Array 1 923009-924826 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP042002.1 Streptococcus agalactiae strain GBS30 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 923009 36 100.0 30 .................................... AGAGGTTTTGAAATTTATCGAACAACAGGA 923075 36 100.0 30 .................................... AACATTAGCCTTTTCTAACTCTTCAGCTGT 923141 36 100.0 30 .................................... TATGTCTTCTAACAGTTGCTTCTTGTGCTT 923207 36 100.0 30 .................................... CCGTCAAACAAGAGCGACAGCGAAACAAGC 923273 36 100.0 30 .................................... TTTTATTGGTTTTCTAAGTGCTCGACCATC 923339 36 100.0 30 .................................... AGTTACTTCTGCTTGGGTTTGATAAGGGTC 923405 36 100.0 30 .................................... GAAATGTGGAGTCATTCAGGTTGATGATGG 923471 36 100.0 30 .................................... AAAAAATAAATGACTTTAAAGCACTTGGAG 923537 36 100.0 30 .................................... TAGTAGCCATTATTATTATGGCTTTTATTT 923603 36 100.0 30 .................................... GGATGATTTCGATTATGCGGCGGTGGTTGA 923669 36 100.0 30 .................................... AAATGTTAATTTCATATCTACATCTTGTTC 923735 36 100.0 30 .................................... GGATGATTTCGATTATGCGGCGGTGGTTGA 923801 36 100.0 30 .................................... AAATGTTAATTTCATATCTACATCTTGTTC 923867 36 100.0 30 .................................... ACATAACGTTCAAAAGTTTCCACTAATAGC 923933 36 100.0 30 .................................... TCAAACAACATTGGTGATCTTATTGCGGTA 923999 36 100.0 30 .................................... TTATTTAAGACGTGATTTAATGTTAAAACT 924065 36 100.0 30 .................................... CAAACTATCTTGATTATAAGTGGACTGATA 924131 36 100.0 30 .................................... ACATTTGTTAAATTTGAACTTACTGGAAAT 924197 36 100.0 30 .................................... TCCAAAACAAATACGAATGCTTGAGCGATA 924263 36 100.0 30 .................................... GATTACCTTAGATGATGTTCTAATCGGTAA 924329 36 100.0 30 .................................... TCCAAAACAAATACGAATGCTTGAGCGATA 924395 36 100.0 30 .................................... GATTACCTTAGATGATGTTCTAATCGGTAA 924461 36 100.0 30 .................................... TTAACAGTTTCAAGTCTGTCTTGTTACTTA 924527 36 100.0 30 .................................... ACTCTAAATGATAGTTATGAGTTAAATGTT 924593 36 100.0 30 .................................... CAAATTACAGTTTCGACTGATTATGGAAAT 924659 36 100.0 30 .................................... ATATGTTCCACTCTATGAATTTAGGCTCAT 924725 36 100.0 30 .................................... TACTTGACGAATTGAAGATGACGGAATTTA 924791 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 28 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //