Array 1 614992-615543 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP034118.1 Staphylospora marina strain SCSIO 07575 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 614992 37 100.0 35 ..................................... GATATACGGTTTGCCCGGACCTGGAATCCAGTAGA 615064 37 100.0 37 ..................................... GATGAAGCCGCCGTCATAGTTCAGATGTGCGAACATC 615138 37 100.0 38 ..................................... TGGAGGATTCATCCAACAGACGCCCTGCCAATTCTGCG 615213 37 100.0 38 ..................................... CCGGTCCCTCGCGGACCAAATCCGGACGGAGCACATGA 615288 37 100.0 34 ..................................... GATGCTGCGGGAAGGGCTGAGCTACGACCGGGTG 615359 37 100.0 36 ..................................... GTGCGGGCATTTAACTGCAAGGCAAAAGGTTGGGAG 615432 37 100.0 38 ..................................... TACGGGAACCTCGCGAAGAAGGGGTGGGGGATGTCGGT 615507 37 81.1 0 .C..................AA.....ATT......T | ========== ====== ====== ====== ===================================== ====================================== ================== 8 37 97.6 37 GTCTCAATGAATACACCTCAGTTAAGAGGATTGAAAG # Left flank : TTTTCCAGCGCAATTAAAGCTTATGAGATCTGCAGAGGGAAGCGGGTCGAATGGGAGAACCTTGAACCGCTGATTCATCAGATTCGGATCGAACACTTGGTGGTGGCGACTGAGAGAGTTTCATTTGGAGAATTCAATGTCATCGGATTCAAGGGAAAAATAACCATGAACATCAAGGCTCTGCCGAAAGAGGAGCAGCTTTTGGTTTGGCGGTTGGTTGCGCAAGGCTCGTTGATGGGGTTTGGATACAAAACAGCTTGGGGGTTGGGTCAAACTCTGCTTGATCCGCTCGAAGATGCTCAGGCCTTTTTCCGAACACCCGGAGCTTCGAAAAAATCCCCGGGGGTGTTCGGAAACGCTAAAACCCGCATGGGATAAGAGGTTTCAGGTGTGGGAACGGCGTGATGTTTGACTGAGTCATTCTAAATTTCCGCCCGAATGAAAAAGTGTTCGGAAAGTCCAAGAGAAAGGCAATCAAAACAAGGGTTTCGGCGAACGCC # Right flank : TCTCATTCAGAGTTCAGAGAACAAAACAGAGGGGAATATCATGAATCTGTCTGACGTTTTCAAGAAGAAGTTTTTCAACCAACAGTTGCTCCAGGAAGATGACGGTTACATCACAGGTGGAAGTCATGTGTGGCTCGCCCAAACCGATGAGGGGGAAGTCATCGTTCGCACGTCGGCCATCACCGATCTGGAGAAAGTCCCTTACTGGTACGGAAACCACATCTTGTTCGGCATTGATCCCCGCCGGGTGTTTGTGCTTGAGAAGTTGAATCGTGAACTGGCTTCGATGACCACCCGCCTGTCGGTTCCGCAGGTTCTGGACAAGGCGTCGCTTCAGGGACATGAATACGTGATCGTGGAAAAATTGCCGGGAAAAGCATTGGACACATTCAGGGGAATGCCGGACCATCTGATGGAAGACTTCGGAGCATCCATCGCACACATTCATCTCCGGTCGTTTGACTATTTCGGCGACGTTTCCGGAAGTACGCGCAAACCGT # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:0, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAATGAATACACCTCAGTTAAGAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.00,-5.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 2 2407589-2406140 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP034118.1 Staphylospora marina strain SCSIO 07575 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ================================================================================================================================================================================================================================================== ================== 2407588 31 100.0 37 ............................... CGGGTCTCCATCAAACCAACCATTTCCGAACAGGCTC 2407520 31 100.0 99 ............................... CACTCACTTCAAGTCAATTCTGATCGGCTTAACAACGATCGGGGCGGGTGGTACCTTCGGTTTCTGCTCTGGAGTGGAAGTGGGGTGCTGTTGCTCTTG 2407390 31 100.0 35 ............................... GTCACGAACAACGGCGGGGCGGAAGCATTCCCGAA 2407324 31 100.0 36 ............................... TCGACAGAGAGGAGAGAATGGAGAAAATGTCCACTA 2407257 31 100.0 37 ............................... TGAAATGCCCTGGATGACCAATGCTGATCGGCTGGTG 2407189 31 100.0 36 ............................... TGATTTTTTCGTTGTCTTCCTGGATGCGGTCTTTCC 2407122 31 100.0 37 ............................... ATGGTCATCACCGATTGGACTTTGACGAGATCCTCGT 2407054 31 100.0 37 ............................... ATGGTCATCACCGATTGGACTTTGACGAGATCCTCGT 2406986 31 87.1 242 ..........G................TGT. AGGGAGCTCGCTGGAATCCCTCCCCTGTTCGTTTCGTTGCGATGGCAAAGGCACTCACAGGGGAGGGATCCGGCTTATATTGGTGTGAGGAGACACCAGGACAGTGACGGAAGGGTATCTTTTCTGAATAGTGAATCGAAGTCTGTGAACCTCCCGGGGTTTTTGCGGGATTCCCGGTTCACAGACTTTTTGAGGGTTTGGTATAATGGAGAAGCCTTGATTTATCTGATGTTCACAATGGG 2406713 31 90.3 38 ..........G......A...A......... TTGATCTCCGGGACCGTGATCCCGGATTGTTCGTCTAA 2406644 31 93.5 36 ..........G......A............. CCGGTTCCCACCAACCTTGCCGGATCCCGTATTCGA 2406577 31 93.5 34 ..........G......A............. TCCCGCCGCCCCGTTGTTTCTCTTGGGCTTCCAG 2406512 31 93.5 36 ..........G......A............. GTGAGATGGAGGTCGAGGAAGTCCCTCGCCTTGATG 2406445 31 96.8 38 .................A............. GAACGCCGGCAGCGCGACCTTTGGTGGCAATCTTAATT 2406376 31 90.3 36 ......A...A......G............. TGAGCTTCTTGATGTATGCCGCGACAGTCGGTTCAC 2406309 31 90.3 38 .......A..G......G............. ATAAATTGTCTCATGTTCAAGCTTTGCACTTCGCCATT 2406240 31 93.5 39 ..........G......A............. GGCGGTCCGACCATAAAAACGACTTCATTGGTAGGGTTA 2406170 31 80.6 0 .................G.......A.GTGA | ========== ====== ====== ====== =============================== ================================================================================================================================================================================================================================================== ================== 18 31 95.0 52 GTTTGAGTTGTATCCATCGTGGAATTGAAAG # Left flank : TCTTCGATATCGGCAGTTTGAGTTGGATCCATCGTGGAATTGAAAGCCGGCTTCAAACGATCCATGGCCTTCTCAATCATCTGGTTTGAATCCATAGTGGAATTGAAAGATCATACTGATTTCAAGATAATAGTTGAACTCATCCATGTATGAGTTGTATCCATGGTGGGATTGAAAGGTCATCAATGAGTAGTATGATGACAAGGAACGGGAACGTTTGAGTTGTATCCTTGTTGGGATTGTGTGAGGGAGTGTGCCGGAACCCCTCTCCTGCTCGTTTCGTTGCGATGGCAAAGGCACTCGCAGGGGAGGGTTCCTCCTTTTTATTCGTGTGCGAGAAACCACCTTGAATAACAAAGTAGTGACGGGATGGTATCTTTTCTGAATAATGAATCGAAGTCTGTGAACCTCCCGGGGTTTTTGCAGGATTGGAGGTTCACAGACTTTTTAGGGGGTTGGTATAATGGAAAGGCCTTGATTTGTCTGGTGTTCACAATGGG # Right flank : GGGAGCCCGCCGGCAGCCATCCCCTGTTCGTTTCGTTGCGATGGCAAAGGCACTCGCAGGGGATGGCTCTGGCTTTTTTATTGGCGTGAAATATACCAACTGGCTTAACAGAGCAGTGACGGAAGGGTATCTTTTCTGAATAATGAATCGAGTTCTGTGAACCTCCCGGGGTTTTTGCAGGATTCCCGGTTCACAGACTTTTTTGGGGTTTGGTATAATGAAAAGGTCTTGATTTGTCTGGTGTTCACAATAGGGTTTGAGTTGGAGCCATAGTGGAATTGAAAGATTAGGAAGAACACGCCGACTAAGACTATGACGCTCGTTTGAGTTGGATCCATAGTGGAATTGAAAGCCCGAATGAAGCCACCTTCACTCGTTCCCATGGGATCGTTTGAGTTGGATCCATGGTGGAATTGAAAGTTAACTGGATGGTGGTAGGGAATCGGGAAGGGTTGGTTTCAGTTGCATCCATACTGGAACATCCTTCGAACTGCTTTCCC # Questionable array : NO Score: 4.17 # Score Detail : 1:0, 2:0, 3:3, 4:0.75, 5:0, 6:0.25, 7:-1.52, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGTTGTATCCATCGTGGAATTGAAAG # Alternate repeat : GTTTGAGTTGGATCCATAGTGGAATTGAAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.20,-2.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA // Array 3 2408474-2407843 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP034118.1 Staphylospora marina strain SCSIO 07575 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 2408473 31 100.0 36 ............................... TCCATTAAACTGTACTTCTGTGTGTACTGATCAGTG 2408406 31 100.0 34 ............................... TGTCCTTCTTCCCCTTCAGCCGTTTTTCAGCCGC 2408341 31 100.0 35 ............................... GGATTTGGTTGAGTTCATTCACCATATTCGGAGGA 2408275 31 100.0 37 ............................... TTGGACCAACTTGATCCGGAACATGGTTCACCTCCTC 2408207 31 100.0 34 ............................... CCCTCGGAACTGCGATTACCCACGTATACTGGGA 2408142 31 100.0 38 ............................... CCTTCCGAATGTACGCGGCCACTTCTTCGATATCGGCA 2408073 31 93.5 32 ..........G......C............. CCGGCTTCAAACGATCCATGGCCTTCTCAATC 2408010 31 83.9 38 A.C..GT...A.................... ATCATACTGATTTCAAGATAATAGTTGAACTCATCCAT 2407941 31 90.3 37 ..A..............G....G........ GTCATCAATGAGTAGTATGATGACAAGGAACGGGAAC 2407873 31 77.4 0 ...............T.GT...G....TGT. | ========== ====== ====== ====== =============================== ====================================== ================== 10 31 94.5 36 GTTTGAGTTGTATCCATAGTGGAATTGAAAG # Left flank : TTAACGGAGTTGTAACAGGAGGTATTTTTTCTGAAGAATGAAACGAAGTCTGTGAACCTCCCGGGGTTTTTGCAGAATTTTCGGTTCACAGACTTTTTGAGGGTTTGGTATAATGGAGAAGCCTTGATTTATCTGATGTTCACAATAGGGTTTGAGTTGGATCCATGGTGGAATTGAAAGACGCTGTTTTCGCGGCAACGCGCCGACATGCCGGAGTTTGAGTTGTATCCTTGTTGGGATTGTGTGAGGGAGTGTACCGGAACCCCTCTCCTGCTCGTTTCGTTGCGATGGCAAAGGCACTCGCAGGGGAGGGTTCCTCCTTTTTATTCATGTGCGAGAAACCACCTGGCTTAACAGAGCAGTGACGGAAGAGTATCTTTTCTGAATAATGAATCGAAGTCTGTGAACCTCCAGGGGTTTTTGCAGGACTCCCGGTTCACAGACTTTTTGAGGGTTTGGTATAATGAAAAGGCCTTGATTTATCTGATGTTCACAATAGG # Right flank : AGGGAGTGTGCCGGAACCCCTCTCCTGCTCGTTTCGTTGCGATGGCAAAGGCACTCGCAGGGGAGGGTTCCTCCTTTTTATTCGTGTGCGAGAAACCACCTTGAATAACAAAGTAGTGACGGGATGGTATCTTTTCTGAATAATGAATCGAAGTCTGTGAACCTCCCGGGGTTTTTGCAGGATTGGAGGTTCACAGACTTTTTAGGGGGTTGGTATAATGGAAAGGCCTTGATTTGTCTGGTGTTCACAATGGGGTTTGAGTTGTATCCATCGTGGAATTGAAAGCGGGTCTCCATCAAACCAACCATTTCCGAACAGGCTCGTTTGAGTTGTATCCATCGTGGAATTGAAAGCACTCACTTCAAGTCAATTCTGATCGGCTTAACAACGATCGGGGCGGGTGGTACCTTCGGTTTCTGCTCTGGAGTGGAAGTGGGGTGCTGTTGCTCTTGGTTTGAGTTGTATCCATCGTGGAATTGAAAGGTCACGAACAACGGCGG # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:0, 3:3, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGTTGTATCCATAGTGGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.20,-2.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA // Array 4 2410294-2409856 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP034118.1 Staphylospora marina strain SCSIO 07575 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 2410293 31 100.0 35 ............................... AGTGGTTCGGGATCGCTGGGGGTGAAGGATTCCAT 2410227 31 100.0 37 ............................... GTTGTATAGCCGAGGGAAGAACTTTTTCAGGGTGTAA 2410159 31 100.0 38 ............................... GTGTTCAGTCACCACCCATTGTTTGCCGAACTTCCGGA 2410090 31 100.0 36 ............................... ACATACCCTCTGAATCGTTTGCACTGAACCACTGTC 2410023 31 96.8 36 ....T.......................... CACAACAGTTGCCGCTGCTGTGGGCCTTTCGCTTTT 2409956 31 93.5 38 ....T............G............. TGGAAAAACCTCCTTAGAATTTGTCTTTTCCTTACATC 2409887 31 80.6 0 ..........G....CA..........TGT. | A [2409864] ========== ====== ====== ====== =============================== ====================================== ================== 7 31 95.8 37 GTTTGAGTTGCATCCATAGTGGAATTGAAAG # Left flank : GCACGGGGGCAATCAGTTTGAGTTGAATCCATCGTGGAATTGAAAGCCATTTCCTTTGCATCTCCTCCGTGGTCTTCTTGCCCGTTTGAGTTGAATCCATCGTGGAATTGAAAGCCGTTTCGGCGGGTTCAGAATTCGATTGATTGCGTGTTTGAGTTGGATCCATCGTGGAATTGAAAGGCGATTCTAATCACATCCGGACGGTTAATCCGGAAGTTTGAGTTGGATCCATGGTGGAATTGTGTGAGGGATCCGGCCGGCAGCCCTCCCCTGCTCGTTTCGTTGCAATGGCAAAGGCACTCGCAGGGGAGGGTTCCGGCTTTCCATTGGTGTGCGAGAAGCCACCTGTCTTAACAGAGTTGTGACAGAGGGGGATATTTTCTGAAAATTGAATCGAGGTCTGTGAACCTCCCGGGGTTTTTGCAGGACTCCCGGTTCACAGACTTTTTGAGGGTTTGGTATAATGGAGAAGCCTTGATTTGTCTGGTGTTCACAATGGG # Right flank : AAGGAGCCGGCCGGCAGCCCTCCCCTGCTCGTTTCGTTGCAATGGCAAAGGCACTCGCAGGGGGAAGCTCCGGCTATTACCATTGGTGTGCGAGAGATCGCCTGGCTTGACAGAGCAGTGACGGAAGGGTATCTTTTCTGAATAATGAAACGAGGTCTGTGAACCTCCCGGGGTTTTTGCAGGATTCCCGGTTCACAGACTTTTTTGGGATTTGGTATAATGAAAAGACCTTGATTTATCTGATGTTCACAATGGGGTTTGGGTTGTATCCATGGTGGAATTGAAAGGGCACATGCTGAAGGAATCCGCGTGGAGGCGTTGGGGGTTTGAGTTGCATCCATAGTGGAATTGAAAGCCAACTCATACGTCCCACCATCGTGAGAAAGGAAGCGTTTGAGTTGCATCCATAGTGGAATTGAAAGTGAAGAACTCTGGCGACCCCTCGGCCTCCACCCGTTTCGTTTGAGTTGTATCCATGGTGGAATTGTGTGAGGGAGCCC # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:0, 3:3, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGTTGCATCCATAGTGGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.20,-2.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA // Array 5 2411041-2410548 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP034118.1 Staphylospora marina strain SCSIO 07575 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 2411040 31 100.0 34 ............................... GATATCAAAATGTGTGAAATAATGAAACAGGGAG 2410975 31 100.0 37 ............................... ACTGTCCGGACGGTGGTGTCCGTATGAGTGTCTGAGC 2410907 31 100.0 31 ............................... ACAGCTTTCGTATGAGGTGGACGTGGCGCCG 2410845 31 96.8 36 ..........A.................... AGAAACCGAGCATGGGCACTCGCACGGGGGCAATCA 2410778 31 96.8 37 ..........A.................... CCATTTCCTTTGCATCTCCTCCGTGGTCTTCTTGCCC 2410710 31 96.8 35 ..........A.................... CCGTTTCGGCGGGTTCAGAATTCGATTGATTGCGT 2410644 31 100.0 35 ............................... GCGATTCTAATCACATCCGGACGGTTAATCCGGAA 2410578 31 87.1 0 .................G.........TGT. | ========== ====== ====== ====== =============================== ===================================== ================== 8 31 97.2 35 GTTTGAGTTGGATCCATCGTGGAATTGAAAG # Left flank : AGCCATTCCCCGCTCGTTTCGTTACAATGGCAAAGGCACTCGCGGGGAAAGGCTCCGGCTTTGATCATCGCAGGATTCTTGGTTCACAGACTTTTTGAGGGTTTGGTATAATGAAAAGGCCTTGATTTGTCTGGTGTTCACAATGGGGTTTGAGTTGGATCCATCGTGGAATTGAAAGCAATCATTCATGAATTCGATGACATCTTTCTGTCTGGTTTGAGTTGTATCCATCGTGGAATTGGGGTGAGGGAGTCCGCCGGCAGCCCTCCCCTGTTCGTTTCGTTGCGATGGCAAAGGCACTCACAGAGGAGGGCTCCGGCTTTTCATTGGTGTGCGAGAGGTCGCCTGGCTTGACAGAGCAGTGACGGTAGGGTATCTTTTCTGAATAATGAATCGAAGTCTGTGAACCTCCCGGGGTTTTTGCAGGATTGGAGGTTCACAGTTTTTTTTGGGGATTGGTATAATGGAAAGGCCTTGATTTGTCTGGTGTTCACAATGGG # Right flank : AGGGATCCGGCCGGCAGCCCTCCCCTGCTCGTTTCGTTGCAATGGCAAAGGCACTCGCAGGGGAGGGTTCCGGCTTTCCATTGGTGTGCGAGAAGCCACCTGTCTTAACAGAGTTGTGACAGAGGGGGATATTTTCTGAAAATTGAATCGAGGTCTGTGAACCTCCCGGGGTTTTTGCAGGACTCCCGGTTCACAGACTTTTTGAGGGTTTGGTATAATGGAGAAGCCTTGATTTGTCTGGTGTTCACAATGGGGTTTGAGTTGCATCCATAGTGGAATTGAAAGAGTGGTTCGGGATCGCTGGGGGTGAAGGATTCCATGTTTGAGTTGCATCCATAGTGGAATTGAAAGGTTGTATAGCCGAGGGAAGAACTTTTTCAGGGTGTAAGTTTGAGTTGCATCCATAGTGGAATTGAAAGGTGTTCAGTCACCACCCATTGTTTGCCGAACTTCCGGAGTTTGAGTTGCATCCATAGTGGAATTGAAAGACATACCCTCTG # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:0, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGTTGGATCCATCGTGGAATTGAAAG # Alternate repeat : GTTTGAGTTGAATCCATCGTGGAATTGAAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.06%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.20,-2.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA //