Array 1 3813-4634 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJWZ010000327.1 Streptomyces alkaliterrae strain OF3 NODE_327, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3813 29 100.0 32 ............................. GACCAACGTCGAGTTCGGCTTGGACGTCGCCT 3874 29 100.0 32 ............................. TGTTGGCGTGATACCAACGTGGCCACCAATTT 3935 29 100.0 32 ............................. AGCCCCGCCGGCGGCAGGGCTGGAAGGGAGGA 3996 29 100.0 32 ............................. CGGGAGGGGCCACATGACCGGGGACCTTCGTG 4057 29 100.0 32 ............................. GAGTCGACGATCCGCTCGGCGTGCCGCCAGTC 4118 29 100.0 32 ............................. GTTCTGCAGGGTCGTCGTCGGGGTCGTCGGTA 4179 29 100.0 32 ............................. GCGAGCGGCGCCGCGCCGGCGTCGGCATCACC 4240 29 100.0 32 ............................. CGGGCGCTGCGCTCCCGGCTGGCGCGGATGCG 4301 29 100.0 32 ............................. TCGCAGTCGACGACGCCCGCCGGGCCCGAGCC 4362 29 100.0 32 ............................. GCCCGCTTGGCCTGCTTGGCCAGGCCGTCCAG 4423 29 100.0 32 ............................. AGGGCGTGCAGCAGCGCCTCATCGCGGCTGTT 4484 29 100.0 32 ............................. CAGGCGCGGCGTCTGCTGAGCCCTGACCAGTG 4545 29 100.0 32 ............................. CTCTTCGGAGAGCCGTCGATCCAGCTCAAGGG 4606 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 14 29 100.0 32 CTGCTCCCCGCGCACGCGGGGATGGTCCC # Left flank : GCGAAGGCCGGCGTCGCCTTGCCGATGTCGTGCGTTGTGGCCAGCCACACCGCCAACCGCCGCCCGTCCGCCTCTCCGGCCGGCAGCGCTTCGGCGGCCAGCCGGCGGACCTGCTCCGGCAGCCACCGGTCCCACAGCCTCCCGGCCACGGCTCCACTGTCGGCCATATGCCGCCACAGCGGCAGCCAGCCACCACTGGACCGGTCGTGCTTGGCCCACACCACCCGCGCCGGAGGTGACAATTCCGTACCGAAACGCGGCAGTTCATCCCTCTGCCCTGTCACGACGCGAGTACATCGCGTTCCTATCCGGCCTGTCCAGCAAACACCGAAATCCGCCCTCTCGACGAGGGACTGACTACGATGCCCCCGATCCGCGATGCACGCGAAACGGTCCCCACCGCCCCGCAGACCGACCCACCCAACCGGGAGCGAAATGTCCGAATCTCCAATAGTTGCTCAGCCCGGCCACCCGCCGCCCTAAACTCCCAGCTCACCAAG # Right flank : CGACCTGCGCCCCTCGTCCGTCTGCTCCCCGCGCGTGCGGGTCGTCCTCGCGCCCGACCCGCACGCCGCGATAGCACTCCGGGGAGTCGGCTGCACTCTTGCCTCTGTGTTTGCCATTCCTGAGGCGAATCGGCGGTCACGGATTTGCGTGTACGCGGCGCTGGCGCGTGTCTCGTAGGTTTCTGCGGACAGTTCGTGGGCCATGATGAGCGTTCGAGGTCTGGGCGGTTTCCCGCTATGCCGACCGCGGGTCCGGGCAGCGTTCGCGGCCGCGCGGGCATGTCAGCAGCGTACGAACGACAATCCGGCCGGGTTCGTAGTAGCCGATGTAGGCGTCCTGGCCGAGTTGGAGCACGCGGTGTGCGTGTTCCAGGTGTTGCGCCACGGGGAGCCCGCCGGGCGCCGGTGTGTGTCCGCACAGCTCCTTGGCGAGCCAGGCGTACGCCTCGTCGGCGTGGTGGTAGGTGCCGGCCAGCATGGTCTTCGGCTTCCGGAACCAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [38.3-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1945-388 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJWZ010000230.1 Streptomyces alkaliterrae strain OF3 NODE_230, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1944 29 100.0 32 ............................. CGAACTCGAGCTGGTCGCGGACGACGTCCTCC 1883 29 100.0 33 ............................. CACCCACCCCGCACAGACAGGACCCCGACATGA 1821 29 100.0 32 ............................. TGCACCCGCGGCCGCCGCTCACCGAGCGCGAA 1760 29 100.0 33 ............................. GGCCCCGCCGTCAGGCGGGGCCAGAAGGAGGAG 1698 29 100.0 32 ............................. ACCGACGCCGAGAACCACGTCTGCGAGGAGAC 1637 29 100.0 32 ............................. AGCTTCCTCCGCGAGGACGTGACGCTGGAGGA 1576 29 100.0 32 ............................. AGCCTGTACGCGTAGATCGCGCCCGCCACGAC 1515 29 96.6 32 ....................A........ GCCCTCAGGACCACCGGCGGAGGCAGTTCCCA 1454 29 100.0 32 ............................. CCTGTGGGAACATGAGCCGCATGGCCGACACC 1393 29 100.0 32 ............................. CGGCGGACGGTGAGTAGCCACCGCCGGACGGC 1332 29 100.0 32 ............................. TCCGCAAGTAGCCGCGCACACCACGCCTCATC 1271 29 100.0 32 ............................. TACGTCGTCCCGGCCGGCGGCGACGTCCGCAG 1210 29 100.0 32 ............................. TCTACGACGCCGGAATGCGGCTGGCCGATCCG 1149 29 100.0 32 ............................. AACTGGGTCCACCGCAAACGCGGCTCGGGACG 1088 29 96.6 32 ............................T CATCCACGCAGGTCAGCGAGTTACGTTGGCCG A [1065] 1026 29 100.0 32 ............................. TTCACGAAGGCTTCCGGGTCGCCGAGGACGAA 965 29 100.0 32 ............................. GGGCCCGCCCGCCGGAAGCCTGCCCGGAGTGC 904 29 100.0 32 ............................. CGTTCTGCGGGCCGCCCGCGTCCGCCTCTACG 843 29 100.0 32 ............................. ACCGGGATCGACGTCGGCGAGGCGACCGGCAC 782 29 100.0 32 ............................. AGCGGGCCAGGGGTGAAGGCGCCAGGGATCCA 721 29 100.0 32 ............................. TCGATCATGACGATCAACGCCGCGCCCGACGA 660 29 96.6 32 .........G................... CACACCCAGCACGGCTCGTCGCGGTCGGCGTT 599 29 100.0 33 ............................. GCGCCGCGGACCTCCTGATCGGCGCGAAGTGCG 537 29 89.7 32 .........G.T...A............. GTGATGAGTTGGCGGGGCTTGAGGCAGGTGAA 476 29 89.7 32 .........G..T............C... TTCGACGACCCGGAAGTCGATGAAGCCGGGTG 415 28 75.9 0 .........G..TG.....CC.-...G.. | ========== ====== ====== ====== ============================= ================================= ================== 26 29 97.9 32 CTGCTCCCCACGCACGCGGGGATGGTCCC # Left flank : CCGGCCTGACCACAGTGGTCACAGCACATGGACACCGAGCACATCTTCAGCCACCCAAGAGCCACGCCAAACATGGCAAACGCCAAGAACGTAATCATTTCGCCCCTTCGGTACTTCCGCTGCCTCACCGGGCGCCCCCAGCCGCCGACGCGCAGCAGGATGTCCTACTCCTGACGAATCGTCAAATGCCTGATCGACACGATCACTCGTGCCCGGGTAGTTACTCACCCTGTGGCGATGCGCGCGGAGTTTGCCGACGTGCGCACTGGTGCGCCGTCGCTGGCCGCGCTCCGCCCGCAGGGCAACCTCGTATCCCCAGGTCGTCGCGTCGCGACGCGCCACGGCGGACTGGCCACGATGCTCGTGACCGGTTGCGCACGCAGCAGCGACCGCCTGCCGCTCCACAGACCGCTCCCGGGGGAGCTGGAAGTGAAATGTCCGAATCTCCAATAGTTGCTCAATGCGGCCACCCGCCGCCCTAAACCCCCAGCTCACCAAGC # Right flank : CGCAGGGGCGGCATTGCGGGCGGAACTGAAGTGCCGGCGCAAGCTGATGGCCATCCTCGACCAGCCTGGTCTGTGAGGAGCGAGTGGGCTCGGCGCCCCTTCACTCGTGTGGGCCGCGTCGCTCAGTCCTGGTGACCGGTGCGTGCCTGCGGTCGATCGTACTGACGTCCTCTCAAAGGTGATCACTTCCAGATTCGTCGAGGGCGGGGGCGGCGCGGGCGATGTCGCCGATCCGGCTGGGGTTGAGCCGGCTGGGGCTGAGGGTGACGTGCTGCAGGGTGCGCCAGCAGTGCCCGAGCCGCCAGGGTCTGCGGGCGCCGGGCGCCGGGCGCCGGGCGGCGGGCGCTGAGCTTGGCGGGTTCCTTTGTATGCGGAGCCGGTGCGGGCG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCACGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCACGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.20,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 43-376 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJWZ010000155.1 Streptomyces alkaliterrae strain OF3 NODE_155, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 43 29 100.0 32 ............................. TCATCAGCCCTGGAGGGCTCGCACGTCGCTTG 104 29 100.0 32 ............................. GCGGCGAAGTCCCGGCGGGCGAGCGCGGAGAT 165 29 100.0 32 ............................. TGCTCGGCGCCCATGGCCGCCGGGAAGTGGCC 226 29 100.0 32 ............................. TACACGGCAGCGGACCGGTCATCCACGACCCC 287 29 100.0 32 ............................. GTGGAGCCCGCCTGACTGCCGGGCCAGCCACA 348 29 89.7 0 ............TG..........A.... | ========== ====== ====== ====== ============================= ================================ ================== 6 29 98.3 32 CTGCTCCCCGCGCACGCGGGGATGGTCCC # Left flank : GGATGGTCCCCTCCCGCCCCTCCAGCCGACGCTCACCCCGAAC # Right flank : CAGCGCCACATATGTGGCGCTCAAGGTCTGTATCTGCTCCCCGCGCACCCCGGTTGCCCTGCGGGGGAATTCCGCTGGCTGCTGATGAGTTCAGGGCTATGGTTCCCAGTGGTCCAGCGGCGTGCCGCGACGGTGGTCGTTTGCGGGCCTAGCCTGGATTCGTAGGGACGCTCCGGCAAGCTGGGAGATGAGCGGCATGACGTTCGTGCAGGTGATCGACTTCCGGGACGGACCGCCTCGATGAGGTGAACCGGCTGATGGAATCGTGGGCGGATGCCGCGAAGGGCAAGCGGACGGCTACCCATGCCATGGTGGGCCAGGACCGCTCGGACCAGAATCACGTCGTCGAGATCGTGGAGTTCCCTTCCTACGAGGAGGCGATGACGAACTCCAACCTTCCGGAGACGGACCGGATCTTCCAGGAGCTTGTGGCGCTCTGTGACGGGATGCCGACCTTCACCGATCTGGACGTGGTGCGTGACGAGCAACTGAACAAGGAG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [18.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 392-117 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJWZ010000092.1 Streptomyces alkaliterrae strain OF3 NODE_92, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 391 29 96.6 32 ............................T GGAGCATCCCGGAGCAGCAGAGCCTACCCAAG 330 29 100.0 33 ............................. CCCCATGCAGAGTCCCGTCCCGTACTTCGGCTC 268 29 100.0 32 ............................. TCTTCCTGCGGGTGGGGTCGACTCGTACGGCG 207 29 100.0 32 ............................. TCGGCCCTGAGCCGCCGCCACGGGCGCCCGGC 146 28 89.7 0 .....................-.C..G.. | A,A [119,123] ========== ====== ====== ====== ============================= ================================= ================== 5 29 97.3 32 CTGCTCCCCGCGCACGCGGGGATGGTCCC # Left flank : GGCATCGCACGTCGAGTCCATGACGAGATCCTCTCCGGGCGACGGGAGCAGCAGGTGACGCTTCTGGTGAACCCGGGCGCAGGGAACGGCAAGCTGAAAGCTCTGTATGAGTCATGGGGGTACACGTTCATCGGGGCTCAGCAGCCGGCTGTGGACGGACCGCAACTCGCCGCATTGCTGCGTCCGACTCGCCTCCCGAGCACCCCAGGCTGACACGAGTAATCGCGAACGGCTGCCGGGCTCGTAGCTATGAGAGTTGCGCGACGAACATCGCGAAACCTTCCATAGCCAGGCCTGGCAGTCTAGGTCTCACTTCATCCGCCGCTCGAACCCAACGCCCCAACTGTCACCCGCTACTGTGAAGCTGGGCTGGAGCAAGACCGCCAATGCCGCCGCTACAGCGCAGGAAGGTGACCGCCACCCCCATGCCCGAATTGCCGGAATCAATGAAACTCATGGAGAACCTGCGTTCTCACCCATAAACCCCCAGGTCATCGACT # Right flank : CGCACCGTGCGCAACTGGCTGACGGGCAAGACGCGTTGGCCGCACAGAAGACAGCGGGCAGCGCTGGAGGCGCTGTTCGACTGTCCGGCGATAGAACTGGGGTTCGCCCCTCGCGAC # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //