Array 1 297652-298344 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABXOU010000005.1 Enterobacter sp. RHBSTW-01064 RHBSTW-01064_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 297652 28 100.0 33 ............................ AGAAGAAAGTACCGATGACGAACTCGATCCGAT 297713 28 100.0 33 ............................ ATTGCAGTGATACAGCTCAAACTCATAACGATT 297774 28 100.0 33 ............................ AATGAAGGGAAGGCACAGAGTACCTACCCTGAT 297835 28 100.0 32 ............................ GATACATACGGCTCTTTCTTTGGCTTGTACCC 297895 28 100.0 32 ............................ AGAACAGAAGCGCAAGCATCGCCGCATCATTG 297955 28 100.0 33 ............................ TCTGTCCTACGTTAAACTCCATGCCGCGCTTTT 298016 28 100.0 32 ............................ CGCCGTAATCGCCGCGCCTGAGCCATACGCAT 298076 28 100.0 32 ............................ ACGCTGACCAAAATGACCGCTCACTGGAACCT 298136 28 100.0 33 ............................ ATAACTGCATCCCACATATTTTCTCTGAAGATG 298197 28 100.0 32 ............................ AAGAAATGCCAAAAAACAGGGCGGGCGCAGTA 298257 28 89.3 32 ............G.TT............ AATGAGCAACATCGACAAACAGGCGCTACAGG 298317 28 82.1 0 .....................AC.ACT. | ========== ====== ====== ====== ============================ ================================= ================== 12 28 97.6 33 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTCCCGCAAACGCAGCCCGTTTGTCGTTGCCTCGGAGCCTGGCTGGAAGAGGTGAAATCCGGCCTCACAGAATCAATGCGTGATTTTCAGGTGGTGGAATTTGAGGACGAAGCGGAACAGCCGCGACAAAAAGAGTGGTTGCTTGAAGATACAGAAACGAAATGCGACTACTGCCGGGCGTTAAACCATGTGCTGCTGGTGTCGCATTTTGACCGCGATATGTTGCCGCACCTCACGGGGCTACTCCATGACATTACGCATTCAATGGCCGCGGATGTCGTTGCGCCGCCAAGTGCAGAAACGGTAATTCACATTATTTCCTGAGTGCTACCTGAGGCGTCGGGGTGTTCCTCTGACGCCATTGGTTTAAACCCTTTTTTCTGATGCTTACGTAACGTATTGATTTATATAGTGCGAATTTACGTTCCAAAAAAAAGGGTTTTATGCGTAAAAGTTGATTATTTTGTTTGCTAACAATAAGATGGCGTTGTTTCCTTTCA # Right flank : AAAACCAACCCTTTAAAACATTCACCTTACCTATTTAAACCTTAATACCATCAAACCCGCACTCTCTATTTTTCACAATAAATAAAAAATTCATTCACGCACAAATTATATTCTAACCAATATATTATTCGTAAAAATAATGCATTAAATGAAAAAGTAATTTTTCGCTTTATTATCACGGTAATTACTCTTCATTTGATACCCGTCACATTTGTTTTCATCTTATCTCCGATAACATACCGCGCATTCAACACCTTGAAATAAAAGCCCTTGCCATGTCCGTAAACAGCATCACCCCTACAGATTTAAAAACCATCTTGCATTCAAAACGCGCCAACATTTATTACCTGGAGAAATGTCGCATCCAGGTAAATGGTGGACGCGTTGAATATGTCACCCAGGAAGGGAAAGAGTCGTTTTACTGGAATATTCCCATCGCCAATACGACAGCGGTAATGCTGGGAATGGGAACATCCGTTACGCAAATGGCAATGCGGGAG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 308161-310414 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABXOU010000005.1 Enterobacter sp. RHBSTW-01064 RHBSTW-01064_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 308161 28 100.0 32 ............................ CTTCGGTTTCGATTTTTTTCTTCCGGTCATCC 308221 28 100.0 32 ............................ TCGCTTCAGGACGACGCTGGTCCCTTCGTCGG 308281 28 100.0 33 ............................ AGTTAAAAGTACAACAACAGGCGCTTACACAAA 308342 28 100.0 32 ............................ AGATGGTTGGGTGGCTTGCAGTGAGCGGATGC 308402 28 100.0 32 ............................ AATGACGCTCTGCACTTCTAACAGCGTCAATG 308462 28 100.0 32 ............................ GTAAAGAGAGCCACCGCAATTGAGGCTAAACT 308522 28 100.0 32 ............................ AGAGACGAGATCCTATCCGGTCGCCTGTGACT 308582 28 100.0 32 ............................ CTTTGTCTCAGCCCCGTGAATATCGCCTCTGT 308642 28 100.0 32 ............................ TACCCAAAGTGTGACTATAAAAACCACTCTCT 308702 28 100.0 32 ............................ TCCTCCAGTTCGGGTTTTACGTTTTGATGTAT 308762 28 100.0 32 ............................ AAATACAACGGGAATTTTATCTGATGATGATC 308822 28 100.0 32 ............................ GGATGGACGGGTACACTTACGGCTATCGATCC 308882 28 100.0 32 ............................ TGGCTCATAAGCAGCAGTTTAATGAGGCAGTG 308942 28 100.0 33 ............................ CTGCCGCCCGCTTTAAAAATATGCTTCCGGAAG 309003 28 100.0 32 ............................ ACCAGCATTGTTATTTTTGCTGTTGTCGTTTT 309063 28 100.0 32 ............................ TGCAATAGCAGGTTTTTTTATACCCGAACATG 309123 28 100.0 32 ............................ CATTCGAAGAGCCCGACGCGCCGATTTTCAAA 309183 28 100.0 32 ............................ TGCTGCCAAAGGTCGCACACCCTGAGCCGCCA 309243 28 100.0 32 ............................ TTCGCAGTCAACTCAGCAATCTGGTCATTAAG 309303 28 100.0 33 ............................ ATCTGTCAAGATGGCGTATATCTGCGCCGCGGC 309364 28 100.0 32 ............................ TGAAAAAATTCGCTTACGAAATGAGTTCCTCT 309424 28 100.0 32 ............................ ATAACTCTTGGCCAATCCGAGCTTTTCGGCGG 309484 28 100.0 32 ............................ TCCGAGGCATCGTTATCCGCCGGGCGGAATTT 309544 28 100.0 32 ............................ GCCAGCCTGGCGGATCAGCTGATGGGCGGCGA 309604 28 100.0 32 ............................ AGGCGGACATAGCCAAAGGATGGATGGTAGAA 309664 28 100.0 32 ............................ GCTTCTTGTTCAATGATGGTTCCGTTCAGAAC 309724 28 100.0 32 ............................ GGTCCCCTCGTCGCTGCTGGCCATCAGTCTGA 309784 28 100.0 32 ............................ AAACACGATCTCAACAATGTTCTCTCAGTGAT 309844 28 100.0 32 ............................ TGCCGGACATCGTTAATATCGTTCTCAGGGTA 309904 28 100.0 32 ............................ TGCCGGACATCGTTAATATCGTTCTCAGGGTA 309964 28 96.4 32 .............T.............. GTTCAGGGATTCAGCCAGGGCTTCCGAGGCAT 310024 28 100.0 32 ............................ TACTCAACTTATGCGCCCAATGCAATTATCTT 310084 28 96.4 33 ..........T................. TATCTTACAAAAGCCGATTATCGTTGCTGCGTT 310145 28 100.0 32 ............................ CGACCCAAAAAACGGTACTCCCGGAGCGGTTC 310205 28 100.0 32 ............................ GTCACGACCCCGCCAGGCTGCGCAATAGTGTT 310265 28 100.0 32 ............................ GGATAAAGTAAAACCCGCGAGGTGCGGGTTTG 310325 28 85.7 32 ..A..........G...T......A... CTCTGCCATTACGCACTGATGCGAGCGAACTC A [310329] 310386 28 85.7 0 A.C........C...C............ | C [310410] ========== ====== ====== ====== ============================ ================================= ================== 38 28 99.1 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGAAACGGGCCACGCGTTCGCTTTCATCCGGCGTCAGTGTCCGTCCCGCGCTTTTACGGCGGGCCACGTTACGTTCGTTAATCCCGGTGACGCGCAAAATGTCCGCTTTAGACATCGCCGTCCATTCATGAATATTGTCGAGGACGCTGACGGGTAAGCCCTGATTGAGAAATTCAATCAGCCGCATTCCTCTGTTTGCTGGTAATCCGGCGTACCGCCAAAGCGCGTTATCAGCAGGTCTCTGCGCGGGGATCCATGTTCTCATGTTTCCTCCTGAGTAATGTCATTTGTCATGGTTAAGTATAGCCATTTGTCAGAGGGAGGGGAATGAGTGTTTTTCATGCTCGGGGTATGAGAAGAAGGGTTTTCTACCCTAATTTTTAGCGTGTTTATAATACGTTGATTTTAAATGGATATTTTGGAAGGTAAAAAAGAGGGTAAGAGAAGGGTTTTTAGCTTTTTTTGTATGAAAATCATAATGGTGTGGGGATATTATTTCA # Right flank : AATAGAAAATAAGGTCTCATCCCCCTTACTCTCCACACTGTCGAACAGACAGCCCGGAAGCTGAACCGAACCGTCAAATAATTGTTCAAATAATCAACTGCACCACAAAAAAATAAGGCCGGGAAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTTAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTTTCAGCG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //