Array 1 51069-49205 **** Predicted by CRISPRDetect 2.4 *** >NZ_RYVA01000004.1 Bifidobacterium pseudolongum subsp. globosum strain 1805B Contig_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 51068 36 100.0 39 .................................... GGGCAGACATTGACGCCGCTGCAACGCCGTCAGGGGCGC 50993 36 100.0 36 .................................... TTCCGAGGCGCTCCGTGGTGCAGCACACGCAACAAC 50921 36 100.0 37 .................................... GTGGAAACTGTAGTGTTGTGGGTCAGCAGCCACGCAG 50848 36 100.0 36 .................................... GAGTCACGGAGGCGCTAATGACATATCTCATTCCGC 50776 36 100.0 37 .................................... TCAGGCCGTGGCCTACTGCACCAAAGAAGCCACCCGC 50703 36 100.0 39 .................................... TGGGCGACCCACAGGCCACAGTTGAGTTTGTCCGCAACA 50628 36 100.0 38 .................................... GACACCAAACACGTCGACCCATGCCTGGAATGCTCCGG 50554 36 100.0 37 .................................... TACCGAGCGCGATGTACTTTGGAACGTCCTTCTTGTC 50481 36 100.0 38 .................................... TTGTAGGGGCCACTCACGTGGGTCTTGGTCTTCTGAAC 50407 36 100.0 37 .................................... GAGATCAACGGCGTGGCGCTGTCACGCACGTGGGCGT 50334 36 100.0 39 .................................... AACATCCGCGCTGCAGGAACTAGCCGAGGAACGCGCCAG 50259 36 100.0 36 .................................... CAGTGCGTCGAATATAACCGCCTCTGCTATCAGGTC 50187 36 100.0 38 .................................... GACCTGCTCTCGGGAGGGCCGGTGACCGTCAGCGCCAG 50113 36 100.0 38 .................................... CTGCTTGACGGCACCTATCACCCCGTCAAAGAAAACAG 50039 36 100.0 35 .................................... GCGCACACCGACCACGGGGCATTGAGGATCGACCA 49968 36 100.0 36 .................................... GGCATCACCTACCCCACCGACTCGGATCTCGTGAGG 49896 36 97.2 36 .................................A.. GGGTCCAGATAGGTGCCGTAGAGCATGTTTTTGATC 49824 36 100.0 40 .................................... ACCGAGGAAAAACAAGACGACAAGACAAACGATGGCGATC 49748 36 100.0 35 .................................... TAGCCCTGCCTCCATGTGTCCTCACCGAGCTTCGT 49677 36 100.0 37 .................................... GAATAAACCGAATCACTCATGGGGTTCACCTCCCGTC 49604 36 100.0 35 .................................... CCGTCGGTGTATGGGTCGGCGTTCGCATGCCCCAC 49533 36 97.2 36 ............C....................... CACGCGTTCACCCCGCCCACGCGCAAGTTCGTGCGC 49461 36 100.0 40 .................................... ACGTGCCCCATCAAGTCACCAGTTTGATCGAATCGGGGAC 49385 36 100.0 35 .................................... TTCAGCGAGGACGGCATCACGGTGCACCCCGAATC 49314 36 100.0 38 .................................... GCGACGGATTCATGTTGAGCGCGTCACGCAGCGCCGTG 49240 36 77.8 0 ................T.......AC..GCG..AA. | ========== ====== ====== ====== ==================================== ======================================== ================== 26 36 98.9 37 ATCTCCGAAGTCTCGGCTTCGGAGCTTCATTGAGGA # Left flank : CTTCAACGACGTGCGTTTGAAGAACTTCATCGAGATGCGGCACTGGGACTCACTGCCGATTGAACGCGCAGAACTGCTTACACAGATCGTGAGCAACCTGTTCTACGATGTAGAGCGCCGAACCAGCCTCGAATCGTACTTCAGCGGACTGACCGGCGAAGACGTGCACGCCGCAAAGGCTGTGCTGCAGGCGCGCGGGGGAGACGCGAAGCCCTACGACCAGCCGATGGACTACTGGGCCGAAGTGCTGGGCGTCGGGGATGCGCTTGCCGATGTGCCGGGAGACGCGAAGTGGCCGGAGGTGCGGCAGGGGTAGAGGAATACTATCTCTGTGCGAGAGCTGTATCATGCAGCATAAAGCAGGGAATCTCTCGCATCAATACTTTGTAAGGATTTGTTGAGCTTGTGTAGAGAAATCAGTCGTTTGTATCACGTCAATATGTCTACCTCTCGCAAAAGCGCTTATCAGGCTATGTGTATCAGTCTGTATTATGGCTACT # Right flank : TTAGGCATCGGACACCTGAACTTATAGTCAGTTGATCGTCTTAGAAATCTTGGCTCTGACTTTTCTTGTTTTTACTTTCGACATGATTCAAAGCACTCTGATTTTTATCTAAGCAAAAATGAAGTATGCTGAGAATAACGCAATGAAGCGAGGTGAAGGGTTGGAAGATACATTACCAATTAGTCTCATATGTGACTTTATCTTTTGTCCACGAAGGGCATGGTTAGAAATCCAAGGTGAGAAGATTGAGTCGTTACAGATGGAGCGCGGTTTTCATGACCATCGTGCAGTGGATGACGCCAACGGTGGCCGCGGGGATACTGACTATAGGGCAGTTAATGTGAATCATCAGGGGTGGGGACTGTCGGGGCGATTAGATGCGGTCCGGTTGAATGAAGACAACGGTGTGATTATCCGTGAATATAAAGCTACACCTGTGCGTAGGAGTATGGATGTGACACATGCCATGCGTATACAGCTTGCCTTGCAGGCTGCATGCA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCTCCGAAGTCTCGGCTTCGGAGCTTCATTGAGGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.10,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //