Array 1 293823-293987 **** Predicted by CRISPRDetect 2.4 *** >NC_011567.1 Anoxybacillus flavithermus WK1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 293823 30 96.7 37 ....T......................... TCATCCATCCTTTCTTTTTTGTCTCCTCTATTTTAAC 293890 30 100.0 38 .............................. ACAAGGAACGTGCCTACGCTCGTTCTCACTTTTATGAC 293958 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 3 30 98.9 38 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : GTTGAAATTCGCGGGTTGGAATTTGAAAGGTTACAGGATTTTTTTCAAACATTTTTCTTTATGTATAAAAGTAGTCCTCCTTGTAAAGTAACTGCGGTGATCGAAACACGAATATTGTCGCAGAATGAGTTATCGAAAAAACGGGCGAAATTGAAAGAGTATACCAATAGGCCAATAATTTTGCACCCGTCAAAAAAATTATGCACCACATAGAAGGATTGAACTTTGCTTTAAAAGAAAAATGTGTAATACTTTTCTAAAGTTGTGTCTTACCAATCAATCAAAGGAGTAGCGTCTCGTTTAATTTTCAGATCGTGAATCTTTTCACAACTGTCGTCGACCCCCAATGTTGCAAAAACCCCAGGGGATCGACGACAAGTTATTTTTGTGTTTCTTTTCAGACGTATCAACGTATAAAATGTATTGACTGAATTTTCAAACGTGCATATAATAGCATTGTATAGCTTTTCCATATGTTGATTTATCAACATCTTTTTGGG # Right flank : CTTTTTTCTTCACTTATGTTAGTTAAACGGTTGATGTTTCCTTGCATGTTGTGGACATCGAGTGCGAGTGCATCGTATTTTGCGATGAGCGCCTCTTGACCATGACGAACCGCTTCGCAGATCGCCTTCGTTTCGAGCGTTCTTTCGTCGAGTCGTTGCATTTTTTCGTCAAGTGCTTGAACTTTTTCATCAAGTGCTTGAACTTGTTGGCGTAAGGAAGATACTTCTTTTTCTAACGAATCCACTCGTTTCTCCATCGATTCCACTTTTTTCCTTGGTACTTTTACTTCGTGAAGCATGTCGTAAAGCAGCGATTCTACCATTTCGTTCGCTCTTTTGTTTCCAATTCACACGAATCGACAGCGAATGACTAGCGAACATGTTCATTTTTTAGGCAAGCGGCTTGAGGATCACATTTTCCCAACGACGTTTTAGTAGAGAACGAATAGCGAATCGATTACAATGATAGTAGATGAATGATAGAAGGGGAGCATAAGATG # Questionable array : NO Score: 8.31 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 804177-809818 **** Predicted by CRISPRDetect 2.4 *** >NC_011567.1 Anoxybacillus flavithermus WK1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================= ================== 804177 29 100.0 35 ............................. ACACATGATGATATAGTCAAGCTGCTCGCGAATAT 804241 29 100.0 38 ............................. CTTGATCGTGAACGGCCGAAAGTTCTTATTGTTGATGA 804308 29 100.0 37 ............................. TTGTTCAAAGTTGCGAAGTAGAAAAGACAAGAATATC 804374 29 100.0 37 ............................. AGCGAAAAAGAAGGAAGAAATTATTGTAGCACTCAAT 804440 29 100.0 35 ............................. TTGCTCTTTCTGCACTCATTTATTCTTAGTTTTCC 804504 29 100.0 38 ............................. ATCAGATCACTAGCAGCAACAGTAATATTAGTAGTAGA 804571 29 100.0 38 ............................. CTCCTTCGCGGTTTGTAAGAACACTTGAGACTTTTCCC 804638 29 100.0 37 ............................. TGCCAGATAAGTCGGTCGCGAGTAGTTGCGGAGCAGG 804704 29 100.0 36 ............................. CATATCTGGTCCGCTTGGTCCACGTCGTTTGTTTCG 804769 29 100.0 37 ............................. TTCATAAGCACACTCGATCATTTCAAACACTTTTTCG 804835 29 100.0 38 ............................. ATTGATAAATTGTGTTTAAACGGATGTAAACAAAAAGT 804902 29 100.0 36 ............................. TGAGATTGCAAAACGTCCTGGAATCAAATCCGCTTT 804967 29 100.0 36 ............................. ATCTTCGGCATTTTGAAGTTTTTAACCGTGCTAACA 805032 29 100.0 35 ............................. TTGAAACACAGGTGTTTTTTCTGACTTACCGCCAA 805096 29 100.0 35 ............................. ATTGCATTTTTGACATGATACATCATCAAAACTAC 805160 29 100.0 37 ............................. CGCACCGCCATGTTTCATCCGCCCAAGCGCCTCTCTA 805226 29 100.0 36 ............................. CCTCATGTTCTGCTTTGCAATCAGTACACACGGCAA 805291 29 100.0 36 ............................. CTTTGTTTCCAGCGGAATTCGCTTTTTCAAATACAG 805356 29 100.0 37 ............................. AGCTTTTCTTTCCCGACATTCACAAAAACTCGCAATC 805422 29 100.0 36 ............................. TAATCTCTGAAGAAATCCTAGTATTCACTCGAACCA 805487 29 100.0 37 ............................. TGTTCCTTGAATTTTGCTTCCACTGCTTTTTGAACAG 805553 29 100.0 36 ............................. GACGTTCCGAATGAAGAAGCCGAATGGCTTCTTCAA 805618 29 100.0 38 ............................. AAATTGATGGATGAAGCGATGCGTGAAGCCGCTTACGC 805685 29 100.0 37 ............................. AAATGGAGAGCAAAAAGGAAAATGCAAAGGATTTGGA 805751 29 100.0 38 ............................. AGAAAACAGCAATGTTGCTTCTCAATCACTTGGTGATA 805818 29 100.0 36 ............................. TCGTGAAATAAAACAGAAGGCGCTGGCGCCGCGACA 805883 29 100.0 37 ............................. ACAATCTGCCACGTTTTTTTTATGACAGGAACGATGG 805949 29 100.0 35 ............................. TTGCAACGCATCCGCTCTATTTTTCTCTTTATCCA 806013 29 100.0 38 ............................. ATTTTCGGCATTTTGAAGTTTTTTACAAAGTCTGCAAA 806080 29 100.0 36 ............................. GCGGTGGAGAAATGAAACTAAAGGACATCGCCGCTC 806145 29 100.0 37 ............................. GCAAAAGAAGGCAAGTCTTATGAGCAAATCCTCCGAG 806211 29 100.0 40 ............................. ACGATGATTTTGCATTTTTCGCTGTTTCTCTCGGCTCTTG 806280 29 100.0 37 ............................. AATTCGCGAAGTAAGTTTTGACCTAAACCGATCGTGT 806346 29 100.0 38 ............................. TATTGACGCTATTTTTTAAAAATTAAACTGATTTCATT 806413 29 100.0 38 ............................. GCATATTTTTCTGATCCTTCTGCTCGTGCTACTCTGTT 806480 29 100.0 36 ............................. GCAAAAGAAGGCAAGTCTTATGAGCAAATCCTCCGA 806545 29 100.0 38 ............................. AGGATTGAAACGAACGTGTAGCACGGCTAGCACGTTGA 806612 29 100.0 36 ............................. TTGCTTTAACTTGTTGTTCAAACGGCAAGTCCTTAA 806677 29 100.0 36 ............................. TGTTTTAACCTCATCTTTTTTCCCTTCCTCTTTCGC 806742 29 100.0 38 ............................. CTCTAATATGGGGATACATGTTGAAATGTCTGGTCAAG 806809 29 100.0 34 ............................. TACGATTTCGAAAATGAAAACGGTGAACGCGTAA 806872 29 100.0 39 ............................. ACGCTACTCAAGCCTGGTGCAGAAAAGATTCAGATGTTG 806940 29 100.0 38 ............................. ATTTGTCGATAAAGTTGTTGACTTCAAATATTTAGAAC 807007 29 100.0 36 ............................. AAAGGGTCAATATCAATAAAATCTGCTTCATCTACG 807072 29 100.0 39 ............................. TAAGCAAAAGGTTTATGCTCATGTCGTTAGCTATCTCTA 807140 29 100.0 38 ............................. CGATAAAGCCATGTCCAATGTCGCGACGACCTCATCAG 