Array 1 1818170-1820214 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJFOD010000001.1 Psychrobacter sanguinis strain FDAARGOS_1599 ctg.s1.000000F_arrow_pilon, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1818170 29 100.0 32 ............................. CCCCTGCATACTTATGCTGTGATGCTACTGCT 1818231 29 100.0 32 ............................. TCCCAGCAACTGCTTAATTAGCACACTGCCAG 1818292 29 100.0 32 ............................. CGGTGCGCTGCTTATAGGCTCTTGATTAACCG 1818353 29 100.0 32 ............................. CGACTATTCTGATTGGCAACCTGCGTGTTGTA 1818414 29 100.0 32 ............................. AGATACCTAGCAGCTCAATTGACATGATTTTA 1818475 29 100.0 32 ............................. TCTTTAATGTTTTGATTGTGCAAATAGATACG 1818536 29 100.0 32 ............................. CTGCGCAATGCAACATTTGGTTTTGAGTTAAC 1818597 29 100.0 32 ............................. CCACAGCTGGCGGCAAGTCATCGCCTTTGATT 1818658 29 100.0 32 ............................. ATTGATATCTCTACCGCCACACAATGACAACC 1818719 29 100.0 32 ............................. TTAAACCCATTTGAGGACTCGGCTACACTCCC 1818780 29 100.0 32 ............................. CTCATGGCTACGGTTGAGTTGATAGATGGAAA 1818841 29 100.0 32 ............................. TCTGCAACACCGTTGGCTTGTCCATTGTGAGT 1818902 29 100.0 32 ............................. CATTGGCACCAGAGTCCTTAGCCGAGGGCTTA 1818963 29 100.0 33 ............................. CTCACCTGTTGCCTGCCGAAAATGATTTAATGA 1819025 29 100.0 32 ............................. ATTGACGACCCACAATTCTTAGGGTTGGTCTA 1819086 29 100.0 33 ............................. TGGGCAATATATTTTTTAATAGCTTGAGTATCG 1819148 29 100.0 32 ............................. ATTATGAAGATGAGATTATCGCTCCAGCTGAT 1819209 29 100.0 32 ............................. TGAGGCGGATCAAACACAACCATGTGAAATTG 1819270 29 100.0 32 ............................. TATTGAGTGTCGCTTTTTGATGCTGGCTGTAT 1819331 29 100.0 32 ............................. CGATTTGAGCGAACAAAAAACCAATTCCTATT 1819392 29 100.0 32 ............................. TGACCGACTACGAGCCTAAGCGTGAAGGAGGG 1819453 29 100.0 33 ............................. TTTGATTTAGATCTAGCTGCTATTGTGCATGAC 1819515 29 100.0 32 ............................. TTCTTGGGCACCATTTCAGACGCTGCTAACAT 1819576 29 100.0 32 ............................. ATTGCTAAATTACTCATAATCTTTTGCCTCCA 1819637 29 100.0 32 ............................. TGATATGCCAAACCCTAAAGACATAGCGTTAT 1819698 29 100.0 32 ............................. GATACCAATGAAACTATCTTATATATTAAATC 1819759 29 100.0 32 ............................. GTCAGGTTGATGACATATCAGCGGACGGTAAA 1819820 29 100.0 32 ............................. TCACTCATAATTGGACGTTTATCCGGTCTGTT 1819881 29 96.6 32 ............A................ AAGATTTTAGTGGCTTCAAGGAAACAGCTGAA 1819942 29 96.6 33 ............A................ AAACCAAACTTCTCAAACGTACCTTCAATTTCC 1820004 28 93.1 32 .....-......A................ GCACTTTAGATAAGATGCAAAACTATATTGAT 1820064 29 93.1 32 ............A......A......... GATTAAAGAATGGCAGTATCATCACTTGGTAG 1820125 29 96.6 32 ............A................ AGTTTACATGGTGCGTCAATGCCGGCGCATCG 1820186 29 96.6 0 ............A................ | ========== ====== ====== ====== ============================= ================================= ================== 34 29 99.2 32 CTGTTCCCCGTGTATACGGGGATTAACCG # Left flank : ATAAAGGCAATGACATTGCGACTGCGCATCCACCGTACTTGTAGCATCGGATTTTTGCGATGTGTTTCAATCCATAACGCAATATTAATACACACGAAGGCAATGATGAGCGGATAACTCAGCCAGGGCGTAGTCCACCATACAATCCGCCCTTGCACTAAAAATACGCATAGAGCAGCAAGCCCCCCTGCAAAGAATGTAAAACTCAAGATATCGAGTTTTTCAAAAACTTTGTCCGTCTTGCCAGGCGGTAGCTCTAATAGATTGATTAACCCAAAACAAAGCAGCGCCAGACCAAATTGAAACAGAAACAAATTCTCAATATCACCTTCGACCGCCAGATAAGGTGAGACAATACGGGCTAAGGGAGTGCCAAACTGGACTAGGCCAAACCCCAAAATCATACCACTGATACGTTTTGCTACAGGCATACCCTGTAACGAGTAAAAAATCGCCAGTACTGTCATTGCACTGGCAGCAATACCACTGATACCACGAGC # Right flank : GCAACTAAGCTAATTCCTGTAACAGGTGCTAACCTGTTTTCTTTTATGATAAGTCAGACTCTAAATAGCGATTATTTAGAGTCTGGAATACAGTCGAAAATATTCTTTTGCGTCTATTTATTAAAGCCGCGATCCTCAATATAACTATCAAAAATACTTTTCATTTCAGGCTCAAACAACTTGATATAGTCATGAGCGATACCCCGACTTCCACTAGGGTGAGGAAATCCAATCACCTGACACTGCTCAAATTTTTGAAAACTGATTTTAAACCTAGTATGAGTGGATTGTTTTTGTACCATCTGCCTTTTTTCTACAACCTCACCCATGACAGCCTTAAACCTCGGTAACACTTTATCATTTTGAAGGTAGTCCATTAACTTACTACCCATAAATATAATAATCTTTGGTTTAAGTACTTCGACATGATGAATAAAGTTATCAATTTGCTCTGGCTGCAAAAACTTATTTGGATCACTATCTTTTAATGAGTTACCTTG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGTGTATACGGGGATTAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTGTATACGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.30,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1860570-1864384 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJFOD010000001.1 Psychrobacter sanguinis strain FDAARGOS_1599 ctg.s1.000000F_arrow_pilon, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1860570 32 100.0 33 ................................ CCGATAACCCCCGGTCACACCCCAGTGACAAAA 1860635 32 100.0 32 ................................ TACCGCTGAACAGGCAGGTCTTGAGTTTAAAA 1860699 32 100.0 33 ................................ AAGCACTACTTCAATATATTCAAGAATATTCTC 1860764 32 100.0 32 ................................ GCTGACGCACTACGCAAAGAAAGGCGGCAGGG 1860828 32 100.0 34 ................................ TTAGGTGACGGCAAGCTAACAAGCGAAGAAGCAC 1860894 32 100.0 34 ................................ GGCGGATTGTCTGGCAGTATCGCCACAAATGAGC 1860960 32 100.0 33 ................................ AATCACAGCGCGGCCATTGTAAACAGTGATAGG 1861025 32 100.0 34 ................................ ACAGTAAAAGGCGCAAGTCCGGCTATGAGCACCC 1861091 32 100.0 34 ................................ TGCAAGCTCTTTAGTGTACATATCAGCCCATTGT 1861157 32 100.0 32 ................................ ACAGAGTCAGAGTGTAATGATGAGTAACACTC 1861221 32 100.0 34 ................................ TCACCTTCAATCTCTGCATCATCAGGGATGTCCT 1861287 32 100.0 34 ................................ TATCAGATTGCTCGAATGATTGGTGTAAAAAAAA 1861353 32 100.0 33 ................................ AGATACAAGTTGTGCTGCTATATCACCTGTATT 1861418 32 100.0 35 ................................ GCCTTTGACCCAGCTACTCCAGTCACCCTTAAAAC 1861485 32 100.0 33 ................................ TCTCTATCGTGTCCAACAACCTGTCGCTCTGGC 1861550 32 100.0 33 ................................ CCTTTAACGGCTCTCCAGAGGCGTGCAACAACC 1861615 32 100.0 33 ................................ TCTACATTGGCATGCTCGCCTGCAAAACCATCT 1861680 32 100.0 33 ................................ AGGATTGTTAGCGTCAATCATGGCTTGAACTAT 1861745 32 100.0 33 ................................ CTATCTGATGGAACACGCTTCAATCTCACCCTT 1861810 32 100.0 34 ................................ TAACAATCTCTAAGCAAGCGATATATTTATTACC 1861876 32 100.0 33 ................................ ATGCAGGCTTCTTTGAAGGCGAGAGTGTGGTTA 1861941 32 100.0 32 ................................ ATGCAAAAGCGGTAGTGTTGACGTTGCACTGC 1862005 32 100.0 33 ................................ TGTCGATCAATGGCCGAGAAATCACTGTCAGCA 1862070 32 100.0 34 ................................ GGCGGATTGTCTGGCAGTATCGCCACAAATGAGC 1862136 32 100.0 32 ................................ ATCACAAAATGCAGCTAATGCCATGTGTGCTG 1862200 32 100.0 34 ................................ TTGTTTTTGATTATTGTTGCAGCAATGCTTGTTG 1862266 32 100.0 35 ................................ TGCAGTGCACCTTTATGCGCGCGCACACCTTGCAC 1862333 32 100.0 32 ................................ CTTGTACATCAGGCAGGGTAAGGTTTACTGGT 1862397 32 100.0 32 ................................ CTGTTGACAAAGGTGATGAATGTTTGCTTGTA 1862461 32 100.0 33 ................................ AATAGATGCGGGTTTGTATTTTGTAGAGTTTGC 1862526 32 100.0 34 ................................ TAATAACTGTCATTTATCTGAAACAGGTGGCAAG 1862592 32 100.0 33 ................................ GTTTATCGTGAATGGTGTAGACGCCAAGGCGAA 1862657 32 100.0 37 ................................ CTATGCGACCGATTGTTGAGAGCATGGGGTTAGCGTG 1862726 32 100.0 33 ................................ GATACATTCGATGCCGCTCGGGTGGCTTGTGTA 1862791 32 100.0 35 ................................ CATACAGTGCAAGTGTCAACGACAGCAGAAAACCG 1862858 32 100.0 35 ................................ CTTTATAACTTTAACGGGGTAGGCATTAAAAGTGG 1862925 32 100.0 33 ................................ AGGCGTACTGTAGACATCGAGACCAGTTGCAAA 1862990 32 100.0 32 ................................ TTGGTTTTAGTATCTGCTAGTTCAGTTAGATA 1863054 32 100.0 32 ................................ TTGCATAATAACAGATTGACATGCTCCCACCA 1863118 32 100.0 32 ................................ TCCATTCACAGTCTTCGTAATTAGAGCTGATA 1863182 32 100.0 34 ................................ TGTTGACAAGCAGTTAAATGTTGCACCAAAAGCA 1863248 32 100.0 33 ................................ ACGTCCTCAACCACTCGCTCACCTGTCCTAGTG 1863313 32 100.0 32 ................................ ATGCAATCGCTGCATAATCAGAATCATCGGCG 1863377 32 100.0 32 ................................ GTCAGCTCTAAATAGCTGCTGCAATTTGTCGG 1863441 32 100.0 33 ................................ ACTGTAGATTGTTGGCCTTCCGCCTTTATCTTT 1863506 32 100.0 34 ................................ TGTTTTAATGCCACTTAAAGTCATATTGCGGTCA 1863572 32 100.0 32 ................................ TTAATCTTATGGCTATCACAGGGGTTCAAGAC 1863636 32 100.0 33 ................................ ACGCCTACGCACAAGGCCGTTTAGAGTACGACC 1863701 32 100.0 34 ................................ GGGCAGCTCAATGTCTTTTAGCTTAACTGAGCGT 1863767 32 100.0 33 ................................ TCAACAACCTTCCATAGCTCGGGCTTGGTAAAT 1863832 32 100.0 32 ................................ TTGGACAGTCAGCAAGGCATGCCTTTTTTGTG 1863896 32 96.9 33 T............................... GAAGAAAAAAAGATTAGAAAGCGTTTAGCATTA 1863961 32 96.9 34 T............................... ATAAGGCGTAGCGGGCAGCCCTCCGCTCTCAAAT 1864027 32 96.9 34 T............................... TAGTCCGTTAGTACGTACGGTGTAGTATTTACTA 1864093 32 96.9 34 T............................... ATTTACGCAAAATTCAATGTCATCAATAGCTTTG 1864159 32 96.9 32 T............................... GCCAGTGATTGCTTCGGTGGCATCGCTACCAA 1864223 32 96.9 33 T............................... TCATAAAATCATCGGCCCTTGCTTTGTTGGTAA 1864288 32 96.9 33 T............................... TACCAATAGATCAACCAAACGAGAAAGTCCTTT 1864353 32 96.9 0 T............................... | ========== ====== ====== ====== ================================ ===================================== ================== 59 32 99.6 33 GTCGCACCCATCACGGGTGCGTGGATTGAAAC # Left flank : AAACACTGCTTAAACTTTGGTCAACGGGTGCAATATTCTGTATTTGAAATTGAAGTTAACCCTGCGCAGTGGACGACACTTAGAGCCACCTTGGAGGGTATTATCAACCCAGAGACCGACAGCTTGCGTTACTACTATATGGGCAAAAACTGGCAACATAAGGTTGAGCATATTGGTGCAAAACCTGTGCTGGACCTTAATGATGTGTTACTATTTTAAAGTGGTATTATGAGAAATTATTTGGGGCTATTACTTAAAGTGAACCTGTTATTTTCTTTTAGTTGGTTCTCTTAGTTCTTTTGCGAACCCTAAGCACTCATAAAAACCCTAGAACTCTCGCAACCCATGCACAATACTATTTAACAACATGATTTTAAACACTTTATTGTCTTACGTTACTCATTTGGCAGATGTCACGTTTGCCAAATTCGCCTATGTTTTACACGCTCGCAGAGTTCAGGGTATTAGTCTAACCCAATCAGCGACTTAAACCATAGGCG # Right flank : CGCACCCGGAATTAAAGAATCGGTGGTGGTTCAAAAATTAGGCTGAAAAAAACAGGCTGAGAAATTGATAAAATAGTGACATGCACATCACACTCTACATCAAATGCCCAGCCTGTCTAAGTCACAGCATAAAAAAATGGCTTCAAAAGCTATGCTAAACAAAACTATAAATGCACAGACTGTAAACGGCAGTTTATAGGTGATGATGCCTTAACCTACCAAGGCTGTCACTGCCAAAAAGATAGCAAAATACGGCATCTTATGGTACGAGGCAGTGGTATAAAAGACATCGCTACAGTTGAGAGAATCAGCAAAGGCAAAGTACTAGCTACCCTAAAAAAGTGTCACTACCAAATAACGCCCAAACAAAGTCAATACGACTGTCTTGAAGTTGATGAGCTATGGACATTCGTAGGTAAAAAGACCAACAAGCAATGGCTAATTTATGCCTATCACCGTAAAACAGGTGAAGTTGTTGCCTATGTTTGGGGAAAACGAGA # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCATCACGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTCACGGGTGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.90,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //