Array 1 912162-910026 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033192.1 Xanthomonas oryzae pv. oryzae strain NX0260 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 912161 31 100.0 35 ............................... GTCGCATACTCGCTGCGCCCGTCACGCGCACCGGG 912095 31 100.0 34 ............................... TCCAAACGCACATCCAGGGGATATGCAAACCCGC 912030 31 100.0 35 ............................... ATGAAGGGCCAGAGCATCGGCGGCATGCTCGGTAA 911964 31 100.0 35 ............................... CCAATTCGGCTGCAGCGCGAATGCGATGACTACCT 911898 31 100.0 35 ............................... ATCGGCCAGGAGGAATAACAACCGCAGCCTTAGCA 911832 31 100.0 34 ............................... ACTGTTTGAGAGTCGCCGGCGCGAATACGGCCGC 911767 31 100.0 34 ............................... TACCTGTGGCGCGTGCGTATCACCGACCGCGACG 911702 31 100.0 35 ............................... CTGCACTGCGTCGCCACGCGCATCGACATTACGAA 911636 31 100.0 37 ............................... TGCAAGAGTTGATCAAGTCTGCAACTGATTGGCACAC 911568 31 100.0 36 ............................... TTACCAAGCGCCCTTACAATAGTCAGAGTTTGATCC 911501 31 100.0 36 ............................... TGCATTATGGTCAGTGGCCCACCAAGCAGCTAGACC 911434 31 100.0 35 ............................... TGCTGCATGCTTAGCAGTTGTAATTCCCTCTGCCT 911368 31 100.0 36 ............................... GTGATGGTGCTGGAACAGGCGTTGTCGGCTGTGCTG 911301 31 100.0 35 ............................... TTGAGATAAGCGGCGATCTGGTCGGCCGTGTAACC 911235 31 96.8 35 ............A.................. TAGATCGCCCACAAAGGACCGTGGATATGTGGACA 911169 31 100.0 34 ............................... TTTCGCGGCGTGATCACCTGGTCGGCGATTAACG 911104 31 100.0 34 ............................... ACCATCTGCGTTTCTGCATCGCTGAAAAGGCCGC 911039 31 100.0 34 ............................... ATCGTGCGGCATTGCCCAACGCCTGATGCGTTGC 910974 31 100.0 35 ............................... TGGATGCTGACGTTCGTGACTTGCGCGCCGCTGTC 910908 31 100.0 35 ............................... GGGCGCGGGGCGAGCGGGACGACCTGGATGCTCAT 910842 31 100.0 34 ............................... GTTCTATACGCGGAACGGCGCGGGCACGCTGCTG 910777 31 100.0 34 ............................... GTGGCCCACGTCGAGTCGCAGGCGAAACGACCGC 910712 31 100.0 35 ............................... ACGTTCAAGCCGCTCGCCCTGGGCGACCGGTGGGA 910646 31 100.0 35 ............................... ACGTTCAAGCCGCTCGCCCTGGGCGACCGGTGGGA 910580 31 100.0 35 ............................... CCGACCTCAAGGCGCGTTCCTCCGGTTCGATCCAA 910514 31 100.0 33 ............................... ATGGGTAGTAACGTATCCACGGCCCGTGAAGCG 910450 31 100.0 36 ............................... ACGTAGAACGAGCGCTTGTTATAGCGCTCGCGCCAC 910383 31 100.0 34 ............................... CTGCACATACTCAATCAGGGCGCTGTCGGTGCGA 910318 31 100.0 34 ............................... ACCGCATCCCGGAAGACCCACAATGTTGTCCGCC 910253 31 100.0 36 ............................... GCCCGACGGGTATGAGCAAGTCTTTGCTGGGATACC 910186 31 100.0 34 ............................... CGCGACGGGCTGGAGCTGGTAACCCCGTCGCAGA 910121 31 100.0 34 ............................... GAGTGCCCGGGGTCGGTGTCGGCGCAGGCTGGCC 910056 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ===================================== ================== 33 31 99.9 35 GTCGCGTCCTCACGGGCGCGTGGATTGAAAC # Left flank : GGAAGTAAGAGGACGCCCGCGCATGATGGTCTTGATCAGCTACGATGTCAGCACCAGCTCCCCGGGCGGCGAGAAACGCCTGCGCAAGGTCGCCAAAGCTTGCAGGGACCTTGGTCAGCGTGTCCAGTACTCGGTCTTCGAGGTTGAAGTGGAACCGGCGCAATGGGCCGAGCTTAGGCAACGCCTATGTGATCTGATTGATCCCAGCGTCGACAGCCTGCGCTTCTACCACCTCGGCGCAAAGTGGGAAGCCCGCGTAGAGCACGTCGGTGCCAAGCCAAGCCTGGACTTCAAGGGTCCGCTGATCTTCTGACGCGAACCCCAAGCGACTTGCGAAAGCCGGGCAGGCTCGCGAAATTTCCAAGTGATTGATTTTAAAATAAAATCACTTCACTTGCCATCGCGGGTGCTCATATTTGCAAGGCATGGAACCTGTTCGCGTTCCTGTTCGCGAAATGACGGGTTTTCCCTCAAGACGCGCAAGCACTTATGCTGGCGGG # Right flank : ATGACGCGTCAGCATTACTCATAAGTCAGAAATATAGGCGACACTTGGATGCGTGAAGAACGAGCGCACCAATTCTGGTCGAGCTGCAATGTCGGACAACTGATCATGCACCCGATCGGCCAGCTTCTCGCCACTGCGCAGCGGGCTGCGCGCTACGCCCGTGCGCTTGGTGTAGCTCCACACCAACTCGTCGGGATTCAAGTCCGGCGCGTCACCCGGCAGGAAATGCAGCGTCAGCCTGCCCTTCAGGCTGTCCACGTCATCGCGCAAGCCACGGGTCTTGTGGGCAGGCAAACCATCACCTGATTAGCACGATCTTTCAGCACAGTCGCAGCCAGTGAGAGCCGACCGGTCGATGGTAGGACCGTCGCTCCACCGAGACCAGATCATGGCCATGAATCGTGTGCAGTTCCAAGCCGGGCTGTCGTTGCCGGCGTTCCTCAAGTGGTGCCCAGCTTGCTGGCCGCCGCAGCCGCCAGCAAGCCGTGGTCCGAGCGGGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGTCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGTCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [56.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //