Array 1 15417-19740 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAZUD010000020.1 Acidithiobacillus ferrivorans strain ACH Contig20, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 15417 37 100.0 35 ..................................... GATTTGGAAGATTTGTACATCATATAAGCATCAGC 15489 37 100.0 34 ..................................... GCCGAGTCCTTTGCCGAGATACAGGGCGGCACCG 15560 37 100.0 36 ..................................... CAGGTTGGTGTAGCACCCCCAGAAGTGCAAACATAA 15633 37 100.0 34 ..................................... CGATCACCGGAAGCGCAACCCCATCTCCGCTGAT 15704 37 100.0 35 ..................................... CAGGAGAAAACCAGAGGGGTAGATCAGAATCGGCA 15776 37 100.0 35 ..................................... TGGTCAATGGTGGGAGTTACCTGCTGGATCATCAT 15848 37 100.0 34 ..................................... CCACCAGGAAGACGATATCCGCGTGGCAGATGGT 15919 37 100.0 34 ..................................... CTTACGATGGCGTCATGCGCAACCTGGTATTCAA 15990 37 100.0 34 ..................................... TTTTTGATCTGGTCGGTGACGTTGACGTTGTACT 16061 37 100.0 34 ..................................... GTGGCTGGGGTAATCGGGGCGCTCAGGGATGGGT 16132 37 100.0 35 ..................................... AATTTAGCAGCGCCGGGGAACTGCGCCACGAAGTC 16204 37 100.0 34 ..................................... GTACCGGGCGTTGATGAGGTCAAACAGCGTCACC 16275 37 100.0 34 ..................................... CATGCGCGTGTTTGGCTTGCCGCTGTCGGCAATC 16346 37 100.0 34 ..................................... GTGTTCTTATGGGCTCTTTTGGATGAAAGAGAGA 16417 37 100.0 34 ..................................... GTGCTCAGGGCGTCCGTCATACCCGCTTTGGTGG 16488 37 100.0 35 ..................................... CACCTGGCGCGTGAGGACATCATAAAGAACATCGC 16560 37 100.0 34 ..................................... ACGGATCAGGGTGTTACGGTTGGCTTCTATGTGC 16631 37 100.0 35 ..................................... CGGTTTGGACGCCACCATGATCGTGGTTTATAACC 16703 37 100.0 35 ..................................... GTGCTCCTCTCCGCCGTCGATGGTGTAAGAAATGC 16775 37 100.0 36 ..................................... AGGCCTTCAAGACGGGCGTCGGCGTGATTCGCATGA 16848 37 100.0 34 ..................................... TCACGTCGTGGGAAAGTATGGCGGACTCGGCAGC 16919 37 100.0 34 ..................................... GACTAAAGCCACATGGTTGAATACCAGGTTGCGC 16990 37 100.0 36 ..................................... CTGTTATCCAGCGTCAAGCGGTGAATGTGATCGACC 17063 37 100.0 33 ..................................... CCGCAATCCATGCCCGCCTGGCGTTTCTTGAGA 17133 37 100.0 35 ..................................... ATCTGAGCGGTACATCCCCATGCTCAGAGGCCCGA 17205 37 100.0 34 ..................................... TCAATCCCACCTGGCGCGACTGCTCAAGGTGTAC 17276 37 100.0 37 ..................................... AAGTCGGCTGACAACGAGGTCAACGTGGGATTCGACG 17350 37 100.0 34 ..................................... AGTTCACCCTCTCCGAAGCCGCCGCGCTGGTGAA 17421 37 100.0 34 ..................................... TCTACGGGATAGTCAGACACATGGTACGGATCGT 17492 37 100.0 35 ..................................... TGACAGCGTTCCCCAGCCTGGCGAGGAAGTATTTT 17564 37 100.0 34 ..................................... AGATTACCCTGCGACGTTTGGGGATTGACAGCCA 17635 37 100.0 34 ..................................... CAGGTATCGTCATTCGTTGTGCCGATGAACACGC 17706 37 100.0 35 ..................................... CTGATACTCCGGCGTATCGACCGCTTCAATAGCCG 17778 37 100.0 34 ..................................... GTAAGGCTCAAGTGATCCGGTAAAGCCCAGGCCA 17849 37 100.0 34 ..................................... AAAGAGCTCACAGCGCGTCATTTCGCCACCTCAT 17920 37 100.0 35 ..................................... AATACGCGGATCGGTTCAACGGCTTTGAAGATGGT 17992 37 100.0 35 ..................................... TCCCAGTAATATCATCCATTCGTCGTTATCCTTTT 18064 37 100.0 34 ..................................... AGATCACTGGTACGATTTATCTCGGTGAAAAGAT 18135 37 100.0 35 ..................................... TCCAACGCTACGAATCCATAAAAAACGCGCAAAAA 18207 37 100.0 34 ..................................... ATTTTAGGATTGTATGTTTTGCAGTACGACTTTA 18278 37 100.0 35 ..................................... TTGTAGCTCCGACCGGGAGCGGTAAGACCGTAATC 18350 37 100.0 33 ..................................... GTCGGATAGCTTCTGGGTGAGCGACTCGATCAC 18420 37 100.0 35 ..................................... CGAACGATGCGCGCGCGACCGACCGACCGTGGAAA 18492 37 100.0 34 ..................................... ATCATAAGGGTGTCTGGCCCCTGGTTGAGGGTCG 18563 37 100.0 34 ..................................... ACGTATGGGGACGACGACAACGGCTGGCAGTGGC 18634 37 100.0 34 ..................................... TCGTAATGCTTCGGGCAAAGCTGCTCGACCATCT 18705 37 100.0 33 ..................................... TGCCAGATCCACAGCGGGTGCGGGAACTCATGG 18775 37 100.0 34 ..................................... AACCATCCCGATGTGGGCCTGCTGAACACCGAGG 18846 37 100.0 34 ..................................... AGCATGACGAACACGGGACAGGTAGCCTACACCT 18917 37 100.0 35 ..................................... TCCGACGCGGCAACGCTCATCGCCGCCGGGTTCAC 18989 37 100.0 36 ..................................... TTCCTGACTGCGGTCGGTACTGTAATGCAGGCTGCC 19062 37 100.0 34 ..................................... ACGTAGTTTGTGACGCCAACCCCGACGACATAAA 19133 37 100.0 34 ..................................... CTCCACGCTTCTCGCGACGCCTGCAAGGCAGCCG 19204 37 100.0 35 ..................................... TGGTCAATCGGGTGCGACTGGACTCCGGTTCTCGG 19276 37 100.0 34 ..................................... TTGTCTTCGGCAGCCATCAGCCGAACACCGCGAC 19347 37 100.0 34 ..................................... TCTCTCAGTGCCGCAATGGCGGAATCGTGATCGT 19418 37 100.0 34 ..................................... TGCTGCCATACGTAAGGGCTGGCGGCGATAGCGC 19489 37 100.0 34 ..................................... GTGGATGGCTTCCACCACGCGAACCACTTATGCC 19560 37 100.0 35 ..................................... CTCGACGAATCTCTGCCTGCTGGTGTCCTCGACAG 19632 37 100.0 35 ..................................... CAGCTTACGCAAGGGAGCGCTACCAATACGCTGAC 19704 37 97.3 0 ................G.................... | ========== ====== ====== ====== ===================================== ===================================== ================== 61 37 100.0 34 GTATCGCCCGGCTTATAAACCGGGCGTGGATTGAAAC # Left flank : GCCATACCTGAGCCGTTGAGGAGGCGTAATCATGCTTATCATCGTCACTTACGATGTCTCCACAGAAACGGCGGCGGGGCGCAAGCGCCTGCGCCGTGTGGCCAAGGCCTGCGAACGGGTTGGCCAGCGTGTGCAGAAATCTGTTTTTGAATGTCAGGTCAATCAAATGCAGTACGAGACTTTTGAGCGCACCCTGCTGGCGGAAATAGACGAAAAAGAGGATAATCTACGCTTCTATCGTCTCACAGAACCCACCGAACTGCGTATCAAGCAATATGGAACCTTCCGATCTATCGACTTTAATGGTCCCCTCATGGTTTGATGCGCGAACCCCGATTGGCGTCTCAAAGCCGGTCCTTTCGCGCGCCGCGTATCTTATTGTTATATCATCGTTTTTATTAGAAATCCTTGGGGTCTGTATAGGTTTTCAGGTGGCCCTGTCTGCCATTCGCGGCATGCGCAAAGAAAATTGTTCATTAACAATGTGTTGCAACAATGCA # Right flank : CAGGATGGAACTGTATCTGACCTGCATTTAATCGAGGTAGACATCGACATCGTGCTCGCGGCGGTCATCCATGAGCGGAATCCTGTCTTGCGGCAATTCAGTGTCATCCAGGGTAATGCGCACTACCCGCGCTGATGCGGTGCTATCAGCATGGACGGTGATATGGTACAGCGTGTCGCGGTAGCGGTAGTGGACCTTGTAGAATTTCCAGTCCGCCGGGACGCAGGGCGTGATGCGCAGGTGATCAACTTCAAGCGACAGGCCCAGCAAGGTTTCGATCGTTAATCGATACATCCAGCCCGCTGCGCCGGTGTACCAAGTCCAGCCACCACGACCAACGTGCGGTGCGGTGCCATAAATGTCGGCGCAGATAACGTAGGGTTCCACTTTATAGCGGGCGATAGACTCTGCGCTACTTCCATGGTGGACCGGGTTGAGCATGTTGAATAATTCCCAGGCCCGCACTTTGTCACCCAGCTGGGCAAAAGCCATGGTGGTCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATCGCCCGGCTTATAAACCGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.70,-14.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA //