Array 1 685472-683060 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012357.1 Spiroplasma litorale strain TN-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 685471 36 100.0 30 .................................... TCTATACTAACAAAAACATTCATAAAGGAT 685405 36 100.0 30 .................................... TGAAAAATAATTGCTATAATTTCTTTTGCT 685339 36 100.0 30 .................................... TAAAACAAAATTTATTTTAAAAGTTGTTTG 685273 36 100.0 30 .................................... TTTATTTTAAGATAATTATAGATAAGTTGC 685207 36 100.0 30 .................................... ACGTAACATATGTAAATGTTGCTAGACATG 685141 36 100.0 30 .................................... AGGTGCAATGTCAATTATTTCTGGAATTGG 685075 36 100.0 30 .................................... ATCTGTCATCTCTCATATGATATACATTAC 685009 36 100.0 30 .................................... ATCGGGTTTTTATTTTTGGTATCTCTTTGT 684943 36 100.0 30 .................................... TTAAAATAATGAATGTTTTATTAGACAAAT 684877 36 100.0 30 .................................... TTTCAAATCTTCAATGGATAGATTTCATAT 684811 36 100.0 30 .................................... GGCTATGCAATTCCTAAAATAATATATGAT 684745 36 100.0 30 .................................... CGGTATGAGTTGATTTCCAAAAGAAGGTGG 684679 36 100.0 30 .................................... ATAAAAAAGGTTGATAACTATCTTTGCTAA 684613 36 100.0 30 .................................... TAACTTCTATAAAATAAGTTATTTGTCCTC 684547 36 100.0 30 .................................... CTCTGCAAAATCTAATAAGAGTGTAAAAGT 684481 36 100.0 30 .................................... AAAGAAAAATGGAATGATTTAAATACAATG 684415 36 100.0 30 .................................... GATACAGATTGAAAAAAGTGAAATTCCACA 684349 36 100.0 30 .................................... TGGTTGTCTAATTCTATTTAAATCACACAT 684283 36 100.0 30 .................................... ACAATCAAGCCCTTTATTTGATAAAATGCT 684217 36 100.0 30 .................................... AAGTTTTGATTATCTCACCATTTTTTTATT 684151 36 100.0 30 .................................... AAGTATGAAATAAGATTTTAATTAGTTGAG 684085 36 100.0 30 .................................... ATTAAATCTGGGTTGCAAGTTGTGATTCTA 684019 36 100.0 30 .................................... AAGTTCACTTTGTTAGCATTAGGAACAGGC 683953 36 100.0 30 .................................... CAAAGATGCTAATAGTTCATGTTCATTAAC 683887 36 100.0 30 .................................... ATATCACACGTTATCACAAACAAAAATGGT 683821 36 100.0 30 .................................... TTGTCAACAGTTTTGAAAGTACAATAGCAG 683755 36 100.0 30 .................................... GTCATTATTCTTTTTCCTTTCTTTTCATTA 683689 36 100.0 30 .................................... GACGAAACACTTGACCCAGACTCAACTGAA 683623 36 100.0 30 .................................... TTTCAACAACAGTGTCAATTCATCTATTCA 683557 36 100.0 30 .................................... AAATAAAAACCCGATACCAACTTACAATGT 683491 36 100.0 30 .................................... TTTGAATTATGTAGGAGCAAACGGAGTTAA 683425 36 100.0 30 .................................... TTTTTGGTCAAATAAATATGAGCGAGGTTA 683359 36 100.0 30 .................................... TTTTGCATTATTTGGTAATTCGAATTTGTT 683293 36 100.0 30 .................................... AAACAAAATGAAGCAAATAGCTTCTTGAGA 683227 36 100.0 30 .................................... AAAATCTTTATCTATTGCAAAAGAGATTAT 683161 36 100.0 30 .................................... CAAACTTTGAAGGTTTAGTTTTATTAATGG 683095 36 91.7 0 .............................A..A..T | ========== ====== ====== ====== ==================================== ============================== ================== 37 36 99.8 30 GTTATGGTACCCTGTAAAATTATGTAGTAGTAGAAC # Left flank : CTGAACAAACAATATTTAAAATTAGTTCAATAAACAGTGAAGAAAATATAATTAATATGTGTCAAAGTAAATTAAGAAAAATTTATTTAGAGCTAATTAAATCAATAATTAATATTGAAGACAAAAATATACATTTATTATTTGTTAATCCTTTTAATTTCCTAAATTATAAAGAAATTGTTGAATATTATAATGAAATTTCTAATATATCAAAATATACAATAATAACAGATAAATTTGTATATTGTGATAACATTAATAATAGTATTTTGAAAGTTTGATATGATAGTAACTTTTTAGATTTTTCAAATATTTACGATAATATAAAATTTTACATGAATTTTTCAAATTTAATTAGTGAAAATGAATTTATAGAAGAGTTAAAAACTAATATAAATAAATTAATAAGCAGTTATAATAATGAATTAATTGAAATAAACTACCCTGTTTTCCAATATTTAATAAATAATTAAATAATTAATAAAAAGTATTGATTTGAG # Right flank : TAAAAAAATTATTAATATTAAAATTTAAGGAAATAATTGTAAATACCATAGCAAATATTTTTTTAAAAAGTCCTAAATGAACATCTAAAATAAAATTGACAGTAAAAAAGTACTTTTATTGTTAAAATTTTATTGAAAGGTGTTCTTTTTATATGGCAAAACAATGAACAAAAAACGAAAAACTTAATATAATTAAGGAATCAAAAAAATGGGTATTTTAAATGCGGCATTAAAGTTTGATATTAGTACTAGCACAATTAAAAGATGAAAATCAGAGGTAAAAGTTAAAGGTGAAGGAGCCCTTGAATGAGGTAGCGGAACACAGGCAAAAGGAAATATTAAAAAATTTAAATCTCATGATTGAATTTTTAAAAAACCTGATGATATGAGCATTGAAGAATTAAGAAAGCTTTGAAACTGGAACGAGCTTTAAAAAAGCATTTGGCGAAGACGACTAAGGAAAAGTACTTCGCCATTTTTAATGTTAAAAAAATGTTTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATGGTACCCTGTAAAATTATGTAGTAGTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTATGGTACCCTGTAAAATTATGTAGTAGTAGAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [88.3-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //