Array 1 1273716-1271354 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134476.1 Trueperella bialowiezensis strain NCTC13354 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================================================================================= ================== 1273715 28 100.0 33 ............................ CCGTGGAAGTGACGTGCCCAATCGTGGTGACCA 1273654 28 100.0 33 ............................ CCGTGGAAGTGACGTGCCCAATCGTGGTGACCA 1273593 28 100.0 33 ............................ CGAGACAAGGCGTTAGCCCGGCTACGAGAGCCA 1273532 28 100.0 33 ............................ CGTTCATGCCGTTAGGCTATACCATCTGGCATA 1273471 28 100.0 33 ............................ CATGTGATAGAGAGAGGCTAACGTGGGAGGTAA 1273410 28 100.0 33 ............................ CAGCGGGTAGGCCAGCGTCATCGGATCGCGGGC 1273349 28 100.0 33 ............................ CGTGTTTCGGCTGCCGATGCCGCAGTCTCTCAT 1273288 28 100.0 33 ............................ CGTCTGGCCGACATCGCCCTCACTGAGAATCTG 1273227 28 100.0 33 ............................ CAGTTTCTCGTTCGACTGCTCAAGCTGGTCACG 1273166 28 100.0 33 ............................ GACAGGCTGAAGCCTCTGGTGATCTGGAAGATA 1273105 28 100.0 33 ............................ CAGTTTGGACAAAGATTCCAACGCACCCGTTTC 1273044 28 100.0 33 ............................ CGCCTCCCGCAATGACTCTGAGACCGGGGAAAA 1272983 28 100.0 33 ............................ CTGTACTGATTTCGTGTTTTGGCGGGTTAACCG 1272922 28 100.0 33 ............................ CATCGTGATAGCCACATCAGACACGGGCAGGCC 1272861 28 100.0 33 ............................ CCGGTGCGTGCAGCGGAAAATTTTCGCTGACGA 1272800 28 100.0 33 ............................ CCAATGTCGCTAGGCTACTTTACGAAAATCGCT 1272739 28 100.0 33 ............................ CGTCACCGTCTTCGGCACGTGAATAGAAGCCCA 1272678 28 100.0 33 ............................ CAGTTCTGATACTTGTTCAACGTCAGCCGCCCC 1272617 28 100.0 33 ............................ CTCGTGCGGCATGAAATCATCGCCCAGATTATG 1272556 28 100.0 34 ............................ CGGTGGTTCGTTGTCGAAAGCGGACTGCTGGTAG 1272494 28 100.0 33 ............................ CCGTCTGGCCGTCGAGGCAAGCGGAAAACGTAT 1272433 28 100.0 33 ............................ CGGTCGGACTCGTAGGCTGTCCGGAACGAGGCA 1272372 28 100.0 33 ............................ CAATTACAGTACGCTAACGGCGTCGCAGTCATG 1272311 28 100.0 33 ............................ CTTGCCGGCCCAATCCAAGCCGCTCTGCCTTTA 1272250 28 96.4 33 .........T.................. CTGAGCACAGAACTATACCCAAGTGAACTATAT 1272189 28 100.0 33 ............................ CCGGCGCACCCTCTACGGCGAGAAAGACAAGCC 1272128 28 96.4 33 .........T.................. CTCCACGAAAAAGCACAGGTGACCAAGCTATGA 1272067 28 100.0 33 ............................ CATCGTGGCATGGACGATAAGAAACCGGTCCGC 1272006 28 100.0 33 ............................ CATCGTGGCATGGACGATAAGAAACCGGTCCGC 1271945 28 100.0 33 ............................ TTCCTTTTCAGAAAGTGGAATCGCCTGCGTCAG 1271884 28 100.0 33 ............................ TGAGTATGCGGCCGCGTATTGTCAGTCGCTATT 1271823 28 100.0 34 ............................ CACGCGCTTAGCGTTTTCTGCCAGCTCATCTTCA 1271761 28 100.0 33 ............................ CGTGACTGCGGTGACGTGCTCGTGGTCGTCTTC 1271700 28 100.0 33 ............................ GGGGTTTGGGCGGGAGCCCATGCACGCCCCGCA 1271639 28 100.0 33 ............................ CTGGCGTACGCCCGGCGCGTTGTCATGCGTAAC 1271578 28 100.0 33 ............................ CCCGCGTTAGAAGCGATGAAGACCGCGATAGAG 1271517 27 92.9 109 ....................-..A.... TGTGGTACTCTTGTCAGTGATGAGCTTCCACTCTGGGTCGCCTGCAATAATGGATCGACAAAACCCGGACTAAGAAGCTCATCTACTACTTCACGACAATTTCAACTAA 1271381 28 89.3 0 ......................CA.T.. | ========== ====== ====== ====== ============================ ============================================================================================================= ================== 38 28 99.3 35 GTGCTCCCCGCGCTGGCGGGGATGAGCC # Left flank : GTCCTTCAGCTCACTGCAGTTCCCGCCGGTCTTCGTGGCGATCTTACGAAGTGGCTGATGGAGATTGCACCCGGCGTCTTTGTCGGAAATCCGAGTGCTCGTATCCGGGAACTGGTGTGGGAAAGAACTGTGGAACTGTGCAAAGACGGACGAGCGATTATGGTCTGTTCCGCCGATACCGAGCAGGGGATGACGTTCCGGACCCACCGTCATGCGTGGGTTCCTACAGATTTTGACGGTTTAACTCTGATGATGCGCCCGGATAATTCGTCTAAGTCCAAAGCAACAGAAAGACGCACCGGGTGGTCTACCGCTCGGCATGCTCGGAAGAAGCGGAGGTAAACGGGAAAATGTTCCTATGTGCAAAGCGAGTTTAAGACACGACGACGGCCTCCCGACCGTTTTCTGTGCGCCGTCGACTAAGGCTGGCGATGGACGACTAAGCTAAGAAGTCGTATGTAAACTGGCTCAATCATTCGAATCTCTGCTGGTCAGCAAGA # Right flank : CCCGGCGCCCTCGCTACGCGCGATACCGCTTATACGCCCTGAGCAGCCTGAGCGAGGCCTCCGGCTCGGCCACCGTCACGCGCACGCCCTCATCCACAAACGTGCGCACCACAATCTTCTCCTCGGCGCAGAAGCGCGCGAAACGCGCCGAGTCCTCCCCCAGGTCAAACCACACGTAGTTCGCCTGTGGCTCCGGCCCGTCCCAGCCAAGCGCGCGCAGCGCCCCCACAAGCTTCCCCCGCTCGGCCACCACGGCCGCCACCCGCTTATCCACCTCCGGACGCGACTGCAACGCCGCCACAGCCGCCGCCTGCGCCAACACGTTGACCCCAAACGGCGTCGCAACCTTATCCAAACCGGCAACCACGCCGGCGTCGGCGATCGCGTACCCCACGCGAATCCCCGCCAAACCGTACGCCTTCGAAAACGTCCGCAACACGACGACGTTCCCAAACTCGCGAGCCAACTCCACGCCCCGCACGGGGTCGTCCATCTCAACG # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.16, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCTGGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCTCGCGGGGATGAGCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.70,-13.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //