Array 1 101189-99879 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRTP01000004.1 Escherichia coli strain A188 NODE_15_length_137583_cov_55.4479, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 101188 29 100.0 32 ............................. GTGACCATAAGGGCATTTCATACTGCCTTGCT 101127 29 100.0 32 ............................. GTGAACGTGACAACGCCCGCGACAGAAACGTC 101066 29 100.0 32 ............................. GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC 101005 29 100.0 32 ............................. AAATTAATTTCGAAACGGGCGTTGATGGTGAA 100944 29 100.0 32 ............................. GCTGGCGCACCTTACGCAAAAATAGACGTAAA 100883 29 100.0 32 ............................. CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG 100822 29 100.0 32 ............................. GGGTTCTATTTCCTCGGGATTTGCCGACACGC 100761 29 100.0 32 ............................. GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG 100700 29 100.0 32 ............................. GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA 100639 29 100.0 32 ............................. AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG 100578 29 100.0 32 ............................. TTGGTATTAACGGGAATGTAGTCACTCCAGGA 100517 29 100.0 32 ............................. GCGATCGTATTTTCCGCTACGTCGCTCAAATG 100456 29 100.0 32 ............................. TCGTTGATGGTGTGATGAGTGTACAAAAAAAA 100395 29 100.0 32 ............................. ACGACTGAATCCGGCGAGGCTATCAACTGGCC 100334 29 100.0 32 ............................. CCGCACACGTCGAGCTGGTGGGGATTAATGCT 100273 29 100.0 32 ............................. CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA 100212 29 96.6 32 ............................C TCTGTGTATTCGCTACCAGCCAGCACCGGTAC 100151 29 100.0 32 ............................. CAGGGTAACTGGCTGCTCCTCAACCATTCCGC 100090 29 96.6 32 ........C.................... GGGTTTTAGCGACCGGACCAGAGTACGCAACA 100029 29 96.6 32 ........C.................... TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT 99968 29 96.6 32 ........C.................... GGAGTGATGAATTGGAAGTAACGGATAACCGC 99907 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 22 29 99.4 32 GTGTTCCCTGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT # Right flank : GACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAAC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-11.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //