Array 1 61788-61416 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLNO010000019.1 Virgibacillus proomii strain N4 N4_ctg00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 61787 33 100.0 36 ................................. CATAGAGAATAACATTAAGAATCTAAGAAAATACGC 61718 33 100.0 35 ................................. TGACATACTTATTGTCTTAGCTATTAAATTAACGC 61650 33 100.0 34 ................................. ACTTCTGTGTCGTTTTTCACCAGTTGCTTAATCC 61583 33 100.0 34 ................................. CAAATTAATTATAGATGAAGAAAATGTCGAACTT 61516 33 100.0 35 ................................. TCATTATTGCTCACAACATTTAGTTTTGCGGCCAA 61448 33 97.0 0 ........................A........ | ========== ====== ====== ====== ================================= ==================================== ================== 6 33 99.5 35 GTCGCATCCTATATAGGGTGCGTGGATTGAAAT # Left flank : ATCTAATTTTCGAATACTTCATTCATGCAAATCTGTATGAACTTCCTCTGATAAAGCTTTAATTGCAGAAAGTCATATCTGTTACACTTCAGGAAAAGAACCAAGAAAGTATGGACTTTTTAAAAAGTTGATCATGCTTTAATGGGGAACTTAGGAGCATCTTCTTTAATCTTTAATGGCATAGCTGTCATGTTACCATTTCTGTACGGTAACCGAGGTGTAATCCTTTTAATATAATGTAGCATGGAACATCCTACTTAATGATATATTTTGGCTAGATAGTTTTCGTTAAAAATCAAATGCTACAGTTAAAAAATATATAATACAACTGGTGCGAACCCCAAGTGCACATAAAAACCTAAGGGGATTCGCACCAAAAATAATTTGTTTCATATGAAAAAATAGAATAAAATAGATTATAAAGTTGTAAATTTATAAGATTTTGTTGCAAAATTAAGCAAATCCGTTACATTTTTGTAAATTTTTATGTTATATTCGCT # Right flank : ATTGATTCGTAAGCTGTAGATCCCTCGACTTTCATGCATTCTGTCTTAACTTCCATGAGTTCTGTTGCGACTTCCATGCATCCTCTCCCGACTTTCATGCATTCTCTCCCGACTTTCGTGCATTCTCTCCCGACTTTCGTGCATTCTCTCCCGACTTCCATGCATTCTCTCCCGACTTTATACCAAGGTATCACAGGTGTAATCTGACTAACAGTAAATTCATCTTACTTCCCGTCAGCACTGGCACATCAAGTATTCTAAATTTAAAAGCATAAGACTTCCAATAATCCTCCCCTTAAACATAACGAATTTATTCCTATTCCAGCTCTTGAATAGCGTATGCCGGACCGCCCTTTCCATTTCCCTTTCCTTCACACCGCCATACGGCATCTGGTCAGCACGATAACAACAGGTGTCGTTAATTACAACTCCTCCAACATCGAGTAAATATGGAATCTTATAAGACAGATTTAAATCAGACGTATAAATACCAGCTTGTA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCTATATAGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.55%AT] # Reference repeat match prediction: R [matched TTCGCATCTTATATGGATGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.60,-3.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 388359-387929 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLNO010000019.1 Virgibacillus proomii strain N4 N4_ctg00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 388358 32 100.0 35 ................................ CGCTCAAACTCCGCATCCTGCGCTAGGACGTAGGC 388291 32 100.0 33 ................................ CTTGCCGTCTTCGATTCTTGCCGCTTGATATTC 388226 32 100.0 34 ................................ ATCAGCCAGATCACCTGTCAACGACCGCATTTCC 388160 32 100.0 34 ................................ CCCAAATGGACATAACAAAGTCAACAAGTGTTTG 388094 32 100.0 35 ................................ ACGAGGCGAAACTCGAAAAAGGCAACGTCGCTACC 388027 32 100.0 35 ................................ ACACTAAGATGGAAAAGAACAAAGGTAGAACATAC 387960 32 96.9 0 ..........G..................... | ========== ====== ====== ====== ================================ =================================== ================== 7 32 99.6 34 GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Left flank : GAACATGAATTTTTTATTAGAAAAAATTGACTAATAAAGTTGTTGCATGTCAAGGGCCAAAATGACAACTTTATTATGTTTCACTGAAAGTAATGCCTAATTTTTGAGATGAGAGAAATGACGGCTCTTACATTGGGGATAAAGATAACATGCCTCTAAAACAGGGGTATGCCAACGCCTGAGCGACAAGCCCGCTTTTAGTCGGCTTTCCTTTAGAGTCGATGTTGACTTATCGTAGGAAGAATATACTAGTTTGCTACAGCTTGAGCGTTAAGCTAGACGAATCGTTAGTTTACTTTTTGATTTCCAAATGAATAGACATGTTATTTTGGTGCGAACCTGAAGTGCACATAAAATCTCTAGGGGATTCGCACCAAAATTTGTTTGTATAAAACCTAAAAATGGGATAAAATGGAGGAAATAGAAGCGTTTTTTGAAGCTTACATTCTAAAAAGGCACAAATCATTACTATTTTTGTAAAAAATTAGGTCATATTCGCT # Right flank : TATTATATCTTGAACGACCTTATAATGTAGTCAATTCAAAAGTTTTTTAACAATTGCTTCAACCTCATTGTCATGTTGTTGATTCAAAATGATGCAATCAACATATCTCTTTACGTATCCATTACGTATGTGAAACAATCAATTCTGCATTGCCGACGAGCTGATATGTATCAATGCCATACGGGAGAATAAAATTATTACCTTTTTTTAATGTGTAAGATTTATTATTTACATGTATTTCTGCATTTCCCGTAATCACACTGCATTGTAGAAAATCAGCTTCTAAATGTTGCGTCACTTCGCCCGAAAGTTTCCAATGATACACAGTGAAATAAGTTTCTTTTACTAATTGCTGAACATTTAAACCCTCTTTCTGATAACTTTGCTGTTCAAGCTTTGACATTTGATGAGGGATATTTGTAACTTGCTTTGCTTTGTCCAGATGTAATTCTCTGGGATTTCCTTTTTTATCTTTACGATCATAATCATACACTCGATAT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.55%AT] # Reference repeat match prediction: R [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.60,-5.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //