCAACAAGACGCT 261485 30 100.0 31 .............................. CTCGCTGTCGCGCGAGCCGTCCGGTGCGAGC 261546 30 93.3 30 ............................TC GGCAACGTCCTCGTCGGTGGCCGGCTCTTC 261606 30 93.3 31 .........A...................C AGGAGATCCGCGACCAGTTCAACTCCTTCCT 261667 30 96.7 31 .............................T GGGCACCGGCCGCGTCCTGCACTCGCCCCAG 261728 30 96.7 31 .............................C TCGACCACGGCGACCGCGACAGCGTCGGCCT 261789 30 96.7 31 .............................C TCTCCTCGTACCAGGGGCGCAGAGCGATCTG 261850 30 100.0 31 .............................. CCACCCCGGACCCGTTGCGGTGAAGAGCCCT 261911 30 100.0 31 .............................. GGTCCTCGGGCAACACCTCCTCCGTCACCGG 261972 30 96.7 31 .............................C ATCCGTCGTGCTCCTCCGGAGTGGAACGGGC 262033 30 96.7 31 .............................T GCTCCGCGTTGGCGGTCTCGGTGATCGAGGC 262094 30 100.0 31 .............................. GCAAGGAGCACGCCCGCCTGGACAAGGCGCA 262155 30 96.7 31 .............................A GAAAGTTGCAGTTGATCAACGGGGCGTGTGT 262216 30 100.0 31 .............................. AGCGGGAAGACGTCGCACGGCGTGGTCTTCG 262277 30 96.7 31 .............................T GCATCCCGGTCGTGTTGAAGGTGGCGCCGAA 262338 30 96.7 31 .............................A AGAATCGAACACGCGACTCATGGTCGTGCTC 262399 30 100.0 31 .............................. AGCCGGGCTCGGACGGGTGGCGCCGCACGGG 262460 30 93.3 31 .....T.......................A CCGTCCTGAAGCCGGTCTTCAGCGCGCTGGT 262521 30 100.0 25 .............................. ACATCGACATCGAGGACGAGGAGCC 262576 30 93.3 31 ............T................A CCCCATGAGCCAACAGCGCTACGACGCCGAG 262637 30 100.0 31 .............................. ACTTCCGCATGTTCGTGTCGATCCGCGCGGC 262698 30 100.0 31 .............................. GTCTCGTGGAGGGGCTGAAAAAGTCGCAGCC 262759 30 100.0 31 .............................. TCCTCGCGCCCGGCCTCACGGGCTCGACGGC 262820 30 100.0 31 .............................. CATAGAGGGGCCGGGCTGGCACCGGACCCCT 262881 30 96.7 31 .............................C TCCAGGGCACCAAGTACGAGGTGCGGATGGG 262942 30 86.7 0 .............AC..A...........T | ========== ====== ====== ====== ============================== =============================== ================== 31 30 97.6 31 CTGCTCCCCGCGCGTGCGGGGATGAACCCG # Left flank : GGAGTCAGGGGCACGGAGAGCCGGCACGAATCAGGATCGTCCTGGTCGTAGAACCCGATGAACCGCCGCCCGTCGTGATGCACGACGACGGAGATGTGCTGGCCCGTCTCGGTGGTGTAGTCGTACTGCACTCCGACTCCGGGCAGCGTGGTGCGGTGGGTTCCCATGACTTCCTCCCGAGGAGCGCGACGCTTACGAAACGCACTTGGTGATCTCTTTAGTCCCGCATTACCCTAACCGGACCCTTGATGGGGTCTTCGGGTTCGCGTTTCGCCCGGGGGCGGACGGCTCGCTCGGTGCGCCTCACTCTCCGGCAGGCGGTTCCCTTCGGGGCACCTTTTGCTCTTTGGCGCCACGGGCGGGCGGTGCGGCGGCGGAGCGCGGCTGGGGGGGGCAGCGCGGGTCCGGGTTAGTGCTGGGTGATTTGCCTGTGTATGCCGGACTTCACGAAGCTGCTTCGAAATGGCAGGATGCGGCCAGAGAACCCGAGGTCAGGCAGT # Right flank : TTGCGCCTCGTTCGGGATCAGGCCCGCCAGGGCCGCTGCCGGCCTCGGGTACGGGCGGGAGATCAGCGAACCGGGCGCTGCGGGTACGACTGTGGGTGCGTCCGCGACCTGGTGCACAGCACCCTGTGGACGTTGACCGTGGCCCCGGCGCCCGAGGCCGCGTCGATATAGATCTGCTCGGCTTCGTCCGGCCGCATCAGCTGGTCGCAGCGGTCGCAGATCACCCGGCCTCCTTGGGGGTGGCGGCGAGGCGGCAGCGGGCGACCTCTTCGTACTCGGTGTGCCTCATCCGCCCGGCGTGCTTCAGCGCCCAGGTGTCAGGGGTGATGTGTGAGCGGCTCGGCTCGGACTCCTCGCCGCAGCCCGGGGTGAGGCAGCGGATCAGGATGACGGTCTGCGGTGCCTCGCCGCGGGGAGCGCCGATCGTCCACTCCACGAACCGCATCACCAGGCTCATGTGCTCGCCCGCGTGGCCTGGGCCGCGCAGGTCGCGGTGTCCG # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:-0.00, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGATGAACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCGTGCGGGGATGGACCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 275816-277980 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIVO01000002.1 Streptomyces sp. CB02488 scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 275816 30 100.0 31 .............................. TTTATGCCTTCCTTTCCGGCGGGCAGATCAC 275877 30 100.0 31 .............................. GGTCCGCGAGCGAGTTCACACGCTCCGGGAG 275938 30 96.7 32 .............................C TGACGTATGAAGAGGTCGTCTCGTCGCTGGTG 276000 30 100.0 31 .............................. GTTCACCCGCCACTACCTCACCCGGAACCCG 276061 30 96.7 30 .............................T CGCCGAGCGGCGCCTGCGCGGCGCGATGCG 276121 30 96.7 31 .............................T CCGGCTCCGGCGAAGGCATGGGCCCGACCTC 276182 30 96.7 31 .............................G TCTTCTCTGAGGCAGCAACTACCTTGGTGGA 276243 30 96.7 31 .............................G ACTGGGTGTCCTGGACGGGCTGGTCGCGGAT 276304 30 100.0 31 .............................. ACGACCGGGAAGACCTCGACCCGATCGAGCG 276365 30 96.7 31 .............................C GGGCCTTGGCGTCGTCGGCGTTGGTGATCCG 276426 30 96.7 31 .............................C AGCCTTCGGCTGCTGCGGAGTGGGTGAGCAG 276487 30 100.0 31 .............................. GGCTGTCGACCTTCCGTCGACCTGGATGCTC 276548 30 96.7 31 .............................C TGTTCTCCAGCCCCAGGCGCGACCAGTACTT 276609 30 96.7 31 .............................G ACATCACATCATGATGGACCTGGTCTGCCGT 276670 30 96.7 31 .............................C GCTGCTGGAGCAGGGCCAGGAGCTGACCTAT 276731 30 96.7 31 .............................T CGCCGTCTAGTGAGCGCGGAATGCGGGGAAA 276792 30 96.7 31 .............................C AGCGGGAGGCGGCGGCGGTGGCGATTCCGGA 276853 30 96.7 31 .............................G CCGCCGGCCAGTCCTACGGGCTCGGCACCTA 276914 30 96.7 31 .............................G TTCCGTGGGAACGGCAAGCGCGGCCAGTTCT 276975 30 100.0 31 .............................. CCTTCTGCACGGCGTGGTGGGCGTCGCCCTT 277036 30 96.7 31 .............................G TGGGGGCAGACTACGGTCGGGAGATCCTGGG 277097 30 96.7 31 .............................G CAAAGCCCACCGGGACGCCGCCATACGCGAG 277158 30 100.0 31 .............................. GCACCAAGCCGTCGCTGGGGAAGTCTGGTTC 277219 30 96.7 31 .............................C CGGTCCAGATCTACACCCGCGGCGCCGCGAT 277280 30 96.7 31 .............................T TGAGGAGGAGGCGTTCCTTGTGTTCGCGGGC 277341 30 100.0 31 .............................. CGTAGAACGTGTCCATGGTCTGAGTGCCCGT 277402 30 96.7 31 .............................C GGGCCCCACCAGGCAGTTCCGGCAACACGCC 277463 30 96.7 31 .............................C GTCCCGGGACGTCCACCTCCCGGCCTGGGAC 277524 30 100.0 31 .............................. TCGGGGGGAGCGCGGAGTCCGGCGACTGGAC 277585 30 96.7 31 .............................T CCTCGGGCACCACAACGTGGACCCTGCCGTC 277646 30 93.3 31 ............................AG ATCGGCCATGGCCGAGCCTCCTGGTCTAGTC 277707 30 100.0 31 .............................. TGTTCGGGATCATCGCCGTCGTCGGTGCTCT 277768 30 96.7 31 .............................G TCACGAAGGTCCAGGAGGACGGCGCGCGTGC 277829 30 96.7 31 .............................G CGCCCTGTTCGGCATCGGCGGGCAGGTCGAG 277890 30 96.7 31 .............................C AGCCCTGGAACCAGGGCAGTCCGAGCAGCAC 277951 30 83.3 0 ............AA.......GC......G | ========== ====== ====== ====== ============================== ================================ ================== 36 30 97.1 31 CTGCTCCCCGCGCGTGCGGGGATGAACCCA # Left flank : GGTTTCCTCACGCGCTGGCTCCTGGAAATCTCCCCGGGCGTCTTCATCGGCGGCCCCTCCACACGCGTGCGGCAGGCGCTGTGGGCGGAGGTCAGGCAGTATTCGGGCCAAGGGCGAGCCCTCCTTGCGTACAGCGACAACAGCGAGCAGGGGTACGCCTTCGAGACCCACGACCACAAGTGGCACCCGGTGGACCACGAGGGCCTCACGTTGATCCTCCGCCCGAAGGACAGACCGCCGCCCGCTCAGTCACCACCCACCAAGGGCTGGAGCAAGGCCGCGAAGCGGCGGCGGTTCGGGGGGCGTTGAGGGCGGCGAGACGTCTCCTTCGCGGAGGCTGCTCGAACCCGGTTCCAGCGCGGTCATCCTTCGCTGCCTGCGCCTGTCGATGACCGAAGCGGTGGCGGCCGCCGGAGGGCGACGAGAGAGGTGAAATGTCCGAGTTGCTGAAGCTGCTCGAATTTGGCCAGTCGGTCGGATAAACCCGCAGGTCACGGAGT # Right flank : GCGTCGAGGCCGCCTCAGCTTGAAAGCGTCTTCACGTTGGGCGGAGGCCTCCGTCGCCCAGACATGGGCGCCGGTTCATTCACCCAGGAGGCAGGGGCCAGGAAGGGCCTTCTGGGTTCCGGTACCAGGCGTGCTGGCCTTCGGGCGTGATCGTGAGGCCGAAGTCCTCTCGGGCCGGGGTTTCCTCGGGGAAGGTCGCGGCCAGTTCTTCCACCGTGTCCCACAGCCGTTGGGGGCCGAGCTGGCGTGCCTTGCCCGGTGCGTGGACCGTGGCGGTGGAGCCGTCCCCGGTCCACAGACCGATGCCGGTCACCTCACCCGCCTTGTTCTGCCAATTGCACGAGTTGTATCCAGGCAGTGCCAAGGAGAGCGGGAACTTGAGCCGGTCGAGTACGTCCGTTGCTGGGACTGTGGTGGGCCGGCCGGTCCTGGTTTCCAGCGAGGTGAAGTCGGGGGCCTTCGTGAGGGTGCGGCGTGGCATGAAGAACGCGGGTACGGGC # Questionable array : NO Score: 5.47 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.36, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGATGAACCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCGTGCGGGGATGGACCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 281318-282321 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIVO01000002.1 Streptomyces sp. CB02488 scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 281318 30 96.7 31 .............................T CTGCCGGGGCTGACGTCGTCGGCTCCATGCT 281379 30 100.0 31 .............................. ACATCGAGACCCGGCTGATGTTCCGCGCGGA 281440 30 96.7 31 .............................C ACCCGACCACGGCCGCGCAGTACCGAGCACA 281501 30 96.7 31 .............................T CGTGGACGAGGTCTACCTCCGTGCTGGCGTG 281562 30 96.7 31 .............................C ACGACCACACCGTCGGCACCTGCCACCTGCA 281623 30 96.7 31 .............................A CGTAGCCGTTTTTCTTGATCAGGACTCCGCC 281684 30 96.7 31 .............................C TGGCGGTACCCGTTGCTGGAGCCCCGCATGT 281745 30 96.7 31 .............................A GCCCGATCCCCGTGTTGCAGAGGTTGCACAG 281806 30 100.0 31 .............................. CCGCAGGGACCAGCTGGACGCGGCGTCGGCG 281867 30 100.0 31 .............................. GCTCACGAGCCTGGTCCCGAGCGCCGATCAG 281928 30 93.3 31 .............A...............C AGTCCGTCCACCGGATCTCGCCCTCGACCTC 281989 30 96.7 31 .............................T GCGTCTGCAACGCCCTGGTGGACGTCCAGCG 282050 30 93.3 29 ............................GC GTCGTCGTACTTCTTCTCAGCCTCCGACG 282109 30 100.0 31 .............................. AGCTGCACACGAGGCAGCAGGCCGAGAAGGA 282170 30 100.0 31 .............................. AAATGTAGGTGGTGTACCGATCGCTGAGATC 282231 30 96.7 31 .............................A AGCCGGCGATGACCGCGGCGATGGCGATGAG 282292 30 96.7 0 .............................C | ========== ====== ====== ====== ============================== =============================== ================== 17 30 97.3 31 CTGCTCCCCGCGCGTGCGGGGATGAACCCG # Left flank : CACGCGAATGCCGTGTTGGCCCAGCGGCAGTTTGAGTTCGGCCATATCGAGGAATCGTGCGCCTCGTGGGAGACATTCCTCAATGACTACATGGTGCTTTCCACGGCCCGTGGCGATGAGCATTTCGATAAGATGCGAAAGAGCCTCGCCAGGCACCGGGATTCCCGGGCGGTTCGGGGGATGAGTGATCGGATTCGCCTGGTAGCCGCGATGAAGGCCTGAGTTGCGGTTCGAAGGATTGGTCCTCCCTTGCCTCAGGTGGAGGCCCTTGCGTGGGCCCTTGCACGGGAGAGGGATCGCTCCTTCGCTAGTCGGGCTGATGGAGGGGGATGGGCTGGGTCGGTGAGGAGGGCTCGAGCGCGGGGGCGGTGATGAGCGCTCCAGCCTTCAGAGACCGAGTCGGTGACGTCGCGGAGGGTGGCGAAAGAACAGAAATGTCCGAGTTGCTGAAGCTGCTCGAATTTAGGCAGTCCGTCGGATAGACACGCAGGTCACGCAGT # Right flank : CAGGGCCCCGTCGCGCATACGTAAGGACCACGCGGAGTGGTCACCGCGCGTATGGCCGCTGGCCAGACCCCAGGAGGCCCTTACTCGATCGGGCCACGGCATGGCAGGGCGTACTCAGCCTCGCCGGCGCAGCGCCCGTCGCAGTGGTGACCCATAACCAGGTGCCAACCGCGGCGCCCGGCAGTCGGGGGCGTCGGCAGGGTGAGCCCAGGCGTCAGGTCGGGCTCCGCTCATGGAATCGGAGCGGTCGAGTCGGACCGCGTCACCGATGATCAGCTGGTCGCAGCGTCCACAGATCATTGCCGCACCTGCTTTGCCTCACGAACCGCGCAGACGGCTACGTCCGAGCAGGCCCGCGGGAACCACGAGTAGGCAGCCCCATCGCTCGGCCGTGCGCGCTGCTCGCCCAGGTCGACGTCGGCGCCGACCGTGAGCGGGTACCGGCACCAGACGCACCGCCATCCACGCTGTTGCTGCATGGTGAGCTCGTTGACGGGTGG # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.44, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGATGAACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCGTGCGGGGATGGACCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //