Array 1 2644770-2634317 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN890655.1 Candidatus Promineofilum breve strain Cfx-K chromosome I, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 2644769 37 100.0 37 ..................................... TGCAGAATCTGCAGGGCCTCAACGTTGTTCCTCGCTG 2644695 37 100.0 36 ..................................... ATTGGAGTTGGTCGACGCTGCGCCAATCGCGGTGGT 2644622 37 100.0 36 ..................................... GTTCCAGGATGGTCAACTCGGACCGCATCAGATTCT 2644549 37 100.0 37 ..................................... CGCTCACTCTTGGCTTTTCGCGAACGGTTATCAACTC 2644475 37 100.0 36 ..................................... AGACCGTCGAGCCGGTGCTGACCCGGCTCGGACTGA 2644402 37 100.0 36 ..................................... CGATGACGGCCAACTGTTCGCTCGCGGCGTTGGCCT 2644329 37 100.0 35 ..................................... CAGCGCGATACATGGCGGCGATGCCGTCGCGCTCA 2644257 37 100.0 36 ..................................... AAAAAGCGAACGAGATCGGCGACTTACTCATGGACT 2644184 37 100.0 35 ..................................... AAACCACCGATTCTCATCATCCATTCCGAGATAGA 2644112 37 100.0 38 ..................................... AGGAAGTCGCCGACGAAATAGTCGCGCAAGGCTTGCGC 2644037 37 100.0 37 ..................................... ATCGAAGAGCGCAAAGCCGAAATCGTGGCCCGGTTGC 2643963 37 100.0 37 ..................................... CGCCGGGGGCGTCGTACCCGGCAAGGAGAACACCATG 2643889 37 100.0 37 ..................................... GATACGTGGAAATCGACCGCCGCGGCGAACAGGTCAG 2643815 37 100.0 36 ..................................... GCCGCGGGTTACGCAGCGTCCTAAAGGCGGCGGCGA 2643742 37 100.0 38 ..................................... CCAAAAGTCTCGGCTCGTCGACGACAATCCGGGACGGC 2643667 37 100.0 35 ..................................... GGAGTCCTTGAGACCGGCGGCGGGGGGCAGGGGAA 2643595 37 100.0 36 ..................................... CTCATTGGCCGCGTCGTAGATGGCCGAGGACACGAC 2643522 37 100.0 36 ..................................... AGCAGGCTCATGCGACCGATGAGACCGGCGTCCTGG 2643449 37 100.0 36 ..................................... AGGGAGAACAGTTGCAGATAGCCGGACGTGTCGGTC 2643376 37 100.0 38 ..................................... TTTTATCGTAACGAATAGCCACGTTATCCGGGAAGGAA 2643301 37 100.0 36 ..................................... TGGACTTTCATGTGATTCATGGCAGCCGATTCGTTA 2643228 37 100.0 37 ..................................... GCGTGGTCGGCGCGGGCGGTAGCACACTCAATCCATC 2643154 37 100.0 36 ..................................... AGTTCCAGAAAGGCGTCGCCGTCTCGCGCCGTGGCG 2643081 37 100.0 37 ..................................... CCAATCTCCTCCAGTCGCCCGGCGCGCCGCATCTCGT 2643007 37 100.0 36 ..................................... GCGTGGTCGGCGCGGGCGGTAGCACACTCAATCCAT 2642934 37 100.0 35 ..................................... GGCTTGGCGCAAAGAAGGGGTCGGGTTTCCCGGTG 2642862 37 100.0 36 ..................................... ACGGCGGCAAAATCAGCATCACCGATCCGAACCTTC 2642789 37 100.0 36 ..................................... TTGCGCGATCGAATTCAACATCGTGTGCGGCGTGGT 2642716 37 100.0 37 ..................................... GGTCGGCCTACACGGGGGCGGCGGATCGGGTGGCATG 2642642 37 100.0 37 ..................................... GGCCGATATTTCGTATGAATACCACTCGGAGGAAGAG 2642568 37 100.0 36 ..................................... GTCGTCGTATAGCGGCATCGGCCGCTTACACGAGGG 2642495 37 100.0 36 ..................................... TTGTACATGATGTAGAAATGGACGAATGGGCGCTTG 2642422 37 100.0 39 ..................................... ACCGGGTGACGGGGCGCAACCGGGTATTCAGTCAGGCAA 2642346 37 100.0 39 ..................................... GTTCGCGCCGGAGTACGTGCAGACCGACGGCACGGTGTG 2642270 37 100.0 36 ..................................... GATGTCGATTATGAAACCGGCGAACCTTTCCGGCGC 2642197 37 100.0 38 ..................................... AAGCGTGGTGTTGCGGGTCGCGTTCGGCTAGGTGTAAT 2642122 37 100.0 37 ..................................... TAGACCTACTATTCACCCTGCGCAAAATCGAAGCACT 2642048 37 100.0 37 ..................................... ACAACTATGATACGAGCCTCGACGCGGCGACGGTGGC 2641974 37 100.0 36 ..................................... ATGACCGGGCCACGCTTGACGCCCTGACGGCCGGTG 2641901 37 100.0 36 ..................................... TGGTACATCCCCTCCCATACCAGCGGCGGCGTCGTG 2641828 37 100.0 35 ..................................... TTGCAGGTCGCCAAATATCTCGCCTGTGTCCAGAC 2641756 37 100.0 36 ..................................... GGCAGATGCTTTCAGGGATTATGAAGAGGCAAAGGC 2641683 37 100.0 37 ..................................... CGCGCGTCGTCATCGACAACCGGCGTCAACTGGCAAT 2641609 37 100.0 37 ..................................... TTGTCCCAGCGCCGCCGCCGGTCAATCATATCCCGTT 2641535 37 100.0 38 ..................................... CGAAGCCATGATACACCGCCCGACCCTGTGCTCGCTTG 2641460 37 100.0 36 ..................................... TGTTCAATTGCTTTTCGCAATAGAGCCGGGTTGCCC 2641387 37 100.0 37 ..................................... CCACGGCCAATATACCCCCTGTCACTTACGAGGATTG 2641313 37 100.0 35 ..................................... GGTCGGTTCTGACACACAGGAGCAAGAGATGTATT 2641241 37 100.0 36 ..................................... GAAGTCAGCGCCGTCGAAACCCGCACGCCGGTCGAT 2641168 37 100.0 36 ..................................... TGGGTCTGACTATCTCCGACATGGCCCGCACCGTTG 2641095 37 100.0 37 ..................................... CCGTCGGAGCGGCGTCTACCGTTGTTGTCTCAATTGT 2641021 37 100.0 36 ..................................... TGGCGGTCGTGGGGCTGGTGATTGCGATTGTCGTGC 2640948 37 100.0 36 ..................................... ACGAACTATTGGCCGTTGGGCGGCGCGGCGGCGACT 2640875 37 100.0 35 ..................................... ATAATCTCGTCCGTATTCAGGTCGTGGACAATGCC 2640803 37 100.0 37 ..................................... TGTCTTACTCCTCGGCCGGCGCGTCATCCGCCGGCGC 2640729 37 100.0 37 ..................................... ATGGGTTCGATGGCGTCAACGCCTCATTCGAGGTACG 2640655 37 100.0 36 ..................................... CTCGTTGATTGCTACCACAAACCATCCCGGCTGAGC 2640582 37 100.0 36 ..................................... GTCGGTGAGCGCTTATGGGACGGGCGGCTCGATTAC 2640509 37 100.0 38 ..................................... ATGGTGGGGGTGCCTTTCTCTTCGTTGTCGTCGCTGAA 2640434 37 100.0 38 ..................................... ACGGGGAGGAAGGCGCGCCATAGAACTCCAGAAGCTGT 2640359 37 100.0 37 ..................................... CTCAAAAGAACTGCTCCCATCCCCCGCAAACTTAATA 2640285 37 100.0 37 ..................................... CTGAAGATGTTGCATGGTGGCTTGACCGGTTGGAAGG 2640211 37 100.0 36 ..................................... TTTATCAGGCGAATACGCTGGGGCGGGGGCTGACGA 2640138 37 100.0 38 ..................................... CCAGGAACTGGCCGTCCTGACGCCACAGGCGCGGCAGG 2640063 37 100.0 36 ..................................... TCCATGTGGATGCTCTCCGCGAACTTCCCCGTCCGC 2639990 37 100.0 38 ..................................... GAACGTGATCGGTGAGTTCCTTGCCCGTGATCGCGGTT 2639915 37 100.0 36 ..................................... TGCCGTCCTGCCGTCCTGCCCTGTCCTGCCTGCCCT 2639842 37 100.0 35 ..................................... AGGGAGATGATGTCGGTCGCCGACGCCACGATCTG 2639770 37 100.0 35 ..................................... CCTCGATATTTGCAATTGCTCTGCGTCTCGCATAT 2639698 37 100.0 35 ..................................... ATGGGGGTGGAGCGGTTGTTGTGGCCGTTCAGGGT 2639626 37 100.0 37 ..................................... TCGTATCCGCGAACGCCAGCACCAGGTGCGTATGCGT 2639552 37 100.0 37 ..................................... GCGCCGTTTCCTGCTCCATGATAGCCACCTGGGTGAC 2639478 37 100.0 37 ..................................... GATCCGTATTCTTATCCAGAAGAGAAGAATGATGACT 2639404 37 100.0 35 ..................................... AGGACACGGGGGAGGGTGACATACGACCAGGGGGG 2639332 37 100.0 36 ..................................... CAGTGGCAGGAAATCACGGCGGAGGCTGTGGAGCAG 2639259 37 100.0 35 ..................................... GCGGCTGCCGCTGGTGACGAACGCGGGGAATGCGG 2639187 37 100.0 35 ..................................... ACAATCGCCGTCCACACCCCCGTCAAGAACGTACT 2639115 37 100.0 36 ..................................... TTGGCCGCCAGCGCCTTCCAGCGCTTGACCTCTTCC 2639042 37 100.0 37 ..................................... AACGCTCCAGACTGCGCGTCCGCGACAGCAGGTTGCT 2638968 37 100.0 35 ..................................... GCCTCAATCTTGCCCCCCTGGGCGCGGTTAGCCAC 2638896 37 100.0 37 ..................................... AACTGGCGGCCATTTCTGCCTATCTGGACACGGAGAT 2638822 37 100.0 37 ..................................... ACGTGCAACCCCAGCGCGGACGACCACAGGCCCATCA 2638748 37 100.0 35 ..................................... AGAACGGCGACTCGTATGACGTGCTCGCGCTGGAG 2638676 37 100.0 37 ..................................... TCGGGCTGGCGATTCTGGACAATTGACGTGACCCTGG 2638602 37 100.0 36 ..................................... ACGAGGACAACGCCAACCGGGGGCAGTGGGTGGTGG 2638529 37 100.0 37 ..................................... GCTGGACTGGGTTTCTTCTGGGTTTCCACTGAGTTTC 2638455 37 100.0 36 ..................................... AGTCCATCGTGCCCCGGCCGCAGGCCGGGCACAGCT 2638382 37 100.0 36 ..................................... GAAGTGCCGATTGGCGTCGTCTGATTGACGCCGGTC 2638309 37 100.0 36 ..................................... AGGTGTAGAGACTGTCGATGATCTCCCGGAATCGCT 2638236 37 100.0 40 ..................................... CGGTCATAGAGAAGGCTGACGAAGAACAGGAGGAGGTAAG 2638159 37 100.0 35 ..................................... CAACTCAGCATAGGTGCTGGCGTTGGCGGTTTGGT 2638087 37 100.0 36 ..................................... GTTGTCAGGTTTATAATCGTCGCCTGAAGCCGGTAG 2638014 37 100.0 36 ..................................... GGGCCAGAGCGCTGGTTGAGTATTTGAAGGACAGAG 2637941 37 100.0 37 ..................................... AGAGTACGCGCTGGGACAAGGTGGTTACGCCGGCGAT 2637867 37 100.0 37 ..................................... GAGGAGGCTGCGAACGCCATCGTGGGGATGCGTCACA 2637793 37 100.0 36 ..................................... ACCACCAGCGCCGCAAACTGCCACGTCGTCGTGCTC 2637720 37 100.0 35 ..................................... AGGCGTTTGCGACAGCGGTGACGGGGATCGTGCAG 2637648 37 100.0 36 ..................................... AGGTCGCCGGGGTATCCCCAGTCGCGGCTGCCGCTT 2637575 37 100.0 35 ..................................... ATCTCGCATAGCTCAGCCAGCGACAGGGGCGGGTA 2637503 37 100.0 36 ..................................... CTAAAGCGGGTATCCGCAGGTAATCAAGGCGTTAGC 2637430 37 100.0 36 ..................................... CAACGATGAGCCGACCGACGACGAGCGCCACGACCG 2637357 37 100.0 36 ..................................... CCACGGCAGGGGGTAGGGCGGCGATAGCACGGCCGG 2637284 37 100.0 37 ..................................... GACACGTAGTTGCGGTTGCCGCTCTCGTGAATCGGCT 2637210 37 100.0 37 ..................................... ACGTCAATATCAAACTCGCCAGTGGTCGATTTAACCC 2637136 37 100.0 37 ..................................... GCCGCTTTCAGTAGCAGCGCCGTCTCTTTAGCCGCGC 2637062 37 100.0 35 ..................................... ACGAGGCGGCCTCGCTGATTGTGGGCGAAGACCAG 2636990 37 100.0 38 ..................................... TGGCGGCGCTGTGCCGTTTTCTGGGCTGTCAGCCGGGC 2636915 37 100.0 36 ..................................... TACTCCGACATCCTGCCTGTCGCCTCGTATCTCATC 2636842 37 100.0 36 ..................................... CTTCGGGCGTGCAGCCATCGGCGCACATGCGCGGCC 2636769 37 100.0 37 ..................................... CGACGTACAGCGTCGCCGTGTTGCCCACCGCCGGTAT 2636695 37 100.0 36 ..................................... GTAAACGACATAACCTCAATCGCCGACGCGATAGCC 2636622 37 100.0 36 ..................................... CTCCGGGTGACAATGAAGTGCAACCCGGCGGCAAGC 2636549 37 100.0 36 ..................................... CCGTTCTGCAAAAACGAACGGGCGAACATGTGGCGA 2636476 37 100.0 35 ..................................... ATTCGATGAACGGCTATATCAGCCAATTCGATGAG 2636404 37 100.0 35 ..................................... CTCCTCTAGCAACCAGCTAAACATCCGCCTGAGCG 2636332 37 100.0 36 ..................................... GCGCAAAAGGGGCAATCTGACAAGAGGTGTATGTGT 2636259 37 100.0 35 ..................................... GCGACGGTAGCAAGATGGGCGTCGGCTTGCCTGAG 2636187 37 100.0 36 ..................................... TCTGCCGCGCTTCCTTTTCCTGATTCAAGACCGATT 2636114 37 100.0 35 ..................................... TTCACTACGTCCGTTTTCGCTGGGCGAAGAAGATA 2636042 37 100.0 36 ..................................... GGTGTCTCCTCCTGCGCCCGGCGGGCGTTCTTTCGT 2635969 37 100.0 36 ..................................... TTGATAAGAAACTCCGTGACCCCGGAGTTCTGCACC 2635896 37 100.0 36 ..................................... CGCCCAGCGCGAAGCCCTCAGCCTCCGCCGTCCATT 2635823 37 97.3 36 ............C........................ TACCTAGGCATTGCCTACTATCGCCGCATTGCCGAG 2635750 37 100.0 39 ..................................... AAATACTTGACCAGGGAGACGACACCACCCCGCAGCCAG 2635674 37 100.0 38 ..................................... GGTGATGGTAGAAGTCAACCCAACTGCCGCCAGAGCAG 2635599 37 100.0 36 ..................................... TTAAATTGATCACGCTCCAGATCGGATACAATCACC 2635526 37 100.0 36 ..................................... ACGCGCGGCCAGGCGCTGGATAAAGGCGGCGAAATC 2635453 37 100.0 36 ..................................... CTGGGCCGGGTCTTCCGTGATGGTGTAGGGGTTGCG 2635380 37 100.0 37 ..................................... GTAAATAGTCCCTTTCTCCTTCTGTAGCCTCAAGCGC 2635306 37 100.0 38 ..................................... CGATCTCACCATCCGCGCCAACGACGTCGACGACGCCG 2635231 37 100.0 35 ..................................... ACGGGTTGCCGCTCATCTATGCCAGTAGCCGCGAG 2635159 37 100.0 36 ..................................... ACTCTACGGGACGGGCGAAGGCGATGTAGCTGCCGT 2635086 37 100.0 36 ..................................... ATCATCAGTGTCGTATTCCCCTGCCGGTAGTAAGTC 2635013 37 100.0 36 ..................................... GCAGTTGGTCGAGCATGGCGCGGCCGATGCCCTGCC 2634940 37 100.0 36 ..................................... ACGAACTGCCGCCGCAGTATGAGCGCAACGCCAAGT 2634867 37 100.0 36 ..................................... GTAATAGGCCACCTCCGCCGGGGTCAGGTCATCTAT 2634794 37 100.0 37 ..................................... ACTGCCCCGTGCGTGACGGAACTCTCCCCTCCGGCCG 2634720 37 100.0 36 ..................................... TCAATCGTGGCCATCATCCAGGAAGTGATCGACCGC 2634647 37 100.0 38 ..................................... GCCGGGTTAGCTCCTCCCACCGGCGGGCGGTTTTAATT 2634572 37 100.0 35 ..................................... ACAAGGTCAACAATCACCCAACGGCCGTCTCTCTG 2634500 37 100.0 36 ..................................... ATCTACCGGGCCGACGGCGCGGCCGTTGTCGGCCGC 2634427 37 100.0 37 ..................................... TCAGTAACCCCATAGCCGGCGACGGCTTTAATTTGTA 2634353 37 97.3 0 ...A................................. | ========== ====== ====== ====== ===================================== ======================================== ================== 143 37 100.0 36 GCTGCACAGCCTTCGACCCGATAGAGGGTACTGAAAC # Left flank : CCGACAAAATCGGCGATCATTTCAAGCTGCAACTGCTGGCCTATGGCCGGTTGCTGGAGGAAGCAGGCGGGCGGCCGGCCAAGATGGTCAGGCGCGGTTTTCTCTATCTCATCCCGTTGCGCAAGGCGACGGAAGTGGCGTTCACGCCGCGCCTGCGGGGCGAACTGGCGGCGGCGCTGGGCGACATCCAGCTCATGGCCGGGCGACAGCGCATGCCCCAACCCACCGACCGGCAACGCCGCTGCATCGACTGCGAGTTCAGGCGCTTCTGCAACGATGTCGGCTAAGGTAGCCGCCCCTATCGGAGATGGTTATGCCCAGGAAATGGGCCTTCGCAAATGACCGGCAATTTGAGACAAAAGTAAGTTTGCGAAAATCGACGAGGGACGAACAAAAATGATGCCCCCGGCCACCAAAACAGACCCACCAGGATGCCCCAGGAACCACGGAATCAATCCCACATGGCAAATGTGCCGGATTTGCGCTATAAACCATAAGCG # Right flank : CGAATCAGCCAGGCGCGCACGGTGGAACTGCTGGGCGCTGCATAGCTGTCAACCCGACAGAGCGGTCACCCCATTCAACAACCATCAACCCATCGAGACCAGATCGGTCGTCTAGCCCCCATCCTTGATAAACCGCACCCGGCTAACCCCTTCGATCAGGCTCAGGGCCAATTGCGCCGAGGTAAAGCTGGTATAGCCTAAACCCATCGCTTGCAATCCCGCAGCCAGGGCGACGGGTTGAATGACCCGTGTGCCCCCATCCATCAATGGATTGTCGCCGGTCAGAGTGAGACAGGCGGCACTTTCTTGCCCATCGGCTTGCAGGGGATACTTGATGATTCGTAAGCTGGCATCGTCTGCCTCATCGAGGTAAAAGCCTGAGTGAATGGTCTGGGGCGTTTCGTGAATATCCAGCACGTTCACTTCCCCCTGGAACAAGCCCAGCAAGACGTTGTCGGACAAGCGCTCCAGACGCAAGCAGGCCAGTTCACTGTTGCCGG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGCACAGCCTTCGACCCGATAGAGGGTACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.80,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA // Array 2 3485761-3487940 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN890655.1 Candidatus Promineofilum breve strain Cfx-K chromosome I, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 3485761 37 100.0 37 ..................................... ACATGGTATGCCTCCCACTACTAAGATCTTGAAGAGT 3485835 37 100.0 38 ..................................... CTAACAACAGCCCACACTCTGTCTGCCACGACATCGAT 3485910 37 100.0 37 ..................................... TGAATGAATTGGTACGCCAGAAAGAATTCATTGGCCG 3485984 37 100.0 38 ..................................... CAAACCACTCCCGTGCCATGGTGCGCAGGAAAGCCCAA 3486059 37 100.0 38 ..................................... GTACACACGGGGCATAGCTTGGGCGCATTTTTGACGGT 3486134 37 100.0 38 ..................................... GTAACGGTAAGCGACGTAGATGATCCCGGCGATGCCGA 3486209 37 100.0 39 ..................................... TGCTAGCAGCAGCACTAAAACTCCAATCCAAATGTATTC 3486285 37 100.0 35 ..................................... CGGCGGCCCGAATCGTACGTATACGCTCTTTCAAA 3486357 37 100.0 38 ..................................... CTCGACCACTGTTGCGGTTGGGGTCGCCGTTGGGCAAT 3486432 37 100.0 38 ..................................... CAAACCACTCCCGTGCCATGGTGCGCAGGAAAGCCCAA 3486507 37 97.3 37 ............................T........ GTATGGATGGCCGTGTCGGTGTAGGCATAGGCGATGC 3486581 37 100.0 37 ..................................... TTTCCACCCGCTTCGTCTAGATTGGGTTTCAAGACCC 3486655 37 94.6 35 ........TG........................... TATACGTCGGGGATCGGAGTCTACTCTGTGGTCAT 3486727 37 94.6 38 ........TG........................... ATCATAAACCAGTTGTTGGTGTCGGTCAGGTACTTCCA 3486802 37 94.6 35 ........TG........................... CATTGCTCCAACGGCTCCAAGACCCAGTTTGGGTC 3486874 37 89.2 33 .T......TG.............C............. TTCTGGTTGGTTCACACAATTCAGAGGTTCAGC 3486944 37 94.6 37 ........TG........................... AATTATAGGTGACATATTTCCTCCGTTGATTTGTTTG 3487018 37 94.6 37 ........TG........................... GAGGTTGGGGTTAGAAAGCAGTACCTGCCTTCCCTGT 3487092 37 94.6 37 ........TG........................... ATGGGGCTGGCACCCCTAAAAGAGGTTGAGGATGTCG 3487166 37 94.6 36 ........TG........................... ACGAGGTCAATAAATGGAACGAAAGTGAGGAAAGGG 3487239 37 100.0 38 ..................................... CAGTTATTGCCACCCTGGTAATCGGGCGTCTGATGGGC 3487314 37 100.0 38 ..................................... AATTCCTAGCCGAAGCTGATTTCTTGCAATGCGGGCAG 3487389 37 100.0 38 ..................................... AATGAAATAAATAAATGAATGAGTCAAATATCCTGGCA 3487464 37 94.6 36 ........TG........................... TCTGTGTTTCTCACGACAGTTCTTCCTCTTGCGTTT 3487537 37 94.6 38 ........TG........................... TGATACTTCACTTGATACAGTACTCTTGGAACTCAACG 3487612 37 94.6 36 ........TG........................... AAGACGCTCGAACCATAAGGAGGTCCCCTCATATGT 3487685 37 94.6 34 ........TG........................... ACTTCGTCGTCATTTGCAACCCAACTTTGTCCGT 3487756 37 94.6 38 ........TG........................... CTTACATTGGACCTTTGTAGCTTCATCTATTGCACTCC 3487831 37 94.6 36 ........TG........................... GCTTGGTAAGGCATATAACGATCAGTCAAATCTCTC 3487904 36 86.5 0 .A.......G.....C..A...........-...... | T [3487939] ========== ====== ====== ====== ===================================== ======================================= ================== 30 37 96.8 37 CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC # Left flank : CCAGTTATTCAGCCGCGCCGCTGCCGCGCGTAGGGCGATCATCTCGGCGTGGGCGGTGGGGTCCTGGTCGCTCTCCTTGCGGTTATAGCCCGTGCCGATGACCGCGCCGTTCAGCACGGCCACCGCGCCCACCGGCACCTCGCCCAATTTCATAGCTTCTTCGGCCTGGGCCAACGCCAGCCGCATCCAGATTTCTGTATCATCCATTGTGTATTCCCACGACGGGCCGGATTATAGCCCGGTGGGCGAGAGCCGGCACACCCAGTGGGTCAGCGGTTGGGGAGATAATATTCCACCGCGGAGCAACGCGTAAACAGATGAGCGCGAGATGAGGAAAGGGTTTTTTGGAAGTGAGTTTGCAGAAGGCTTGGCCAGAGATTGACGGTGGGAGAGGGGTCACCTATAATGAGGAGGACGAGGCGCGAAATGGGGCGCAACAAGCAAGCGCGAGGGACAGATGGGCGGCAAGGGCGGTCATTGTCCCACTGTGGATAACCGGA # Right flank : CTGTATGGCAGCCCCCACCAACTTCAGGCTCTGGAAACAATAACCCGCCGGCAAATCACCACATTTGCCGGCGCGCCCCTTATTGTCAACCAGCCACGACCCGCTACAATCTGACCGGCCATGACCAAACGCTTCATCCTCGTTGCCGGCAATATCGGCGTGGGCAAGACCTCTCTAACCGAGCGGTTGGGTGGCCGGCTGGGCTGGATCACCGGCTTCGAGTCGGTCGTCGATAACCCCTACCTGGCCGAGTTCTACGGTGACATGCGCCAGTGGTCTTTCCATTTGCAGGTGTTCTTCCTGGGCCATCGCGCCCAGCAGCATCTGGCCCTGGCCGGTCAGGCCCAATCAGCCATCGCCGACCGCAGCATCTATGAAGACGCCCACATCTTCGCCCGCGTGCTCCACCACATGGGCAATCTCAACGAGCGTGACTACCAGTCCTACCGCAGCGTCTATGAACTGATCGTTGCCAATTTGCCGCGGCCCGACCTGCTGCT # Questionable array : NO Score: 5.79 # Score Detail : 1:0, 2:0, 3:3, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC # Alternate repeat : CGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.00,-1.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA //