Array 1 41131-38426 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACGWS010000017.1 Kordia aestuariivivens strain YSTF-M3 17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 41130 46 100.0 30 .............................................. CTGGATTATATAGGCGCACTCGTTAACCTA 41054 46 100.0 30 .............................................. CAGTCCTTACTTTTGGGCGCTGATCCTATT 40978 46 100.0 30 .............................................. CTTTGTATTTTAATTCAGTTAATATTTCAA 40902 46 100.0 30 .............................................. ATGAAGGAAGGATATAAAGGTGTTAAGCTA 40826 46 100.0 30 .............................................. GGGGATTAATAATAGTATTTTACTTTATTA 40750 46 100.0 30 .............................................. AATTCTGGAAGGTTCTCTTGATTGTTCATA 40674 46 100.0 30 .............................................. CGAAATTAGATACAGAATACTTAAGCCTAC 40598 46 100.0 30 .............................................. TTTCTTCCCGTAATAAGTCTAAATACTCAG 40522 46 100.0 30 .............................................. TATTTTAAACAATGCTTTTTCCTTTTTACT 40446 46 100.0 30 .............................................. CTCTCCATTACTTGACATAACGTATGCAAT 40370 46 100.0 30 .............................................. GAACAATTCAAACAAAGTTTCTTTCTTTTT 40294 46 100.0 30 .............................................. CTTCACCAATATAATCAATGAATAGGTTTT 40218 46 100.0 30 .............................................. TCTTCCATTCTCGAAACTTGAATGTATTCA 40142 46 100.0 30 .............................................. TGAATTCTGGAAACAATAAAAATTGGGTTA 40066 46 100.0 30 .............................................. AAAGAGGTATAAACATCAAGAGCAAGACGA 39990 46 100.0 30 .............................................. GTATATAAGCTTTTGCAAAATCTCCGTCTA 39914 46 100.0 30 .............................................. AATTACCATCACATGCACGTTAGACACCCA 39838 46 100.0 30 .............................................. TAAAAGACTGGTCAGAAGTTATCAATGAAT 39762 46 100.0 30 .............................................. AAAGTATAAGTTTTGCGTAACCACACTGGT 39686 46 100.0 30 .............................................. TATCTCTAAGGGTGTATTTCTTCATAATCT 39610 46 100.0 30 .............................................. GTTTGATGCCTCAGAGAATAGTGTATACAT 39534 46 100.0 30 .............................................. AAATGTTATTGATGGAATACAGACAACTGT 39458 46 100.0 30 .............................................. AGCTGATTTGTTTTACTGTTTGCATTACTT 39382 46 100.0 30 .............................................. GTTCATTTTATAATCTTGCTCAGACTCAAT 39306 46 100.0 29 .............................................. TTTATTAAGCATAACATATTTATATTTGT 39231 46 100.0 30 .............................................. GTTAATAATTTTCGTCATTCCTGCGGTAGT 39155 46 100.0 30 .............................................. TTATGACTCATAAAACAATTTCTTTTATTT 39079 46 100.0 30 .............................................. CTTTAATTATTTTTTTAGCGCGCTCCATAG 39003 46 100.0 30 .............................................. AATATCAACATAATGTGCTCCCCCCTCTCT 38927 46 100.0 30 .............................................. CTAAAATAGCCAATGTGTTTGCTAGACTCC 38851 46 100.0 30 .............................................. TTTAAAAGTTAAAGGAATGCGCAAACCTCA 38775 46 100.0 30 .............................................. ATTTTATCTGTTCTAGTCCTACGCTCCCTA 38699 46 100.0 30 .............................................. ATCCATCAATATCAATACACCCTGCATTTA 38623 46 100.0 30 .............................................. AGTCACAAGTGGAACACAAGGCATCGTCTA 38547 46 100.0 30 .............................................. TTTCGTCTCCTAATATTGCACGTGCTGCTT 38471 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 36 46 100.0 30 GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG # Left flank : AGTTACAATTTGAGTTAGTTCTATTTGGTGGTTGGGCAAAAATTGTAGAAGAAGGTGAACAATCAAAAGATTTAGTTACACAAAAATTAACCGCAAAATTAAAAGCCAAGATTTCAAAGATACAAATTAAAGAATTTCCGCTACTTAGAAAAGAATATAGTAAAATCATAAATGCGAAAATGTGGGAAAATGATATTGAAGTTTCTGCATCAGGAAGAAGAAAAAACTATATAAACTTCACGGGAAGTATATTTACCACAAATAAAAACAAACAACTTTTTCAAAAAGAAGTACAGGAAACTTTGAAAATGTTTAGATTTACACAATCGAGATACAGATGGTATGAGGGAGAAAACAAATATACATATTACACAATATATAAAGGAAAAGATAGTGATTTAGTCTTTTTCTAATACCATACAATTTAAGTTATATCTCTTTTACACTTCGGTATAACTAAGCAGTCACAAGTGCGGAGAAAGAGGGGTTCTCACCCCCGA # Right flank : GTCAATCCCGAAATGTTGCCTAAAATCAGTACTTCGGGATTACTTTTTAGAATTTAAAAAATGCATCTTATTGAATCATTTTTTAGAGTCTTACTCCATTTTTTTTATCCTAAAACAGTTCTAGTTGTTGTATAGGTTGTGGAATATCTATAGGCTTTACACCGTGAAAAAGTTCCATTTTCTCAAATTGCTTATCGGTTATTTCTAAAATACAGACTTTCCCATGTTTGGGTAATATACTTTTAACTCGCTTTGTATGCACTTTAGCATTTTCTCTGCTCGGACAATGTCGAAGATATATGGAAAACTGAAACATTGTAAATCCGTCATCAATCAGTTTCTTACGAAATTGTGAAGCGGCTCTGCGCTCTTTTTTTGTTTCCGTAGGTAAATCAAAAAATACTAATACCCACATAATTCTATAGGCATTAAAACGATTTGTATTTGATAACATATCATAGTAGTATTAATCAAGTGTTGGGTATTTTATGTGTCGTTGT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.39%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 1 276406-275879 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACGWS010000002.1 Kordia aestuariivivens strain YSTF-M3 2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 276405 36 100.0 34 .................................... AATAAACAAATTATAAATCTTTAAAACAACAAAA 276335 36 100.0 32 .................................... AAGTACTCACAAAAGAAGAACAATCTAAAATC 276267 36 100.0 35 .................................... TTTGTGGTTATGGAAAGTAGTAAGCAATACTTCTT 276196 36 100.0 36 .................................... ACGAGCTCCAAGCTGGTAACATTAACAGGTTAAAAA 276124 36 100.0 35 .................................... CATGGAAGCATTCGAGTATTATGACTTGCGCGAAG 276053 36 100.0 34 .................................... TATCAACAAAGTTGGAGAAATCGTAAACATTGAG 275983 36 100.0 33 .................................... CTGAATGACAACATTAGTGAGTACTCCATTCTT 275914 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ==================================== ================== 8 36 100.0 34 GTTTTCACGGCGTCAAATGCCAAGTACTTTCAAAAC # Left flank : GATCGTTATTGATTAAAAACACGGGACGATCTACTGTCTTAATAATACTTTGCTCAGCACGTTTGTATAAGTCCATTTCTTCGGCTAAACCGTCAATGGAAGAATTGAAAAGCATATCAATTATATGAGCATCTTCTTTGTCATTTAAAAATGTTTTAAGGCTTTCGAAAAATGTTTCTTCTGTTTTAAAGTTAACATTACGTTCTATACTCCCAATAATTTCTTTATTTTGATAGTATGCCTCTAAATTAGCCAAGACTTCTTTTGGAGATTTTGGTATGTTTTCGTTGTCTGAAGTTTGTTGTGTTGATTCCATACTACTTGTTTTTAGTTGATGACAAGTACGTCATGAATCGTAAAAATGACAATACCTTGATGAAGGTATATTTTGTTGATTTAAATTTTAGCCTCCTTTGTTGTTAGATGGAATGTTTTACTAGTGCTTATTTTTACAAGTAATTTAAATACTTAAAACCAATTAAGATGAGTAATTCAGTTTT # Right flank : CCGTAAATTTTCAATTTCAACAATAGCAAGGATTTCAAAGCATTTTTTCATTTCTATTTTACCCTTATTATGCATTGGTTCAATTTTCGTGAGTATTTAAAAGAGTATTTTTTAAGTCTCATTAAAGTTAACATTTTCTATATAATTTTTAAATTTATAAAGGTTTTCAGTTTGTTTTAATCAAAATCATAACCTCTATTCAATACATATTTTAGTAAAGCATCACGACCTTCTAAATTTAGTTTCACTATCATATTTTTACGATGTGTAGTAACTGTATGTTCACTAATGATCAACTTTTCAGCGATTTGTTTATTACTTAGACTTTGACCGATGAGCTCTAAGATTTGATTTTGCCGTTTGGTTAGCTTATCCTCTTTTTTTATGTTGGCAGTAGAATTTTCATCTTCAAATGGTAAATCAGAATCATAATATGTTTTCCCATCATGTACTTCTCTGATTGCTTGTAAAAGTATCGGTAATTTTGCATTTTTAAGTAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCACGGCGTCAAATGCCAAGTACTTTCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.70,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //