Array 1 2001-746 **** Predicted by CRISPRDetect 2.4 *** >NZ_HE972523.1 Microcystis aeruginosa PCC 9432, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 2000 36 100.0 36 .................................... AATTTAGCCCCAGAAAAGTTTCCCGTATCACCTACA 1928 36 100.0 35 .................................... TACTATAGTCGTAGTCGCGTGCGCTTTATCTAATC 1857 36 100.0 34 .................................... AAGAGACTTGGGCAGTCTCAACAGATCAAGACCC 1787 36 100.0 36 .................................... GGCATATTTCCCGCCGTTATTATGGTATCCGTTCTT 1715 36 100.0 35 .................................... TTATATTATATGTATAGGGCTAAGGTATAAAGTAC 1644 36 100.0 36 .................................... ATCTTATTGAAAGATAATGATGCAGCCTGCATAGAT 1572 36 100.0 38 .................................... ATTAAAATATTAGCAAAAGTATCCGTGAAAAATTGCTC 1498 36 100.0 35 .................................... ATTAACCGCCCTATTCCCACGCCTCCCCCTTTGAT 1427 36 100.0 37 .................................... GGATTAGAGCCGGCGATCGATTGTAGTCGGGCTATTT 1354 36 100.0 36 .................................... CCAGAAAAAGATTTAATCGCATTAGGAGCTTTCATT 1282 36 100.0 36 .................................... GCGTAATCCTTACTGCTGGCTGTGACAAAACTTACA 1210 36 100.0 35 .................................... GTACAACTGATTGAAGCAATGGCAACAGACCGCGC 1139 36 100.0 35 .................................... AATGGGAAGACTGGTTCATGGATGTCTATGATTTT 1068 36 100.0 35 .................................... TAATTAGAGAAAATCATCCGAACCATGACATTAAA 997 36 100.0 35 .................................... AAGTTAAAAGACGGACAGAAAAGATTAGAACCGAA 926 36 100.0 37 .................................... TTTAATCCAATCTACAAGCCCAATCAATTAATTGTCG 853 36 100.0 36 .................................... AAAATCTAAGCGAAAAAGAAGCGGCTAGGTTAGCTG 781 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 18 36 100.0 36 GTGTACTAACCTTTGATGCCGTAAGGCGTTGATCAC # Left flank : GTCCGCAACGCTGGCGTAAAGCTTACAGAATTTTAGGCGGTTACGGCGATCGCATTCAATACTCGATTTTTCGCTGTTGGTTAAGTGCGCGAATGCGAGAAAAATTGCGCTGGGAATTGGAAAAAGTCCTCACCCTAAAAGACGACTTAATTTTAATTCGTCTGTCGGAGCAGTGTGTGCGCGATCTGCCTAAGTACAACCGACCTGACACATGGCTTTTGGACGAAAAAGGGTTTCGGGTAATCTAAAAAAAACAAGCATATCTGGCTGGGAAAAAATCCACGGGCTAAAATTTATTTGTATTGCCAATGCTGTCTCGATTTCAAGGTTTGACAAGGAACAATTCCTGCTTGCATTTTCTGAAAGTCTTGCTGAATAACGGTTTTCAGCTTCGGTGCTGTCACTCAAAAGCTGTGATCAGGAGATTTCTTGGCGTTTTTCTAGAGGTGCTTGTAAAATGGACTGCGAAGCTATACACCAAAGGCCTTTTCAGCCTCGCC # Right flank : TCGGATATTTAAGCTTTGACATAGACAAAAATGCAAAGACCATGGCCAGTAAACGATCGCTTTTTAGAACTTCGTTCTCATTGGATGACCCTGATCGGGGAACATCTACAAGACGATCGAGGACAACTATTAGAATATTGGCGGGTTGAAAAAGCCGATTCCGTTATCGTTCTGCCCGTTCAAAACTCGATGATACTGCTGCCCGCTCCCAGTTATCGCCCCGGACTGGGACAAATAACCCTTGATTTCCCCGGTGGTCGGATTTCCGAGGGGCAAGACCATCACGAGGCGGCGTTGATGACTCTAAAACGAGAATTAGGAATTGAAGCAACGGCAATGACCCGATTAACTCCCCTAAACAGCGAGGGTTGGGCAGTAAATAGCTCCTTTTCCAATCAGAAACTTTACGGTTTTATCGCCGATATCGACGGCGACCTATCTACCGGCGAAGTATTGACCTATCCCGCTAATTCGATTGGAGTCAGCGATTTGTTGAAGTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTACTAACCTTTGATGCCGTAAGGCGTTGATCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 1 100941-104686 **** Predicted by CRISPRDetect 2.4 *** >NZ_HE972538.1 Microcystis aeruginosa PCC 9432, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 100941 36 97.2 37 ..................................G. TGTCAGTTATCAGTAAACAAATTATTTAGGAGTAAAA 101014 36 97.2 36 ..................................G. TAGCTCTGCTGTTGATGTTCGGGGTTCGCCGGGATT 101086 36 97.2 34 ..................................G. CTAATGCTTTTAGATTTGTCGCTTTTAGCTTCTA 101156 36 97.2 37 ..................................G. CCCGCGTGTCAATCGCCAATTCTCCTGCGGGGGAAAT 101229 36 97.2 35 ..................................G. CAAACATACGGCGATTACGCTGGTTTATATTTACC 101300 36 97.2 35 ..................................G. TTAAGGATCGAAAAGCTTGAACTGGAACAGTATCA 101371 36 100.0 35 .................................... ACAGTTTATATCACTAAATATGCTTTGACAAGTGG 101442 36 100.0 37 .................................... TCGCTCAAGAAACCGACGGCACTGAATATCAATTTAG 101515 36 100.0 37 .................................... TCGAAAACGTCCCCGGAATCCTTAGCTGTCCCTTCCG 101588 36 100.0 43 .................................... AGAAGAATCTAAAAAACAGTTATCAAAGATCGTTACCGAATTA 101667 36 100.0 38 .................................... TTTGAAAAAGTCTATCATATTCCTTATTATCAGGGCGG 101741 36 100.0 36 .................................... AAATCAAGCACAGCAAGTGGTTATGTCGAAACTGCA 101813 36 100.0 36 .................................... TTGATAGATTGTTCCCGATGACATTATTTTATCGGC 101885 36 100.0 35 .................................... AGAGTGACCTTCCGTTTTAGGAGTAAAAACAATGC 101956 36 100.0 41 .................................... TTAGATACAAAAGGTGTTGAGGGGATGTTTTTTCATATTAC 102033 36 100.0 36 .................................... TGTAGAGGGAGGAATTGCACCTCCCATTTTAGGAGA 102105 36 100.0 40 .................................... GAAGACGAAGGTCTTTTGTTTGAAAGCAAAGTGATCGCGG 102181 36 100.0 36 .................................... TTGTATAGAGTGTTTTTTAGATTTAAGACCAATTTA 102253 36 100.0 36 .................................... AAAAGTGACCGTGTGGCGCGGTGGTGATGATGATTA 102325 36 100.0 36 .................................... TTGAAGGTAAAAAAGGAGAAGTGTCAGCAACTTTTG 102397 36 100.0 35 .................................... ACGGCTCGCGTTCACGAACTAGAACAGAAACTCAA 102468 36 100.0 36 .................................... GACACTTCCTAAACTGTCCACCCCAAAAAAGGTTGA 102540 36 100.0 36 .................................... CAGACAACCGAGATTTATTGATAGATGCTATAAGTG 102612 36 100.0 37 .................................... GAGATGAGTGTTAATGGTTCTGGTACTGGTTCTGGTA 102685 36 100.0 37 .................................... GTTTACTGAAATGTCCTACACCCTTTTCTATATATAT 102758 36 100.0 39 .................................... TCGCAATTAGTGTCCCACCATCATTAGCAGAACTTCTAA 102833 36 100.0 39 .................................... TTATCCTAATACATTAACTCTTGACAGACCCTAAAAATT 102908 36 100.0 38 .................................... CTAGTAAACCCTGATATAGTAGTAACATACCAAACAAG 102982 36 100.0 38 .................................... AGTAAACAATCTGTCTAAAGGTGTAGAATCTGCCATAA 103056 36 100.0 37 .................................... TCAAACTATCAACTGGCTAATTTAATTCTAGGACAAA 103129 36 100.0 39 .................................... TTGAAGACCAAATGAATCCAGAGCGACGACCTAAAGTAT 103204 36 100.0 35 .................................... TAGTTTTAAAGCTTGAGGCTGACATTACCGAGCTT 103275 36 100.0 39 .................................... AAGAAATTACTCTAGACAGCACGGAATTAATGGGTATTG 103350 36 100.0 38 .................................... ACTGTTTTAACCTATCAGCCTCCCATATGTAAAACGTG 103424 36 100.0 35 .................................... CAAGATGCCCCTAACTACTTAGGCACAAACTATGA 103495 36 100.0 37 .................................... TTAACCCAGTCTTAACCCATCTTAACCCAGTCTTAAC 103568 36 100.0 35 .................................... CCGAAAAATTTGTACAGGGGAAAAGTTCGAGGAAA 103639 36 100.0 35 .................................... ACAGCAGCGCTCTACAGATAATGGTAAAAATTGGG 103710 36 100.0 37 .................................... GAGAAATCCAAAGCATCTCCTATCAAGAGGTATGTTA 103783 36 100.0 35 .................................... CTAATAGGCTATGGAAGATACGATAAATCATATTA 103854 36 100.0 36 .................................... AAAAGTATCGTCGTCTTATTGACGATATGAACAGGA 103926 36 100.0 39 .................................... TGTGATAGAATTGCTAACAGACATAAAACTATCACTCTA 104001 36 100.0 38 .................................... GAACCGATGACAGACCCGACGACATGGCAAGAGTTTTA 104075 36 100.0 36 .................................... TGGACAATATCGGAGTTCTAAACAAGAATCTGGGGA 104147 36 100.0 37 .................................... AATTGTTAGAAAGATAGGGTTTATACAGCTACATCTA 104220 36 100.0 35 .................................... GAATTGAGGAATTTCACCCCTACCCGAAAAATACA 104291 36 100.0 36 .................................... AAGAAATCTTCTCTTCCCACTCACTGACAGTAATCT 104363 36 100.0 34 .................................... ATTAAAAGCACGATTTAATGTTCTGTACCCCGCA 104433 36 100.0 37 .................................... GTGAAATGATATTTTTCTCTATCGGAACATTGGCATC 104506 36 100.0 36 .................................... TTCTAAATAATCCTCTAATTCCTCTTTTTCTTTTTG 104578 36 100.0 37 .................................... TCACAAAAAATTTGGGTTACAAGGTACACCTTGTCAA 104651 36 97.2 0 ....T............................... | ========== ====== ====== ====== ==================================== =========================================== ================== 52 36 99.6 37 GTTTCCATTCAATTAATTTCTCTAGCGAGTAGAGAG # Left flank : AATACTATGTAACACATTTCCCCAGGCTTGATAATGGGGGGCTTCTCCTAACATAATTGCTGTCGCTTTTACTGACCGGGGATGGTCACTAGATAAATGTTCGGCTAAGGGAGTTAGTATAAACTGTTGAGATTCAGTCTCTTGAAAAATTCCTACACTAGCTAATGCTCGCATCAGTCGGTATAAAGCAGCAGGATTAGTCTCAGTTAGGGAGGCCAAATCTTGACAGGATTTCGCTCCTTTGCTTAAATGCTCGGCTAGACTTAATTTAGCCGCAGCATAGATGGCCTGAGATAGCCAATAACCCGAAACCATTTGGGTTAATTGAAGATGAAGAGGGAGTTCAGGTAAGGACATAAGCAACTTTTGTGGGAATATAATTAAACATTACCATATAGGATAAGCTGCCCGCGCATTTAAATCGTCTGTTGAGATTCAGCTAATGTCTAAGCGCTAGTAGAGAGTTATCGCTACAAGTGCAGTAAAAAATTAGCCGAAAA # Right flank : GAGCCGGTAGGCAAACGTCCGAACAGGATTGGGGTTCGGAAGCCAGTTGCGACGGATAAGTTAATTATAGCTAGATACGGTCGCACAGTCAACCCCATAAACCACAAAACCCTTATCCTGTGGTAGATCGAGGGATTTTACCAGAAATCGAGGTTATCTGCTCCCAGCCCTATCCGTCGCTAGTCGATGATACCGAATCAGATGATCGTAGAACTTGGCGGTTTAGTTAGCGGGACACCGCCTAAAGTCTCTATTTGTGCTAAAGTATGGCCAGAGATGGGGTAAAATCGAATACTATCCTCGTTTTCTTTGATTTGCTTTTGCAGGCGTTCTCTTAACTGATTGTATAGAGATTTGCTTAAAACACACTCGAAAACTGAATACTGAACCCGTTGGCCGTATCCTTCCAGCAAATCAGCCACTTTTTTACGCCTTTTATCGCAGGGAATATCATAGGCAATAACGTAAAATAACATGATTAGCGGATCAAATGAGGCTGA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTCAATTAATTTCTCTAGCGAGTAGAGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 1 121621-122022 **** Predicted by CRISPRDetect 2.4 *** >NZ_HE972554.1 Microcystis aeruginosa PCC 9432, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 121621 36 100.0 37 .................................... CGATGCTAGACCCCCGGTGTCTAGTACGTCCCAATAA 121694 36 100.0 38 .................................... AGGATATTTCTACGCTTGTGGGGATAGCAAAGGGATCG 121768 36 100.0 37 .................................... TCCCAAATACTGATATTGAGTTATATTACGACGGTGA 121841 36 100.0 37 .................................... TTGTCTTGCCAGAGGAAGCAACTGTAGAGGACTTTCG 121914 36 100.0 37 .................................... ATAAGTTTCGCTCTATGGGCATTGTCCTGGGTGAACC 121987 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 6 36 100.0 37 GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Left flank : GCTTCAGCAAACGAACCTGAGTGATCGCACTAATTCCTAGAAGGCTTAACGCGACAATTTATAGCATTTTTATCGATTTTTGTCAAGATATATTTGACACAATTTATTAGAAAAAGGGTTTCTAATTAAAGAGGGCGAATGCAATTCGCCCCTACAATAATATTATTATTATTGTGCCAATGGTAGGGGCGCATCGCGTGCGCCCAGAATGTCCTAAGTAGGTAGGCACAATTATTTGGGCGAATGCAATTCGCCCCTACAATAATATTATTATTATTGTGCCAATGGTAGGGGCGCATCGCGTGCGCCCAGAATGTCCTAAGTAGGTAGGCACAATTATTTGTAGGATGGGTTAGCGGTAGCGTAACATAATCGGGCGTTGGGTTTCATGCTTCAACCCAACCTACGTTCATTTTATATTTAATTCCACCCACCTACTTATAGATATTTCGACAAAATTGAAAGGCAGAAAAAGGGTTTCTTTATAAACCCTTTTTCTA # Right flank : GAGTACCCCTTGGAAAGTCTCATCGAGAGGGGAAGACAGACCCCCAAATCGACGCATCTCCAAAAAGGTGGTCCTGGGGGGGGTAAAAGTCCCGATACCAAAGGGTAGAACCCTGACTGGGAGAGCAATCGACGCACCTCAACCAGAGAATCGGGGTTTTAGGTCGGGGAGGGGGTGCATCGATTTTCAGTCAAGAGTTAGGGGACAAGCTAGATGATGTAGAGATTTGGGGGTGGTTGAGGAGGAGAACCTCCCATCACCAATAATCTAGAGACAGCTTCTTCGGAAATCCCATAGAAGCGCACATCATCCTCTTGAGGATTGACCCTTTCTACTACTTTAGCGTACAGTTTCCGCCTCTGGATGTGTAATTAATTTTGCTTAAGTAATTATCTGTAATTAATTGTCTAGCTACTGATTAGGGAGGGTAGCAGGGGTGGGAGTTTTTTTTAAGGATTTTTTAACCCCCAAAATCCCCCGATTCTGGCGAGCAATCAGTA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.70,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 131710-130789 **** Predicted by CRISPRDetect 2.4 *** >NZ_HE972563.1 Microcystis aeruginosa PCC 9432, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================ ================== 131709 35 100.0 34 ................................... TTGAAGATCGGTTGCCTTGTCATCAAATAGAACT 131640 35 100.0 37 ................................... GTTTCTTCTAGGTCACTCAGTGTTGCACTGAGTTGGT 131568 35 100.0 37 ................................... TTATCAGCTATATTCAAGCCGTTAAACCTAACCCAGA 131496 35 100.0 40 ................................... AGTAGCTCATTCATTGCTTGGCGATTGCCACCAAGAAAAG 131421 35 100.0 39 ................................... ACAGGAGCGACGGGTTCGACTTCAATCAGCTGCAACTTT 131347 35 100.0 44 ................................... AAAGAGCTCTTCGATCAAGGCTTTTTGAGAGGCGCTCAAGGCTT 131268 35 100.0 42 ................................... AATAACCACTTGATAAATCTGACACCATCTTTATTGGGTGCT 131191 35 97.1 36 A.................................. GGTTTTGGGCATCGGAAAAATTTGAAAATTTTTCTT 131120 35 100.0 37 ................................... TTATCAGCTATATTCAAGCTGTTAAACCTAACCCACA 131048 35 100.0 37 ................................... TCTAGATCCATTTCTGGGGAAGAAGAAACAGAAGAGA 130976 35 100.0 44 ................................... TGCATCTCGATGACCTGATCGCTTTGCATCAGTATTACTACTGA 130897 35 100.0 39 ................................... AATGTGTAGGGTTAACTCATGAATTGACCCTACAATTTT 130823 35 80.0 0 T..AA........A..T......C.....A..... | ========== ====== ====== ====== =================================== ============================================ ================== 13 35 98.2 39 CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Left flank : TCCATAGGAACAGTGATCAGTTAGGGACTTGCGCTTTGATAATGTACCTTTTGGGCGAACGCAGTTCGCCCCTACATTGTGGACAAAATCCGTTACTGTAGGGGCGCAATGCTTGCGCCCTCCGATCGCTCAGGTTTGCTGATCACCCTAAGTAGGGCGAGAGCCTTCGAGAGCCTCCGCAGGTTAGGGACTTGCGCTTTGATAATATGCCATCTGGCTGGTCTGATTCTTCTACAGAGCGATTTTCTGGCTGGGATATTATTCCCACGCAAGTCCCTTATCAGTGATCAGTGATCAGTTATCAACATTTTTCGCGGGTTAGACACAATGGCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCCTTGTCCAGTAAGGCTTTGAGCCTCATGACTGAGGTGACTATTGAAAATTATTATTAATTATGGCTTATTTTTCAGTATCCCAGGAAAAATCGTTGTACAATCCTTGTACAGCCTAGTTTTGCCAAGCTAGT # Right flank : GATACTTAATTAAGAAAAATCAATGAAAATAAAGATTGTTTAAGAAAAATTATTTAAAATTAACACAATAATTAGAAATTTAGTAATAGATATAAAAGTACAAAAGAGCCAATTAATCTAACAATCCTATTTTTTTAGCCAGAGATAAGTCTTTTCTAGGTCTTTTCAAGGCTGTTGAATATACCTCTTAAACAATCGAGTTTTCTATAGCTTTATGCCCAAATATATAGCCATCACCTTCTCCCCCGTCCAAAGCTTTATTGAAAAATCCCGCAAATTGAGGGACTTGTACGGAGCCTCTCAGATTCTCTCGGATCTGACCAGTACAATCGTCACCCACCGGCCCGAGCAGTACCACCTAATTAGCCCCGGACTGCTAAACTCCCAACAGGGAATGCCCAACCGTGTTCTCCTGAAAATCGATAGCGAAATACAGTCCTCCTCCTCCGAGGAAATCATTGCGGAACTGCAACGAGCCTTTTTAAATCGTTGGAAAAATA # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [86.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 134086-134773 **** Predicted by CRISPRDetect 2.4 *** >NZ_HE972563.1 Microcystis aeruginosa PCC 9432, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =========================================== ================== 134086 35 100.0 33 ................................... TCTGCTGGAGAAGGGTTGTATCTATGACGGGGG 134154 35 100.0 37 ................................... TTGGCTGGACTATATTTATCCAAGACACGATACGTTG 134226 35 100.0 38 ................................... TTATGCATCTAATGGTCCTGTGGGGGCCATTAGTGGTT 134299 35 100.0 40 ................................... AAATGCCTATTGAGCAACTCAAAATTGAGACACTCGAAAA 134374 35 100.0 37 ................................... TGGCTCTGCTGAATTGGCAGCAGTTTGCGCGCTTCTG 134446 35 100.0 43 ................................... AATCACTTTATTCCAAGTACTCTAGCCTCCTCACCAACCTCAC 134524 35 100.0 37 ................................... AATCATACGGAAGCCGACTATAAACTCATCTACAGGG 134596 35 100.0 36 ................................... AGTTCATCCTGACAACCTCACAACTTAAAGAAATGT 134667 35 100.0 37 ................................... CCTGCAGTAAGAAGAGACTGGGGAGGCTCGGTAAACC 134739 35 97.1 0 .................C................. | ========== ====== ====== ====== =================================== =========================================== ================== 10 35 99.7 38 GTTTCCATTCATACGCTTCACGAATTGGAAGCAAG # Left flank : AAAATCCTTTAAATGTGATTATTTGGTCTTTTGAAAGTGCGATCGCTACTTAGGGTTTGCTGAAAAAGTACGGGCGAAGCATTCGGATAGAAAATCTACGGTTTCACCGATAGGTTACTGCCCGAATGCTTCGCCCCTACAGGACGCGGGCCGATGAAGACGCAAGGTTTTGAAGCACGATTCTCTCAAAATCTTGCACCTGTTTCACGAGAAAAGCCACAAAACCCTGACCTTGCCTACATTTCACATTTATTCAGCAAACTCTACTTATGAGGGGTTTGTAGCCAGTGGAGAACTCGATCGAGATCGAGTTGAGTTGTAGATCGGGAAATTGGCTATTATAAACGATGCCCAAAAAATCATCTCCTCCCGCATAAATTATTCTGCCGAGTTCAGTCTGGTTAAACTTCCTCTGAAATTGTTGTCCCCACTGACGCATAATCTCGCTGAAATCTCGGATTTTTCTTAACCGATGAGATGGGATTGATCCCTGGCATTCT # Right flank : GACTAGCTTGGCAAAACTAGGCTGTACAAGGATTGTACAACGATTTTTCCTGGGATACTGAAAAATAAGCCATAATTAATAATAATTTTCAATAGTCACCTCGGTCATCAGGCTCAAAGCCTTGCTGGACAAGGCATCGACGCACCTCAACGAAAACTCTAGATTTTCAGCCATTGTGTCTAACCCGCGAAAAATGTTGATAACTGATCACTGATCACTGATAACTGATCACTGTTCCTATGGACTAATACCCGCAGATTTAAGGGTCTTGTCCATTAAAATTACATGGGTACTGCTTTCCTGTCCCTCATTGTCAGCACGACGCTGAATATAACTGCCATCGGATTGTAATTCCCATGCTTGTCGGTTATCTGACAACATAATGCCGAGAATTTCTTCTAGTTCCTTGGCGATCGCTGGTTCATCAATGGGTGTCACTGCTTCCACGCGACGAGTCAGGTTCCGCGTCATCCAATCGGCGCTACCAATATAAACCTCCT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTCATACGCTTCACGAATTGGAAGCAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 47234-44824 **** Predicted by CRISPRDetect 2.4 *** >NZ_HE972577.1 Microcystis aeruginosa PCC 9432, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 47233 37 81.1 34 .AAG.......G.....G..T..T............. CATGAGATATTTCGCCATTAGTCGGGCCTGAATC 47162 37 89.2 35 .AAG...................T............. ACTATCAACTCCCAAGATTTTATCTCTGGATTAAT 47090 37 97.3 35 .......................T............. ATCGGCTGATGGTGTACACATTGATAGCCTTCCTG 47018 37 97.3 33 .......................T............. GGATCGAGGGGTTGCAATTTGGAGATTTCACGG 46948 37 97.3 33 .......................T............. ATATTCGCCATGAACCTGATTTTCTTTATGGTC 46878 37 97.3 35 .......................T............. CTGGATGGCACGGTCAGGGATCAAGTGGCTCCCTT 46806 37 97.3 39 .......................T............. TCAATTTGGCCATCAAGCGATCGGCTACTTTCTGGAACC 46730 37 97.3 36 .......................T............. GGCATTAAGAGTGATTACCTGATTAAATTGATAATC 46657 37 97.3 35 .......................T............. CATCAAGGCCGAGTTAAAGGTGTAGGAGTAGATTG 46585 37 97.3 35 .......................T............. ACTTTGAGGGTATTATCGGATTGGCTTTCGACCTT 46513 37 100.0 35 ..................................... AGCTACAAAATTAATAGATTCATTTTTGAATTAAA 46441 37 100.0 34 ..................................... ACATCTTGCCTGTATTCAGCAATACTAGATTTTT 46370 37 97.3 38 T.................................... TTGAGATGGAATGTTCTGACGAAATTTCTAAAAGGCTG 46295 37 100.0 35 ..................................... AGAGATGGCGTGGAAGCCGCGTACAATCGATACGG 46223 37 100.0 34 ..................................... CGTGTTGGGCGACATATGATCGATGCTCTTCCTT 46152 37 100.0 34 ..................................... AAGAGTGCGGCCTTGATTGCAAGCGTACAGACGC 46081 37 100.0 34 ..................................... ACCGAAGCCGGCAAACTTGCCTGAAAAGTAGTGT 46010 37 100.0 35 ..................................... CTACGCTCATCAGCTACCTCCTAAAATTTTAGCAA 45938 37 100.0 33 ..................................... ATCAAATCTGGGCATAATTTACCTCTATAAAGA 45868 37 100.0 34 ..................................... CTCTAGGGGAAACCCGATCATAGTTTTTGAAAAT 45797 37 100.0 36 ..................................... GGAAGATTTTTCCTTTTTTACTGATTAAATTCAATT 45724 37 100.0 36 ..................................... GCACCACAGCCTTACCCCGCTTTCAATGACAAAATT 45651 37 100.0 36 ..................................... ATATCGGCTTTTGATCAAGCTTGTCGTTTTTAGCAC 45578 37 100.0 33 ..................................... TTGGACAAAACGGGTGAGTCTTTTTTTGTGAAG 45508 37 100.0 35 ..................................... TGTGTTGCTCGGTGGCTGAATCCGATGAGTGCGGA 45436 37 100.0 35 ..................................... GGATCTCTTGATTTCCTGTGTCGATAATAGGCACT 45364 37 100.0 34 ..................................... ACGAGCCAGAGACGATGCCGGAGGTTGTTTCGAG 45293 37 97.3 35 ..........................A.......... TTCCGTACCTTTGCATGGCAACCTCCGCTAAATAC 45221 37 97.3 35 .......................T............. AGGGTTCCGTAGGCAAATTGTCCCGATAAAATTTC 45149 37 97.3 35 .......................T............. GCATGGGTTACAATGTAATTTAATGCCTATTAGGA 45077 37 97.3 34 .......................T............. ACAAATCTACTTTTTTCAAAACATTAGGGGGAGA 45006 37 97.3 37 .......................T............. TGACAAATTAACAAAAAACAACGGGGGAGAGGCAGCA 44932 37 97.3 35 .......................T............. CTTCTACTCGATAGCCTTTATAATCCCGAACTGGT 44860 37 97.3 0 .......................T............. | ========== ====== ====== ====== ===================================== ======================================= ================== 34 37 97.9 35 GTTCCAATTAATCTTAAACCCTACTAGGGATTGAAAC # Left flank : AAATATTTTGATCCGTGGCTTACGAGATGAGTTTTTAAGAGCTATTGGCTCTTTATACAAGTTTCCCGTCTCTATGATTGGAAAATACCCTGGTTTAGCAGGGGAATTTACGCCTGATCTTGATGCAAATCAAGAGTCTATCGGGGACGCGCCGATAGAGAATGCCGACCGCTCGACCAGTAAGCAGATGAAGCAGGAAGGGAATCGCATACCCACTCAGTCCGAGAATGACTCGCAATCCCTTATTTTTCTTTCCGCCCCACCTCAGCCGTGCGAGGATAGCCACGGCACAAATAACCCAAAAGCCTTATCTGATAAGGCATCTAAGCGAAAGTCTAAAAAATCACGGGGCGCAATCCCCGAAAACCCCGACCAGCTTACGATCTGGGATTTGCTAGACTGATTTTTTGAACCGAGCAGAACCTTGAAAACTGAATTTTAACGAATGGGGCGCAATCCTTACCTGAAACCCTTTTACATCAAGGGCTAAAGGAAGATGG # Right flank : TGGAACTTGAAACCTTCTAGTCTATTAATTTCAAAATGAGAATTGCTGTCAGTGAGTTTATCGAACTGCTTGCGTCCAAAATATCCTATAAATTAGAGGAAGTATAAGCTAATTTGTATTGATAGTAAATCTGTTTTTAATAGTATGAGCAACTCTCAATCGCACGCTAAAAACCTTCTCCCTTGTTCCTTCTCCCCACTTCCCCATACCTATTACCTAGCATTGTTAGTATTCTATAATACCAATGCTTAGGAAACTATAAAGAAAATCCCAAGATTAGGCGAGTCCCTTGGCGAAAAAGGCTATAGTAGCATAAAATCCGTAATTTTATCTACAAAATTGTTATGACAGTTACCAATAGACAAGAGCTAGAAGAACTGATTCAACAGGTGAAAAAAGCTCAACAACAATTTGCCAACTATAGCCAAGAACAAGTAGATCTTATCTTCAAAAAAGCGGCATTAGCAGCCAACAACGCTCGCATTCCCTTGGCTAAAATG # Questionable array : NO Score: 8.85 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTACTAGGGATTGAAAC # Alternate repeat : GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : NA //