Array 1 234845-233889 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP007775.1 Campylobacter lari NCTC 11845 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    234844	    36	 100.0	    29	....................................	TGAAATATATTCTTCTTTATTAGCTAATT 	
    234779	    36	 100.0	    29	....................................	TGAAATATATTCTTCTTTATTAGCTAATT 	
    234714	    36	 100.0	    30	....................................	TTTAAAGCTGTTGCATTTGGATAATATCTT	
    234648	    36	 100.0	    30	....................................	TGAATATATAGAAGGAATTGAGATAGAATG	
    234582	    36	 100.0	    30	....................................	AGAAATGAATGTGATAGCACAAAACGAGCA	
    234516	    36	 100.0	    30	....................................	GGTTATACGATATCAAAATTTTGTGCTACG	
    234450	    36	 100.0	    30	....................................	ACAAGCTGTTCTATTTTAAGTAATGCATCT	
    234384	    36	 100.0	    30	....................................	TCAGCTAACTTAGGTCTTTGTGAAATTTTA	
    234318	    36	 100.0	    30	....................................	TTTTATAATATGGAGGCATATATGAACTTT	
    234252	    36	 100.0	    29	....................................	ATATAATATCAGAGGGTATGGATGCTATA 	
    234187	    36	 100.0	    30	....................................	TCGCCCTTAGTCCATTTAAAACCTAAAGCT	
    234121	    36	 100.0	    30	....................................	ACCAGTTGGGTAATTATCAAATTTCCACAC	
    234055	    36	 100.0	    30	....................................	AATATGCTCTGATGGGACTAGATTCGATAT	
    233989	    36	 100.0	    29	....................................	CAAGATTTTGATACTATTTTGTGTGACAA 	
    233924	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        15	    36	 100.0	    30	GTTTTAGTCTCTTTTTAAATTTCTTTATGATAAAAT	                              	       

# Left flank :   ATAGCAGCGCTAATCCCTGCTTTTTTTATTTTAAGGTATTTAGGCGTAGAAACTTTAATCTTACTTGCTATTTTACTTTTTTTAATCTCTATAAAAATCATCGATCAGTATGAAAAACAAACAGGCAAACACGATGATAAACACATCGTTATAGATGAAGTTGTAGGGGTGTTTTTAGCCTTGGCAATTTGCGGACAGAGTGTTTTTACTTTTTTACTTTCTTTTGTTTTGTTTAGATTTTTTGATATCACAAAACCTTCTATCATAGGTAAAATTGACAAAAAAACCAAAGGCGGTTTAGGGGTAATGCTAGATGATGTTTTAGCAGGAATTTTCGCAGGATTATTTAGCGCTGTGATTTATGGAATTTTACTTAAATTTGATCTTTTGTGGTTTGATATAAGCATTATGGAGATATTTTAGCTTCATAAATTTGTGAAGCTATTTTCTAATTTTCTTTAGAGTAAAATAACAATAATTCTAATTGTATTTGCTATACG
# Right flank :  AGACTTTTATCAAACAAAGAAAACTAGGTGTTTTTCTATAGAAAAAAACCTAAAATATGTTATAATTCTTGCTAAAGAAATTTAAAAAGAGACTAAAATAAGTGGTTTTTGGTCATCCACGCAGGGTTACAATCCCTTTAAAACCATTAAAATTCAAATAAACTAGGTTGTATAAACTTGGTTTTTTTCTTTTCTTTGTTTATTTTTTCATTACTATATTTAAAATCTTTACTTTTTTCATCATATTCAAATAAAACTAGATTTTTATCATCATTCATTTTTTCATTAAAAGAAACCCCACCTAATAAAATTTGCATATTATCAAATTGTTTTTCTGTTATGGTTAAAACTCTTATATTTCCATAAGATGGTAAAATTTTCTCTATCGATTTTATCGTTGTTTTTGCCGAAGCTGATCCTTTACAAATTTTCACATACACACTAAATTGCATCATGAAAAATCCAAGCTTTATCAATGAGTTTCTAAATTTATTTGCGTT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTCTCTTTTTAAATTTCTTTATGATAAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:83.33%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 95% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [76.7-78.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,4.5   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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