807207 29 100.0 39 ............................. TCGCTTCAAAAATACCCGCTAATTGAAAATTTTCTTCTG 807275 29 100.0 38 ............................. TGAAGAATTCGCAGACTGTTTGCATTTCATCTTGTCGA 807342 29 100.0 34 ............................. GGTTTTGACCTCATCTTTTTTCCCTTCCTCTTTC 807405 29 100.0 37 ............................. CCCAGTGATCAAGGCACGTTCGCTTCGCTCACTTAAC 807471 29 100.0 36 ............................. TACATAGACGTCATGAGGAAGAACAGAGTAGTCGCG 807536 29 100.0 35 ............................. TTCAGAATGAAGAAGCCTTATAGCTTCTTCAACAA 807600 29 100.0 38 ............................. ATCAATTTTTCAGACGGTATGAAAAAGAAGGGGTACGC G [807628] 807668 29 100.0 38 ............................. GTGGGTCGGAAAGGAAAGCGGAGGGAAGGACTTGAATG 807735 29 100.0 36 ............................. GACGAGTTTTTGATGGGTTCGAACGGTGTCGTTTTG 807800 29 100.0 36 ............................. TTGCAACACGTCCGCCCTATTCTTCTCACGTGTCGC 807865 29 100.0 35 ............................. AACCGAGTCGTCTCGTTCTCGCTAACCGAGTCGGC 807929 29 100.0 36 ............................. CAGTCGCTGTTCAGGCTTGACGTAATCCGCTGGCGC 807994 29 100.0 38 ............................. TACAGTCGAAGTTCGAGCTTACAGGCGACGCGGGAGGC 808061 29 100.0 39 ............................. TGGGAAACGGTGTTTGTGGAAGATGGCAACGAAATTACG 808129 29 100.0 36 ............................. AACAAAAGCTAGTTGAAGAACGTAGGGAGTATCTGA 808194 29 100.0 40 ............................. CCGTATTGGCTGAAAGACAATCAAGTGATATGTATGATCC 808263 29 100.0 35 ............................. TTCAGATTCTACTTCTACCCGTTCGGTCATTCGTA 808327 29 100.0 40 ............................. TTCTTAATTTCATATGGTGCTCGACGTTTCTTTGATATGA 808396 29 100.0 40 ............................. CAAAAGATTCAAATATGATTGAGAGCACGCTTTTAACTGT 808465 29 100.0 39 ............................. CGTTGCCGATCGTTTCAGCATATAAACGCTGTATAGCTT 808533 29 100.0 41 ............................. AAGATGTATAGCGATGATAAAACGCATGACCTAATATGCCG 808603 29 100.0 38 ............................. CAATGATGTCATCAATAGCATTAGAAACAATCATCCGA 808670 29 100.0 37 ............................. ATCACCCACATTTTCACGTTTTACTTGGCGTTAAACC 808736 29 100.0 37 ............................. GTCTGTGATGTCCGTATTGTTCGTAATAAGCGGAATA 808802 29 100.0 36 ............................. ATCGCAAAACGGGCCGTTTGGGATCAGCATTCAAAA 808867 29 100.0 38 ............................. CGAGAGAGGCGGAAGAACTTTGGGGATTGGCACAAAAC 808934 29 100.0 36 ............................. TACAAGCTCAGCATCGTTACATACAACAAGAAACAC 808999 29 100.0 35 ............................. ATGACAAAACCAGAAAAGAAATTCACATACCTTGC 809063 29 100.0 40 ............................. TTCAAGAACGGGAAAACAGGTCAATCGGAAGTGCAGTTTA 809132 29 100.0 37 ............................. CAACAAAACGATAGAAACGCAACACTTCCGCGTCAAG 809198 29 100.0 39 ............................. TAAAAAGGAGTGACAACATGAGTATTTTCCGTGTTGAGA 809266 29 100.0 37 ............................. TTGGTTTTGCTTTACGCATTATTAGCTTCATTCATAA 809332 29 100.0 34 ............................. TCAATAACAAACACATCGCCAGCTTGCACGTTAA 809395 29 100.0 36 ............................. ATGGATTGACGACATTGGGGAAGAACTTGTGATTGA 809460 29 100.0 36 ............................. TCAAATGGATCAGTCATCGGTTCTTGTTGTGGTTGT 809525 29 100.0 39 ............................. ACATATACGAAACAATGGAATTAACGCAACAACGATATA G [809553] 809594 29 100.0 37 ............................. TTAATACCTTCCATCGTTCCTGTCATTCAAAAAACAT 809660 29 100.0 37 ............................. GTATTTAGTGTAGTATTCATTCAGTTCCTGCATGTGT 809726 29 100.0 35 ............................. ATAAACAAAAACCACCGCCTCAGCTTATTCGCTTG 809790 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ========================================= ================== 86 29 100.0 37 GTTTTATCTGAACGTAGTGGGATGTAAAG # Left flank : TTTTATTGGCGATGAACCTTATAAACCGTTGAAGGCATGGTGGTAATATGTTCGTAATTATTACGTACGATGTGGGAGAAAAACGTGTAAATAAAGTGTGCAAAAAATTAAGGGAATACTTAACATGGACACAAAACTCTGTGTTCGAGGGGGAAATCACAAAAAGTTTGCTAATGAAATGCCTAAATGAAATCGATCAAATCATTGATGAAGATGAGGATTCCATTTATATTTATGAAGTAGCTAATCCAAAGAACATTAAGAAACAAGTATTTGGACAAGAAAAAAACTTTGATGAACTCTTTCTTTAACAGTTGCAGTGAACCTCTAATTTCAAAAAATAGGTTAAAATGCTTGATATATCAACGAAAAATGCGGTATTTTTGAAGAAGAAGAAAAACACAACTGGCACTTTACTGCAAAACGCAGAAGATTGTCATATCAACGCTTTCCAAAAATCGTTGATATGACAGCACTTTTTGCTTTTGGATTTTAGGGGG # Right flank : GAAAGTGCCAGCTGGTACAGGCGTGGTTGAAAACTACAAGTGTAAATTATCATTTTATCCCCGAATAAAACGCCTTCTTTTTTGCAAATTCCTTCGGAATGTCCCCCTCCCCTTTTCTGAAACAGTATGCTAAATTTTTAGTGAATTGTTTCGGAGGGGGAGGACGAGATCGTGATTCAGTTGTATGACTTCGGGATCGATGTGCAAACCTATGCGAATCGAGGGAAACAAAATGCGTTTCCGTTCATCCATCGTTGTCCACATTGTCAGGCAAAACGCAATCTTTATCGTCATGGCTATTACGAACGAAATGCATTGGTGGGGCAAGATGCCTATCGGATTTGGGTTGCTCGTTATCGATGCGCGATATGCAAAAAGACGGTGTCCGTGCTTCCCACGTTCCTATTGCCGTATTTCCAATACACGATTTGGACGATTATCCACTGGCTCAAGGAACGCCTCTCCTCTCTCTTAGGCAAGGGGAAGGGTTCGTCCAAGTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGTAGTGGGATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 3 812915-816907 **** Predicted by CRISPRDetect 2.4 *** >NC_011567.1 Anoxybacillus flavithermus WK1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================= ================== 812915 29 100.0 37 ............................. AGAAGGAATTTTGTATCATTTTTGTATCAGTCTTGTG 812981 29 100.0 38 ............................. AAGCATCGGTTAGATTACATTAAAAGCTTCAAGTATGT 813048 29 100.0 35 ............................. TTATTATTTGCATGAATAGCCGCATCGAGGCGTGC 813112 29 100.0 38 ............................. TTTTTGGAAGTTATACATAGTTTGAGACGGATTTAAGA 813179 29 100.0 39 ............................. TAGAGATGAAGCCCTTTTACAGCGTCCGCAAAGCGTTTT 813247 29 100.0 36 ............................. TTGATAAACACGTTAACAAAAAACATCGCATGTTCC 813312 29 100.0 37 ............................. GAATATTACGAAAAGCTTGAATGGATGCTACCTGATG 813378 29 100.0 39 ............................. GGGAGTTCTACACTAATCTTTTCAGGGAACAACTCATTC 813446 29 100.0 36 ............................. GAGCGGTTTGACGTGGAATTAGGAGCGGAATTGTTT 813511 29 100.0 37 ............................. GTTGAATTTAATGATGGAAAGACGATGTATAGTGCTG 813577 29 100.0 37 ............................. AGGAGAAACAGAAGTGGAAAGCATCGTTCATTCCTAT 813643 29 100.0 35 ............................. AATGAACGCTCCTAAACTTGCGAATAAACCTGTAA 813707 29 100.0 36 ............................. TTTTTTCGTCTGACGAATATTTTTTCGTATATACGT 813772 29 100.0 36 ............................. TAAACTTCGTGTTCGGTGACACTTTCACAAATTTTC 813837 29 100.0 37 ............................. ATAAGTTCAAAATGCCCTTATAGTGCAATATTTTTTA 813903 29 100.0 35 ............................. GACGCAGAAGATGACACTGGCATCGAATGGCTCAA 813967 29 100.0 38 ............................. CTGGGAATGGTTTGAGGAACAAGTGAAACCGTATCGTG 814034 29 100.0 36 ............................. TGTCACCCCTTACGCTTTCTTGTGCACGTAAATGGC 814099 29 100.0 38 ............................. TAATGACGCTATTTTGTTAAAAAAAATTAATTAATTTT 814166 29 100.0 37 ............................. TGAAATAAAACAGAAGGCGCCTGCGACGCGGACAGCG 814232 29 100.0 41 ............................. AAGCCGAATATGCGTCATTTGTAGAAAACGGGCATCGCATC 814302 29 100.0 35 ............................. CTTCTTCTTTCGAGTATGTTTTTGTATCATCTAGC 814366 29 100.0 35 ............................. TATCGGAGAAAGTGAATCGACACAAAGCTTCTTAA 814430 29 100.0 37 ............................. TCAAGCGTCACATCGGCGACTAACTGAAAAAGAACGC 814496 29 100.0 38 ............................. CTTGCCGAGTTGGAACGGATGTATATCACGTTGTGTTG 814563 29 100.0 34 ............................. TACTCGTACAATTCAATAACATGCCCCGATACAA 814626 29 100.0 39 ............................. AATCGTCCCCGTTCGCAGGGTAGTTAGTACCTCGCTGAA 814694 29 100.0 40 ............................. AAGACATCAACGATTCGATGATCGAGAACCATCTCAACCG 814763 29 100.0 35 ............................. AGCATAGCTTCGCGGTGTGGTTTGTGCCATTCGAG 814827 29 100.0 35 ............................. TCCACCGAACAACGAGCGGTTGCTTGGTTGACAAA 814891 29 100.0 39 ............................. TCATAATGAAAGGCGGTACTTTTAAACCCAACCGCCCTA 814959 29 100.0 37 ............................. GAAGAATACGCAATTGCTGAAAAAAACGGGATATCTC 815025 29 100.0 41 ............................. ATTCAAAATATACATGACATTATCAACCTGCCTTGTATCAA 815095 29 100.0 36 ............................. TGTTCGTCCAGTTCAACAATTTCCGCAAGTTCAAAA 815160 29 100.0 37 ............................. ATGAATGTGAAGCGTACCATAAGTTCGAGCCAGTGAA 815226 29 100.0 36 ............................. AAACAAGTGGCGTGGGCTAGCGATATTCGTGATAAG 815291 29 100.0 36 ............................. CCACGTCAGTACTTTGAGTTGTTTTTTGGAAAATGG 815356 29 100.0 36 ............................. TAATGGATAGCGGAAATTGCATTGTTATCACCAAAA 815421 29 100.0 36 ............................. TATTTAGCGGAGATGTGCGTATTAAGCCGGATTTAA 815486 29 100.0 40 ............................. AAGACATCAACGATTCGATGATCGAGAACCATCTCAACCG 815555 29 100.0 39 ............................. AATAAAAAACGCCACCACGTCGCACACATCGTGCGAGGT 815623 29 100.0 39 ............................. TTCTTTTCGAAAAAGAATCGGCTAATCTTCCTCTTTTGC 815691 29 100.0 38 ............................. AGACTTCCGCAAAAACAAAATCATTCGTGAAATGGACA 815758 29 100.0 39 ............................. CCGATCATTTGTTCCAACATAGGGCATAAAACATGTATG 815826 29 100.0 35 ............................. AGATATATTTACGTTTGACGGAACAGCCCCGCGCA 815890 29 100.0 35 ............................. TATTACCACACAGCTTCCCTTCGCTATTTTTTGTC 815954 29 100.0 36 ............................. CGTTTTTGAAACTCTATAACCGTTACATATTTGAGA 816019 29 100.0 38 ............................. GAGGAACAAACACAAACGCCAGAACCCGGACAGACCGA 816086 29 100.0 37 ............................. ACGGCAATATTGAAACGTAGCAGGGTTGTCTTTTTCC 816152 29 100.0 36 ............................. CAAACAGAAAGTTTTTTGGTTCTTTTTTTCAAAAAA 816217 29 100.0 37 ............................. GACGCTCTTCAAAGGGTTTCGGTCGACGTGGCATGTC 816283 29 100.0 38 ............................. AGTAAAGCGGATGAATGGCTAACAGAAGAAGGTTTATT 816350 29 100.0 36 ............................. TGTTTCCAATGATTTTGTGAAGTGGCGGTCTAAATA 816415 29 100.0 39 ............................. GTCAACTTGGCAGAAGAAGCGGCAATGACCGCACAACTA 816483 29 100.0 40 ............................. ACCGAAACAGAAAGAATTTAAAAGCAAAAAGGGAAATAAA 816552 29 100.0 36 ............................. GACGCTAAAGAACTCGAAGGAATGGCTTTTGAAACT 816617 29 100.0 39 ............................. CAAGAACAAGCGACATTAGTGTTAAAGGAGTTTATGCAA 816685 29 100.0 37 ............................. CGCCAATACCCAGCGGAAGGGCTTGTCGCGTTGTTGG 816751 29 100.0 37 ............................. CTCTTTCACTTCATGAGGATTTAATTTGAATTTTTCC 816817 29 100.0 35 ............................. GTTAAAGTGTCTTGACCATTCATAGACCGTTCTCA 816881 27 93.1 0 ......................--..... | ========== ====== ====== ====== ============================= ========================================= ================== 61 29 99.9 37 GTTTTATCTGAACGTAGTGGGATGTAAAG # Left flank : CAGGACTACCACACTTACAAATACGGCTGCGCTTGAATCACCATCGTCCGCTTCAACAACGCATCATCATGCGATATCGGATGGGAGCGCTCTCGAAAGAAGAAGTGGCCGCGTACATTGAGCAGCGAATGAAGCAAGCAGGAGCGAAACACTCGATTTTTACCCCTGCGGCTTTAGAGGCGATCGCCCTACAGTCGCAAGGATGGCCACGAGTCATCAATACGTTAACGACGACGTGCCTTTTATACGGCTACCAGCTAAAAAAGGACGTGATTGACGAAGAAATTGTTCGAATGGCGGTGGAGGAAACCGGGGCATAAGGAAAGGGGCCGAACGGCTCCTCTTCTTTTTCTGATTTCCGTCTGAGATAATGTGCAAAGGATCGGAAAAAGCGTGCAAAATCGGAGGGAATTCGCAAACATTTTGCGCAGTATTTCCGATTTTCATCCAAAATAATTTGAAAAAGTAGTTCTGGAATAGTGTGCTAATTTACACTACAA # Right flank : GCCTCCCTCTTTTCATCTATTTTTCACCATCGACTTGTACGCTTAAGGTATAGGATACATGATGTGTGAAAGGTAGGGGAGTATATGTTGAAGAAAAACATTGTAAAAATCATATTAGACATATCGATGGCGATTACGTTTGTGTTGTTAATGAATCCGCGGGTGTTTAATGGTTTGCCGTTTCATGAAGTGGCAGGATTAGTGATTGGTGTCGCTGTGCTTGTGCACATTGGATTAAACTATCAATGGGTTGTCCATACGGTGAAAAAAATATTTGATCGTTCGTTTTCGGGGAAAACGAGATTTAGTTTTTTGCTAAATGTATTATTGCTTCTTTCGATGACGGGCATTATTGTAACAGGTATTCTGATTTCGAAAGTTGTGTTTCCACATCTTCTTGGTGGCGAAAATCATGCGTTACGGGAGATTCATGATGTGTTTTCGAAACTGACGCTTTTGCTTGTCGGCGTGCATATCGCATTGCATTGGCAATGGATTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGTAGTGGGATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //