Array 1 4845648-4847115 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP029126.1 Enterobacter hormaechei strain AR432 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 4845648 28 100.0 32 ............................ GTGTTAACTCGCGATGGTGGTGGCCATGTTGG 4845708 28 100.0 32 ............................ TCCATCTCGATGTAGACAAGGGTTTTCCCGTC 4845768 28 100.0 32 ............................ AGAGATTGTTGACGACATCAGGATGATGGGGT 4845828 28 100.0 32 ............................ AATCAGCAGCTGATCCATACAAGGGTTCTTTT 4845888 28 100.0 32 ............................ CGTAGACACAGCGGCAACAAAGCGATCGTAAA 4845948 28 100.0 32 ............................ TGACGACGGCACGACTGTCGCGATGTTTTTAT 4846008 28 100.0 32 ............................ TCGCACGGACGGTGATCCGTTGGGCATGAATC 4846068 28 100.0 32 ............................ GTCCAGGTCTGCGGTGAGCGCTTTTAGTTGCT 4846128 28 100.0 32 ............................ ATTACCATCCGGGCCTTTACCGTTTACTGTTT 4846188 28 100.0 32 ............................ ATGCGTCTCGGTCGATGCAAAGTACGTCCCGG 4846248 28 100.0 32 ............................ ACAGAGTCAGAGACCAGGCCGCCACCGAACCC 4846308 28 100.0 32 ............................ AGCAGGTAGACGACGCGCGCCACAGACTGTGT 4846368 28 100.0 32 ............................ CTTCCCGCGTCGGTCACGCAATCGGACATGAC 4846428 28 100.0 32 ............................ GCGATATCGACGTAGCTGAAAAAGAGACAAAA 4846488 28 100.0 32 ............................ AGTTCAAGGCTGGCATCTTTGAGCAGTATTAC 4846548 28 100.0 32 ............................ GTGGAGTTCGCCCGTTTCTGGGTCGAAGACCA 4846608 28 100.0 32 ............................ GCATTTTGAGGCCCATCGTTTTGATGGTCTTC 4846668 28 100.0 32 ............................ ATCGCATCCTTGACGGGCTTCGCCAGCGCAAG 4846728 28 100.0 32 ............................ TTTGAAGCCGGTATAAGTATCTGCACCAAATG 4846788 28 100.0 32 ............................ CATAACGACACCTTTCAAAATCGTTAATTAAC 4846848 28 100.0 32 ............................ TGATTGAGCATTAACAGGGGCAGACTGTAGAC 4846908 28 100.0 32 ............................ CTGACGGGTCCCGATTTTGCGCTGGGCGTGAA 4846968 28 100.0 32 ............................ CTGCTCTTCGCGAAGACCAGTTAAAACATAAC 4847028 28 100.0 32 ............................ GTAGACCCCGCGATGAATATTCCATACTTAGA 4847088 28 78.6 0 ...................T.A..CCCC | ========== ====== ====== ====== ============================ ================================ ================== 25 28 99.1 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : TCCCGCAAACGCAGCCCGTTTGCCGTTGTCTTGGTGCTTATCTGGACGTAGTCAAAACTGAACTCGCAGAATCAATGTGTGATTTCCGGGTAGTTGAATTTGACGACGAGGCGGAACGGCCGAAGGAAAAAGAGTGGCTTCTGGAGGATACCGAAACCAAATGCGATTACTGCCGGGCATTAAACCACGCGCTGCTGGTGTCGTATTTTGACCGCGAGATGCTGCCCCATCTGACAGGATTGCTGCATGACATTACATATTCGATGGCGGCAGATGTGGCTGCACCTGAATGTGGAAAGCCTGTAATTCATATCATTAATTAAGTTTAGTGTCGTGCGTCGGGGGAGGGGTTCCGGCGCGGTATGGCGAAACCCTTTTTTTGAGCGGTTCTTTAAGTTATTGATTTTTATTGTGCGAATAAAGGCCGCAGAAAAAAGGGTTTGAGGTAGATATGTTGATTATTTTCTTTTCGAACAATAAGATGGCGAAGATTTCTTCCA # Right flank : CCCAAATATTCACTCCAGCTATTTTAAAACCCATAATCATCACCACAATCCTCTTTGTATTTTAAATAAAATCAATACTCATTCACCCCACAACCATATTTCCTCATATATATTATTCACAAAAATAATACATTAAATATGTCAGAGGTTTTTTATCTCGATATTCCGACAATTATTATTCATTTGATACGCGTCACATTTGTCTTCATCTAATCTCCGCTAACATACCTCGCATTCAACATATTGAAATAAAAAGCACTTGCTATGCCAGCGAACAGCATTACCCCATCCGACTTAAAAACCATTCTTCATTCAAAACGTGCCAATATCTATTACCTAGAGAAATGCCGTATTCAGGTAAATGGTGGACGCGTTGAATATGTCACTCAGGAAGGTAAAGAGTCTTTTTACTGGAATATTCCCATCGCTAATACGACGGCAGTAATGTTGGGAATGGGAACATCCGTGACGCAAATGGCGATGCGGGAGTTCGCGCGAGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 4856592-4857458 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP029126.1 Enterobacter hormaechei strain AR432 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 4856592 28 100.0 32 ............................ TCCTCCAGTGCCGCGCCTTCGATCGCTTCACC 4856652 28 100.0 32 ............................ AGCACGAATACAAAAGCAGTAGTCATCAACTT 4856712 28 100.0 32 ............................ CTCAGCTGTAATGCGCTCCACGCTGTTGATAC 4856772 28 100.0 32 ............................ TCCATCGCTACGGCCTGGTTGATTACCATTTT 4856832 28 100.0 32 ............................ GGTGAGCGCAGCAGCATGACGGCGCTGAAGAA 4856892 28 100.0 32 ............................ ATTGCACTGAAACTATCCAGCGCACGGAAAAA 4856952 28 100.0 32 ............................ GTTATGGATTTCGACGCCAGTAGGGAATGACA 4857012 28 96.4 32 ..........A................. TGACTGCCCAGGGTGATTTTGTACCGCCGAAA 4857072 28 100.0 32 ............................ AGTCGAATTGTTGCCAGTCGGCTTTATCCATA 4857132 28 100.0 32 ............................ TGGAGCCTGAAAGGTGATGCGCCAGCTCCGGC 4857192 28 100.0 32 ............................ GACAACATCAACAATCGTCATTGCTGCCATCA 4857252 28 100.0 32 ............................ GATGGGGAGCGGCAAAACACAGGCGCTGCTTC 4857312 28 100.0 32 ............................ GCTACGGCTGCGGGTATGAATCCGGTTTTATC 4857372 28 100.0 32 ............................ TCATCGAGTGTAAGGCTGTGTGATTTTATTGT 4857432 27 71.4 0 ......CA.......AC..A.AC.-... | ========== ====== ====== ====== ============================ ================================ ================== 15 28 97.9 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGCGCCACACGTTCGCTCTCGTCGGGCGTCAGCGTCCGGCCCGTACTTTTGCGGCGGGCAACGTTACGCTCGTTGATTCCCGTGACGCGTAAAATCTCCGCTTTCGACATGTCCGTCCACTCGTGAATATTGTCGAGGACGCTGACGGGTAATCCTTGATTGAGATATTCTATCAGCCGCATGCCTCTGCTTGCAGGCAAACCGGCGTAGCGCCACAGCGTGTTATCAGCCGGCCTTTGCGCAGGAACCCATGTTCTCATGATACCTCCTGAGTGATGTCATTTGTCATGAGTAAGTATAGCCATTTGTGAGGGGGTATGGAACGGGTGTTTTTTGTTCAGGGTGGGGTAAAAGAAGGATGGGAGTTGACCCTAATTTTTGACCAAAATGTAATCTATTGATTTTTCGGTTAAATATCCTGGAGCGCAAAAAAAGGGGTTTGAGCAGGGATTTTAGCTTTTTTTGTATGAAAATCATGATGGTGGAGAGGTATTATTTCA # Right flank : ACCCGAAACAACCCAACCAATCGTTCAAATAATCGACTGTACTAACAAAAAAATAAGGCCGGGTATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCCTCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTCTCAGCGTATTGCCCAAGCGTCACGGTACAACCGAACAGAAAGCGCATTCGTAAAGGGGAGACGACA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //