Array 1 496094-496989 **** Predicted by CRISPRDetect 2.4 *** >NC_015389.1 Coriobacterium glomerans PW2, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 496094 29 100.0 33 ............................. AGCAATTGGTCAGATGATCATTACGATGATGAT 496156 29 100.0 33 ............................. CCCGACGGCTCATCGGCAGAGACCATCTCTCGC 496218 29 96.6 33 ............................T GGTACGACACGCATCCCACGACATCCGCCACGG 496280 29 100.0 33 ............................. CCGGACTGACACCGACGTGTCCGCAGGTGAGCC 496342 29 100.0 33 ............................. ACTTCGGAGTCACCACCGAGGCCGCGCAGGAGA 496404 29 100.0 33 ............................. ATATCGGTGCGCGCCGGCGACGACGCGCTCAAG 496466 29 96.6 33 ............................T GTGTTGGCCCGCAGTCGCTTGGCCTTCTCGATC 496528 29 100.0 33 ............................. GCCAAGGACCTAAAGGCGCTCGACCAGATTGAC 496590 29 96.6 33 ......T...................... CTTTGAGGCAGACGCGCGTTTAGAAGAGCCCTT 496652 29 100.0 32 ............................. TCCAACGGAGAGTACCATTCGAGCTGCGTCGA 496713 29 93.1 33 .........A..................T ATCAATATATACGGCACTGCTGGGAACGGGATA 496775 29 93.1 33 .....T......................G GTCGCGTTGCCCTGCGTGGCCGACATGGCCCAG 496837 29 100.0 33 ............................. TCGACGAGTGGGCTGCGCCTGTCGAAGTACATC 496899 29 89.7 33 ...........ATG............... GACAGGATCGCGACCACCGCCAGTGTTGTCAGC 496961 29 93.1 0 ...........A................T | ========== ====== ====== ====== ============================= ================================= ================== 15 29 97.3 33 GTGCTCCCCGCGCATGCGGGGATGATCCC # Left flank : GGGTGAAGTCGCCGCAGGGCGATCATATGGAGACGAAGAAATGATTGAGGTACAAGAATGACGATCTTTGTTCTTACACGATGTCCGATCGGGCTTAGGGGAGATCTGACGCGCTGGTTGCTTGAGATTGCTCCTGGTGTATTTGTTGGCTGCATCTCGGCGCGAGTCCGCGAGGGGATTTGGGGGCGCGTTCTTGCTGCCGTGAAGGAGGGTCGTGCAATCATGGTTCAAGCTGCTCAAAATGAACAGCACCTTAAGTTTAGCGTACATCAAGCGGATTGGCAGCCTTTCGATTGCGATGGAGCCCTACTGATAAAAAAGCCCTATGGAACCGAGGATTCAACATTGGTTGGACCAGTTGCAAAAGGATGGAGCAACGCAAGTAAGTATCGAAAAATGAAAAAGTTTGGGAACCAATGAAACTGTGTGCTGCGGATGTAAAGCACTTTTGCTTTAATAAAAACAGCTACAAAGATGGGTTTCATACCAGATAATTAAGT # Right flank : TTTCGAGCTGAAGCTGCCGGATGCCCCCCCCCGCATACGAACAGCTAATTCTTTTTACGCAAAGATTTAATGAGGTGACATCAACGTAGTTACAGAAAGGGAATGACCTACGCTCAGTACATTGCAGAGTTCATTTTGCCTTCTGCAGTTTATTGGCATTTGCAGTGATCTATCAGAATTTCTCTTAGTAGATGCGTAAATCTGATGCATAAAAAAGTATCTTCAATTTCCATAGGAGAAGTTTTCTCTTTCATCCCATTCAAAATTCCGATCATGATAACACTTAAATATATCACCATGGTTCCGCTCATTGTAACAGGGCGACTTATGATCTCACGATCGTCATCTGGGTAAGATACCCCCATTTGACATGGACGTGTATACTGTGTGGCTTGGTAGCGCCATGTTGAGGCTGGACCCGCGCCTGCGCGCGCAGCGGAGGTTGAGCCACAGCGTCACATGATGTAGGTGAGGAGTTTTCTTGGTACTCGTAATCGCTG # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCATGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGATCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2042806-2042179 **** Predicted by CRISPRDetect 2.4 *** >NC_015389.1 Coriobacterium glomerans PW2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2042805 36 88.9 30 TCCT................................ CGCACCGTTGCGCTGTCATCCTTATTTGTG 2042739 36 100.0 30 .................................... AGCCAATAACGCTTCCTCTCCATTTTCTCC 2042673 36 100.0 29 .................................... CCGTTGAGGGGTGAGCCGGTAAGAATAAG 2042608 36 97.2 30 ...A................................ TAGCTGTCATCCTCCTCAGGGCTCCATGCA 2042542 36 100.0 30 .................................... CCGGCCTGCTGGTCGATCTTGGTCTCCATC 2042476 36 97.2 29 .....................G.............. AAATGCGTCCATTTGCACGGTGGTTTTCC 2042411 36 100.0 30 .................................... CGACGATGCCCGCACCAGCACTGCCTTGGG 2042345 36 100.0 29 .................................... TCCATACCCTTCCTCTCCCATGCTCGGTA 2042280 36 100.0 30 .................................... CAGCCAGCTATTTTTGTCGTAAAAGAGGGA 2042214 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 10 36 98.3 30 GTTGGATTACCAGTCAGAACGACACTGCTCCAAAAC # Left flank : TTCTATCATCCATCATGATGGACATGTCAATATCATCAACATGCATACCTTGATTCATTTTATTAATGATGAACGGCACGTTAATGGACCCTCTTTTTGATTTCCCTGTCCATTCTGGGTCCAAATGCTCGTCTTCCCTTAGGTATGATGAGAACATTAATCTTCTGTTACCGTATGTTAAGCGCAACTCATTCATGATCATTGATCTTTGGGATTTAAAGTCAGTTCTTTCTTTAATGCTGGATTCAGTTGAGCTATTGCAGAATACCAATATCTTGATACCGGAGCCTGATCTGTCTCCTCTTTCAATTAACTCATTAATGGATTCACACAGCACTTTTCTGCTATGCTTGCAAATACCATCTTTATTTGTGGCTTCAGATATGCGTGATTTTTTACGCAAGGACAGCAATTTTCCTTTAAATTGCATAACTTTTGGTCTGCTATCAAGTGGGAATATGTGATATTCGGGCATGTCCAGTATCCCAGACCTAACGCAT # Right flank : CATTGGATCAAAATCTTCTCTGCGCGGAAGACGCCCGTCCTGACCGGATATACTTGCTATTTCTCGATAAAGTCCAGGTCGATCGTAGTTTTTATCTCATTTTCGTGTCTATTCGGATCTGCTTTGTTTTCAAGGAGCAGCACCCTTGTTTTTGAGAAAAAAACGTGTTCGTACAGCTTCTCAAGTTCAATTTCTGTCAAAAAAGTTTTGAGATTAACGAACACCATTACTTTCGAACACTGGATGTCAAGAACAAAAGATAAGAAATCTATCAAATTGTCAAGGAACGTTTCTTGCGGGTTTGGATGGGCTCCAAACCCGAACGCTTTGATGAAGCGCTTGAGATCCCATTCTATAGCAAACGAATAGTCTCCGTACATGCTTAGTCCCAAGGAGGCTACTTGTGATGAGAGCGCGACTGCTGCATCTTCCAGCGTGCGTCGAAGTTCCTCATCTTCTATCAGCTCTTTTTCAAAGCGTTTCGATATCGAGCCCATCAG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGATTACCAGTCAGAACGACACTGCTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: R [matched GTTGGATTACCAGTCAGAACGACACTGCTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.70,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //