Array 1 405997-406900 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIXE01000002.1 Vibrio sp. PID23_8 contig_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 405997 36 100.0 35 .................................... TCACAATATGCACCACTCTTTGCTCTTTGGTAGGT 406068 36 100.0 36 .................................... CTGCTGTGAATGTGCGGATCATCGAGCGGTCCGTGG 406140 36 100.0 39 .................................... CCTGTAACAACGGCGCATTCGATGCCAAGCACAGCCAGG 406215 36 100.0 37 .................................... AATAACCTGAGGCGCATAATTAACGACGCCAGATCCT 406288 36 100.0 36 .................................... GGGTCGAAAACGAAACCATACCCAAGTTGGCTACCT 406360 36 100.0 36 .................................... GAGCTTGCTTAGGCGCGGTTCCAGATTCGCAAATAG 406432 36 100.0 36 .................................... CAAGGACGTCGGTCAGTAAGTCGGTCAGTGTCGGGC 406504 36 100.0 36 .................................... ACCTGACTCAAAGTGCCATGACTCGTCACATCACGG 406576 36 100.0 36 .................................... TAGGATGATGCCGCCTCGGTTCTGCACTTCTTCAAG 406648 36 100.0 37 .................................... TCGATAAACTCTAGGTCCTCATGCTGCTTGTCGAATA 406721 36 100.0 36 .................................... TTTCTTCGCTGACTCTTGGCTACTTGTTGTGTACAG 406793 36 100.0 36 .................................... GTCTTTACGCACACCTTTAAGCAGGAGGTCATGCAG 406865 36 88.9 0 .................C.............A..AG | ========== ====== ====== ====== ==================================== ======================================= ================== 13 36 99.1 36 GGTAATCCGTGGTAAATGCCGCGGCCACATTGAAGC # Left flank : ATGAATAAAGAACACCTTTACTTGGTAACCTATGATATCAGCGACTCTAAAAGATTACGTCGAGTTTTTCGTCTATTAGAAGGCTATGGAGAGTGGGTACAACTTTCCGTATTTCAGTGTAGATTAAGTGCAAGACGCCATCAGCGCCTAACTCATGAACTAAATACTGAAATAGTCCAGAAAGATGATCACGTTCTTATTTTCAACCTTGGTGTAGCAAATGATAAAAAGTCAAACGTAACATCTTTGGGCAGAACATTCGAGCCAGTAACAAAAGAGGCTGTTATCATATAAGCAACTGCCGAATATCTGCGAGCGGCTATGTAATTAGCAATAAGCTAGAAGCTCTCGAAATTACAAATGCCCATACAAACCTGAACGTTACAGTCAAAATATAAAAGAATCATGAGTAAACTCACTGTAAAAATATGTACTACAATAAGAGATCTCGCACAGAGCCCTGCTAAGCCCGATTCATCAAGGCTTTAAGTTATGAGGGG # Right flank : GTATTTAAATAACTCGCAGCACATGACAATGAACTAACTACGGAGTTAGGTTACTACTACCAACATTAGCCTAGGGATCATGCAATGACAGAGGACTACATATACATTGTTGGATTTGTCGCTATCTATACACAAGCCTTTGATCGGTTAATGAAATAGCAGTTTTATACAAATCACATCAAAGTGTCCGCATTCCAACTAAACGGAACTCATTGTGGTTTAGAACAACTTTTCGTTCATTTCAGAACCAACTATATTCAGCTAGAATCATTCCTCTGAAGGCACATTCAACGTCATTTTTTCTAGAGTTTCCTTCAGCTCACATGCTTGGCGATACGCTTCATTCAACTCTTTACTTTGATTTCCTTTCTCAAAACGCTCTACGAGTTTCTCAATCAAAGCCTTATGTTGGTTTAACTCATGCTTCAGCAAGATGTTTTCTGCACGAAGCTTTTGGATCTCTAAATTCTCTTCCATCATATTGGAAATTCTTTCTGCTG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTAATCCGTGGTAAATGCCGCGGCCACATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.60,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 27252-27043 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIXE01000015.1 Vibrio sp. PID23_8 contig_15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 27251 28 100.0 32 ............................ AAGCCTCTACAGCAAGCAATACCAAGCCGATC 27191 28 100.0 32 ............................ GAGTAATAACGTACCGCAGCCACCTTCAACCA 27131 28 100.0 32 ............................ AACCATTATTTGTCATCGTTCGATGAAGAACT 27071 28 96.4 0 ..........................T. | C [27047] ========== ====== ====== ====== ============================ ================================ ================== 4 28 99.1 32 GTGTACTGCCGAATAGGTAGCTGATCAT # Left flank : AAATGAGACGGCTTGGTTATTTCGATATTTCAGCAACGGCTAAAATCCCCGAAGATTGCGAATACGTTTTGTTCGTGCGTAATCAATCAATCGACAAATCCACTGCCGCCGGTCAAGTCAGAAAGTTGAAGCGCCTTCAAAAGCGCGCAATGGCTAGAGGAGAATCTTTTTATCCAGCTCTGATGAGACAAGAAGAGTCTATTATTGTCCCTCACTATCACTCTCTCGAGGTTAGCAGTCAAAGTAAAAACAGCCCCTTTCGGTTGAACATACAAATGAAACCAGAACAAAGTTTTGAGGGGAGTTTGGTTTTCAGTAGCTACGGGCTGTCAAATGCAAGCAATTCGTATCAACCAGTTCCCTTTATTTAACCCTATTTTTATCGATAAATTTAAAGCATTGAACTATATAGCTTTTTACATCTGTGAGAAAAGTAAGGTTAATTGGCAGTAAATTTACTAACTGATTGATAAATTCATACTATTCTTAAGTTAGTAACT # Right flank : TAATATCAATACTGTTGCTTCCAACCTCAAACCACTATTCTGTGGTTTGCTTTAGAACAAAATGAGGACTATAATCCTTGCAACTGCTGTGAAGTAGCTGATAATAAACGAACCACTTTCATTCGTGTTCAAGAACAATTTACTGCTGAATAAGTAGATACTTTAGGCCTTTTGCCGTTTGACTTTCAAGGCAACAATTCTCTCACATCACACTCAAGAACTTCTGCTAACTGATACGCTTTCTCGAGTGTGATGTTTACTTCTCCACGCTCAATCCGTCCAATATAACTTCGGTCAATATCAGCTGTTAAAGCTAATTGATCTTGTGAAACACCTCTATCACGTCTTATGCCACGCAATTTTGCGCCAAACTTTTTTGCTAAGTCTTTCATTTTAATCAGCCCATAAAATGAAAGACTATCGCCTCTTGATGCACACATAACCACGGACTATAATCCTCATTTTAATCACAACAAAAGATCATGACCAAAGAAGTTCGA # Questionable array : NO Score: 2.81 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTACTGCCGAATAGGTAGCTGATCAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //