Array 1 476778-475128 **** Predicted by CRISPRDetect 2.4 *** >NZ_CADEVS010000002.1 Burkholderia gladioli strain BCC1623, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 476777 28 100.0 32 ............................ AACAAGATCAGGCCGACATCGCATGGCACCAG 476717 28 100.0 32 ............................ GTCAGACCTGTCCCGAATGCTCCGCGATCACG 476657 28 100.0 32 ............................ TCACGTCCCCACCGACACGAGGCAGCAGATGA 476597 28 100.0 32 ............................ CTCGAACGGCCAAGCCAGGTCTTGCCGCTTCA 476537 28 100.0 32 ............................ CAAGGACAGCAGGTCCGCCGGATCGAGATTGA 476477 28 100.0 32 ............................ TTCGTGACGCCGAAATGATCGGTAAATGCGGA 476417 28 100.0 32 ............................ TGGACGCCATCACCCCTGCGCAAGTCGTCAGC 476357 28 100.0 32 ............................ TTGAAAATGCGGCCGCCAGTGACGAGATACGC 476297 28 100.0 32 ............................ ATAGCTCGTCGCCCGGTGCGAGTCTGCCGAAT 476237 28 100.0 32 ............................ GAATGGCGCCGATTGATGCCTGTCGACAAAGA 476177 28 100.0 32 ............................ GATATGGAAACGGAGCAGATAGCCGGTGTAGC 476117 28 100.0 32 ............................ ATCGATGCGGCGCCGATCCATGCGCGTGTAGC 476057 28 100.0 33 ............................ CACGTGGGACGACTGCGCGCCTACGGCAACGCC 475996 28 100.0 32 ............................ GTCACCCGCGCGCCCGTCGATGGAACCGAAAA 475936 28 100.0 32 ............................ TCAGGATGCGGCGCGCGAACTGCGCGCGTGTC 475876 28 100.0 32 ............................ TGGAAGTAGATCGAGAGGTTCTCGAACTTCGT 475816 28 100.0 32 ............................ ATCGCGGTAGAACGGCCAGCTCGTTGCCGCGC 475756 28 100.0 32 ............................ TGCAGGTGCGCGGCGCCGACCAGCTCGGGCGC 475696 28 100.0 32 ............................ AGCCGCGGCGCAGGCCCGGTTGAAATCCCGCT 475636 28 100.0 32 ............................ TGTTGAGCTCCACTGTCCTTGATCGCGAACCA 475576 28 100.0 32 ............................ CGTCCGAGCACCGGTAGTCCACGCTGTGCAGC 475516 28 100.0 32 ............................ GTTCGCGAACTGCCAGTTCCGCAACTGCGACC 475456 28 100.0 32 ............................ TCTTTGCGTTCGCTTGTACTCGGCCTCGGCGG 475396 28 100.0 32 ............................ GAAGTACGGCGAGTACGCCGGGAACGGCTTCC 475336 28 100.0 32 ............................ TGGATCAGCTGTGAGGGGGTGTAGAAGCCCAT 475276 28 100.0 32 ............................ GTTGCGGCGGCCTGCGATGCGCGGGCTTCCTA 475216 28 89.3 32 ........T....A...T.......... TAGATCCCACGATCGCCTTCCCGTGCTTGGCG 475156 28 85.7 0 ...TA......T.C.............. | T [475132] ========== ====== ====== ====== ============================ ================================= ================== 28 28 99.1 32 GTTCGCTGCCGCGTAGGCAGCTTAGAAA # Left flank : ATGGTTTGCATTCGCTGATGGCGCAGTCCTGGCTGCAGGGGATGCGGGATCACGTGGCGATCGCGACGCTGGCGCCCGTGCCGGATGGCGCGATGCATCTGGTCGTGCGACGACGGCAGTTCAAGACCAACGCGGACCGTCTGCGACGGCGACGGATGCAGCGCAAAGGGGAAACGGCCGAGCAGGCTGCTGCGCATATTCCCGATTCCGTCGAGCGCCGGCCTGATCTTCCGTATGTGCGTCTACGCAGCGCGAGCACGGGACAGGTGTTTTGCCTCTTTGTCGAGCAGGGGGGCGCGGTGAGCGAGCAGGTGCCTGGGGCGTTCAATGTCTATGGGCTGAGCCAGGGGGCGACGGTGCCCTGGTTTTAACCCTTTTCTTGGGCTGATTTGGTTGGCCTTTGAAATCAATGGGTTAGCGAGAGGGTGGAAATTTGGGTGGTTTGCCCTTTCGCGGGTGTTTGTTGTTTGGAAACAAGGGGTTGGAGGGGGGAGGGGATA # Right flank : CTGCGATATGAAAGTCTGGCAGACAGGCAAGCTTTGCCTCCAGCGCGCGTGTTTTAAAATCGCAGCGCCAACGGCATCGTCACCGAAGTCGTTGATATGACGAGGCATCCTCGCAGGTTGGCTCGAATACCGAGTCGTCCGCGATTTGCGCATGTTCGCACCCGATCGCGGCACCGGCGGCGCCACAAACCAGACAAGAGACAGGACAACAGGCCGATGACATTCAATCGCAAGATGGCGCAGTGGACGGCAGCCGCATTGGCCATCACCTGCCTGCAGGTGACCAACGCGAACGCACAGACCTTGAACATACCGCTCGGCACACCCGACGGATTCTCCGCATCATCGATCAAGAACGTGGGCCAGGACCGCTATTGCATCAGCGGCCGCGTGTACGACGACGCGGGGCCGAGCAACACGGCGATGGCCGTGCTGGTGGACGCCCGGCATCGTACCGTGTCGTGGAAGACCTCGATCCCGCATCCACGAGACTACGTCGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //