Array 1 302937-303612 **** Predicted by CRISPRDetect 2.4 *** >NZ_NJFJ02000001.1 Micrococcus sp. FDAARGOS_333 scf7180000000002_quiver_pilon, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 302937 36 100.0 35 .................................... TGGCACTCATCGGCTCAAGATGCCGACTCAACGCG 303008 36 100.0 35 .................................... ACACCCTTGCCACGGACAACCAGACCCGGTTCTCC 303079 36 100.0 34 .................................... TGCAGACCCCGACCGGCATGGTCGCCTGCGTCCC 303149 36 100.0 34 .................................... TCGGGTCCCGTACTTCCGCGTACACGCGCCGCCG 303219 36 100.0 34 .................................... CGCGCTGGAACTTCACCCATGCGGCCTTGTCTGG 303289 36 97.2 35 T................................... TTCTCGGACAAGGTGACCACGTGCCGGTGCAGGGT 303360 36 100.0 35 .................................... ATCATCGCCTTCACCACCGACGACCGCACCACCCG 303431 36 100.0 37 .................................... AGGCCGGTAGCGTCACCCCGCAGGCTCGCACTGACGA 303504 36 100.0 37 .................................... CTAAGAACACTGCCCTGATCGAGGAAGCCTCCAAGCG 303577 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ===================================== ================== 10 36 99.7 35 GCCTCAACGAAGTCCGCTGCACGAAGCAGCGGAGAC # Left flank : TGAACGGGCGGGACGTGCAGTCCGTGGAGCTGGCGAAGGGGGCGACGCGCGGCTCCCGCGAGGGCGACGCGACGCTGCCCGGGTCCACGCTGCTGCGCTCGTACCACGAGTTCACCCTGCCGACCGGGGCGCTGGCCGCAGGCGAGAACGTCGTGGAGTTCACCGTCGCCGAGGGTGGCTGGGTGGCCTGGGACGCGCTGGGCCTGTACGAGCGGAGGTCCTGAGGCGGCCGGGGAGACGTCCTTGGCCGTGCGGGGCTCACCTGATGCCGTTCCACACCGACGGGATCAAGTCGGGCTCATCCCGGTCGCGCGGTGCTCACGCCGGCCGGTCCATGGAGTGGCCGATCGGTACGGACTCATCCCCGCTCGCGCGGGGCTCACACGGGTCTGGTGACGGTGAAGTGAAGCGTCCTGACCTCGGAACGAAACCCAGGGCGCTTCAGCACGAAGCAGCGGAGACAACGGGTCCCGGTTCACGACGGTCGCGACTTCTGCCGA # Right flank : CGCGGTCGTGAAGGTGACGGGACTGCTGCACGAATAGGTGACATCTGATCTGTGACGCTGTGAGGCGTTGCTGGAAGGATGAACACCGTGCCCAAGCCCTACCCCCAGGAGTTCCGCGACGACGTCGTGCGCGTCGTCCGTGACCGTGAACCCGGCCAGACCATCAAGCAGATCGCCGCGGATTTCGGCATCGCCGAGTCCTGTGTGCGCAACTGGATACGCCAGGCCGACGTCGAGGACGGCGCCAAGCCCGGAACGGGTGCCCCCGAGCACGCCGAGCTCAGGGAGGCCAAGAAGCGCATCCGGCTGCGTGAGCAGGAGAACGAGGTGCTGCGCCGCGCCGCGGCCTACCTGTCGCAGGCCAACCTGCCGTCAAAAGGCTCTACCCGCTCGTGAAGGAGCTCGCCGCCGACGGTATCCCCGTCACGGTGACGTGTCGGGTCCTGAAGCTCTCCCGCCAGCCCTACTACCGCTGGCTCGCCACCCCGGTCACCGACGCC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAACGAAGTCCGCTGCACGAAGCAGCGGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.90,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 383541-381785 **** Predicted by CRISPRDetect 2.4 *** >NZ_NJFJ02000001.1 Micrococcus sp. FDAARGOS_333 scf7180000000002_quiver_pilon, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 383540 29 100.0 32 ............................. GAGACCGGCACCCAGTTCTTCCCGCCGGTTTC 383479 29 100.0 31 ............................. GGCACCCAGTTCTTCCCGCCGGTTTCTTCCG 383419 29 100.0 32 ............................. AGCATCGAGAACTCGAGACTGATCTGCCGCGA 383358 29 100.0 32 ............................. AATCGGGGCCTCGGAGACCGTCGCAAGCTTCG 383297 29 100.0 34 ............................. ACTGAGAACACCTCCCGCACCTACACCACTCTCG 383234 29 100.0 32 ............................. GGCCCGTCATGGCCACCATCGAGATCACCCCG 383173 29 100.0 32 ............................. CATGCCGAACCTGCGCGCATCGTCCTACGGCA 383112 29 100.0 34 ............................. GTGTGGAGTGAGCACGCCGCCGGAGTCGCCATCG 383049 29 100.0 33 ............................. ACGACGTTCCTGGACATGCGCGAACTGAACATG 382987 29 96.6 33 ............................T GTGACCCGTGTGCCGCGCTCGGTGACCACCACG 382925 29 100.0 32 ............................. ACCGTATGAGGCCCTGGCCGCCCGTGTTGTCG 382864 29 100.0 32 ............................. AACTTTGCGACCACCGAGGCCGACATCATGAA 382803 29 100.0 33 ............................. GCGGGTGGGCATTGGTGCGGCGTGGACCAGGAG 382741 29 100.0 33 ............................. GTCCGCAATGGAGGACATGGTGCCTGCGACGAA 382679 29 100.0 33 ............................. GGTGGTCTTGGTGCCCGCGAGGCGGGTCAGTCG 382617 29 96.6 33 ............................T ACCCGTCGGGGTCAGCGAACAGGGTCGCCGCCG 382555 29 100.0 32 ............................. GTGTCCGCGCCCTCGGATACGACCCCGGGGCA 382494 29 96.6 33 ............................G GAGCGGGACCGCGGTAAGCGGGTGCTGGCCGCG 382432 29 100.0 33 ............................. GCTGATACGCAGATGGTCGTAGTCCTGCGCCTC 382370 29 100.0 33 ............................. ATGAGCATGGGGCGCACGCCTCCCCATGCTTCA 382308 29 100.0 33 ............................. AAGCCGAGGATCAAGCAGTTGCAGCAGGCGACG 382246 29 96.6 32 ...................A......... AGACGCCATTGTCCGCGAGCTGAAGCGCGACG 382185 29 100.0 33 ............................. AGCTTCAAGGTGGGGCGACGCCACTTCACCTCG 382123 29 100.0 32 ............................. CAGTATGGGTGCCCTCGGCTACCGGCATCCGA 382062 29 100.0 34 ............................. ACCCACTACCGAGGCTCGCTGGCGCGTAGGGGCG 381999 29 100.0 34 ............................. GGGGATGATGGTGCAGCCGTGCATGGTGGCTTCG 381936 29 93.1 33 ....................A.......G ATCATCAGCGTCAATGGGGTTGACCGCACGGTG 381874 29 100.0 32 ............................. AAGACCCGACCGCCATCGCCAAAATGGTGAAG 381813 29 96.6 0 ......................C...... | ========== ====== ====== ====== ============================= ================================== ================== 29 29 99.2 33 GCTTTCCCCGCGCGAGCGGGGCTGACTCC # Left flank : CTGCGATATACGCGACCCTCGAGGTCGCTGTGCCCCGTGTCGAGGAAATCGACGTTGAGGACCTGCGTCTGTGGAGTGACGAGGACGTCGTCCCCGCGGGAACGAACTACGCAACGGCGCCGGAGGTCTGGTGATGGCTGCACTCGTAACACTCATCATTCGTGCTGCCCCTCGAGCAATGGGAACGGCTCAGAGGTACTTGACTCGAGTTTCGGAGGAAACCCTCGCTGGTCGGATGAGTACACGAACTCGCGAAGCATTGTGGGACTTAGTTTGCCAGGAGGTCGACGAGACACGCTCCGGACGCGCAGTGATGATTCACCCCGACCCGTCCGCCCCCATGGGGTATATTGTCCTCCAGCACTCCAGGTCGCCCAGCAGGACCTTGATCCAGGACGGCTTAGTGGTGTCTCGACGCCGACCGAATCCTATGGATCGGACTGGTGAGGATGATTGGTAACGTTTCAATAACGTACACGTATCATGCCTAGTCAACATCG # Right flank : CTGGTTGCATGAGGCGAAGGACCAGCTCACCCGGCTTTGCACGGGCACGCGCAAGAGCCCCGCCGGCCTCGGTCATCCCGAGTACGGCGGGGCCCTTCCCCTTCAGTGGAGGCAAGGGGACTCGAACCCCTAACCCCCTGCTTGCAAAGCAGGTGCGCTACCAATTGCGCCATGCCCCCGTGTGCTGTCCATCCCACAGCTGTTCAGTTGTGTGGTCCCACTCTAGCGGGTGCGTCGCTCAGCGTGCGTCCGGCTCGTCCTCCGGGAGTTCGTCCGTGGCCGAGGCCCAGACCTTCCGGTCCTGCTGCGCCTGCTGCCAGGAGCGCAGGCCCCAGGCGGCCGCTGCGGCGACCGCGGCCACGGCCACCCTGCTCAGCTTCGACACGTTGTGCCTCCTCGCGTGGAGTGGGAGCCCCTCAGACGACTGAGGCCCCGTCCAGCGGGGCCTCGAGTGCTGTGGGAGTGGGCGTACCAAGACTTGAACTTGGGACCTCTTCGTT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTCCCCGCGCGAGCGGGGCTGACTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.60,-12.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //