Array 1 9390-11370 **** Predicted by CRISPRDetect 2.4 *** >NZ_NHRZ01000029.1 Rhodovulum sulfidophilum strain IM796 scaffold0029, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 9390 29 100.0 32 ............................. AGGAGGGCGGGCTAGCTTTTCTCTCCAGTTGG 9451 29 100.0 32 ............................. GCAGACGCCATGTCACCGAGGAAGGCCTCGGT 9512 29 100.0 32 ............................. ACGCCCTCCGGGCTCATGCCCTACGGCCCCCA 9573 29 100.0 32 ............................. ATCGGTCTGGTCGTAGAGATGCGACAGGAACA 9634 29 100.0 32 ............................. GCAGGCGGCAAGGTCGTGCAAGGTCTGGTCAA 9695 29 100.0 32 ............................. GGATGCGCGGGGTCTCCGCTTCCACCTGCGCG 9756 29 100.0 32 ............................. CCCGGCCTTTTCTGCCTCGCGCGCCGCCTTCG 9817 29 100.0 32 ............................. CACATGAACCCGGAACGCATGATGCGGGTGAC 9878 29 100.0 32 ............................. GCAATCCTTGCACAATGCCGCGAAGATGCTCC 9939 29 100.0 32 ............................. GGCGCGTTCCTGTGCGGTCATGTCTGGGGCTC 10000 29 100.0 32 ............................. CGGCGGGGCATGTCAGTCGTCCCGGTCCCCGC 10061 29 100.0 32 ............................. ACACCAGACGCCGGACGACGGGCCGCACGCAA 10122 29 100.0 32 ............................. GTACTCCTCGACGAAACGCTGCTGTTTCGCCG 10183 29 100.0 32 ............................. CGGTATTCTATGGCGACGGCATCGGTCGGAAG 10244 29 100.0 32 ............................. AGCCGAACAGACCAGAGAACTTTTGAAAGAAA 10305 29 100.0 32 ............................. GTTGTCCGCGGTCCTCGATCCGCCCAGGGCGC 10366 29 100.0 32 ............................. TTCGACCTCGATCATTCGAGTTCCCCGGTTTC 10427 29 100.0 32 ............................. CCTGCCCTGCCCAAAACCTGCTCGCTTCCCTT 10488 29 100.0 32 ............................. ACGCCCGACGAGATCCTGGCGGACATGAATGG 10549 29 100.0 32 ............................. GTATTACGCGGACATTCGGCGGCTACGTTTCG 10610 29 100.0 32 ............................. CCTGCATCGTCTCGTCGTGCATTTGCTGCTGG 10671 29 100.0 32 ............................. CGCGATCGGCCACATCGCGACGGCCTGCGCGA 10732 29 96.6 32 ............................T TTACCAACCGCGTGCGTTTGCGTCGGGTGGTC 10793 29 100.0 32 ............................. GCTGGTGGCATCCCCGCCGATGGACGACACCG 10854 29 100.0 32 ............................. ATATCGTCACCCGCCCCTCAGCAGCGCCGCGT 10915 29 100.0 32 ............................. GGTCGTCGCTGCTGGACAGAGTGGATGGCGCC 10976 29 100.0 32 ............................. GCGCTTAAGCTGGCATTGAACGGCACTTACGG 11037 29 100.0 32 ............................. ATGCTCGATTTCAACTCATCCCCTTCATTGGA 11098 29 100.0 32 ............................. TGTAGAGGTGGGTTTCCCAATGGCGGCGCATC 11159 29 100.0 32 ............................. CTGCGGGAGCGTGAGATGCTGATTTGGGAACT 11220 29 100.0 32 ............................. GGTGCGGGTGCGACGGTGGTCTCCGTCGACCT 11281 29 100.0 32 ............................. CGGATCGCGATGCGCTGATTGAGGCGAGCCGT 11342 29 93.1 0 ...C......................G.. | ========== ====== ====== ====== ============================= ================================ ================== 33 29 99.7 32 CTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : CCGGCCTGCTAAAGAGGATCATTCCTGCCATCGAGGAGGTTCTCTCGGCCGGAAACCTTCCTCGTCCCGAGCCGCCGCCCGAGGCCGTTTCTCCCGCTTTTCCCGATGCGCCGCCGACGGGCGATGCCGGTCACCGATAGTCTATGTTGGTTGTTGTCGTCTCCAACGCTCCACCGCGCCTCCGGGGCAGGCTGTCTGCCTGGTTGGTCGAGGTGCGCGCAGGGGTTTATGTCGGCGACTATTCGGCCCGGACGCGCGAGATGATCTGGGAACAGGTTCTGGCCGGGCTTGATAAGGGGGATGCCGTCATGGTTTGGAAGGCACCGACCGATCAGGGCTACGACTTTGTGACGGCAGGTCAGAACCGCAGGATGCCGGTGGATTTCGACGGATTGAAATTGGTCAGTTTCTTCCCCGAGCCACCAAGCCGATAGGCGGAAGAGGACGGTAGGCTCTTTGACATCGTGGAAAATTTTTTAGATCAACGGCTTGCAGTAAGA # Right flank : GTGCGCCTGGGAGTGAAGCGAGAGCTTGCTAATCATTTCGAATTTAGACTTCCGGTTGCCGTGTGCAAAAGCGTCGTGTGGCCGTGCGTCCGCGCTCAACAGATCGCCTTCCCCTGACCGCCTCGCCGATCCGCCGCCCGATCTCGCCGGGCGAGGGCGCGATCCAGCCGATCAGGGCGACCAGGACGATCCAGGGCGGGATGACATTGACGATGACGGTTTCGACGCGGTCGGCGCGGAGGCGGTTTTCGGATTGCTCCTGGCGGATCTCGCGGGCGCGCGGCCGAACGATGGACGGCGCGTTCTCGACCTTCTGGCCCTGCACGTTTTCGGCCCCGGCCTGGACATTCGCGGCGACACTCGGCCCCAGCGGCACCGGCAGCCCACCGCATCCGGCCAGCAGCATCGCCGCGAGGAGCGCCCTCATGCGCCGCCCCAGCGGAACGGGACATCGGCCGGAACGCCGTCAAGCCCCTCATGGCAGAGCTGGCGCGCCTTGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //