Array 1 1244-232 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAJBN010000016.1 Ligilactobacillus salivarius strain VA40-10 NODE_16_length_46449_cov_158.296706, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================== ================== 1243 36 100.0 30 .................................... TTTGTCGTTGACTGTTAATACCTTCGTGTT 1177 36 100.0 30 .................................... ATAGAGCATATACGGCTGGATATAGTACGG 1111 36 100.0 30 .................................... TTGCTGAAAGGTTAGGTCACGTTGACGATT 1045 36 100.0 30 .................................... AAGTAAATTTGCTAAACCATTTAAAAGCAT 979 36 100.0 30 .................................... GTGTTAGCTTTGCTGGTAACTATACTTCAT 913 36 100.0 30 .................................... CTAAGCATTCACCAGAACGCATACCAGAAT 847 36 100.0 30 .................................... AAAGAAGTGGAAATTGATTGCTTATATTGT 781 36 100.0 30 .................................... TGCAGTTCTGGCACCATTAGCTAGTGTCCT 715 36 100.0 30 .................................... TTAACACCAGCGTTAACAGGGGTAGCTATT 649 36 100.0 30 .................................... ACAAGCAAGGCAAATTTAAAGAAAATGAAT 583 36 100.0 30 .................................... AAGTTCACACGAAAAGCCCTATGACAATAC 517 36 86.1 29 ..........T.........T...A......G.C.. ATCTGCGTTCAGTTGGTGTCTCAATGCTC T [483] 451 36 94.4 82 ........................A..A........ ACAACTGGAGTTTGAGTACGTTTAGCTTGTGTTTCAGAAGTATGTTAAAAACCTATTATATGTTATAATATGAAAGTGTTTA 333 36 83.3 30 .....G....T.........T.........G.T..T AGTAATTCACCGCTAGTTAAGTGGTTTTTT 267 36 80.6 0 ..........A.........T...AG...CG..G.. | ========== ====== ====== ====== ==================================== ================================================================================== ================== 15 36 96.3 34 GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Left flank : AACAGACCGAATTAGTAAAAAGTATATGAATGTATTAATTAAGAAGATTATTGAAGACATCACAGACGATGAAAGACAAGCAATACTAAAATCAGTAAATAGTTTGTATGATCGTATTCGAGAGGTTTTGTATAAAATTGATATACCATTACAAGTAGATTATGACAATGATTTAACAAGACTATTTAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTGCATGTGGAACTAAATAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAGGTCTTGTTAAGGCGACTAACTCATCAATGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAGCTGTGATAATTACTACATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAGTAACG # Right flank : CTAAAATACAAAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTAAGATATATTATGGTTGATAAGTAAGTACTTTATAATGAGCTGAATATGAAAAAATTTGAAATCCCCCTATACTATTATCATAAAAAGTATAGGAGGATTTTTTATACAATGGAAGAAACTGAAATTGTTGAAGTAAAACCAACTA # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:-0.25, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [21-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //