Array 1 35019-35230 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAMG01000021.1 Lactobacillus kefiranofaciens subsp. kefiranofaciens DSM 5016 = JCM 6985, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 35019 29 100.0 32 ............................. GGGTGGGCAGTGGTAGGAAAAATTAAATAGCT 35080 29 100.0 32 ............................. CGAATGGGATCTAAAAGGCCCAAGCCTTGAAG 35141 29 100.0 32 ............................. TGATATTGACACTACCAATTACAAGTATGTCG 35202 29 96.6 0 G............................ | ========== ====== ====== ====== ============================= ================================ ================== 4 29 99.2 32 AGGATCACCTCCACATACGTGGAGAACAC # Left flank : CAGCCGAAAATGTGTCCTGGCTTAAAAATCTAGGTGTCAAATTCAAGGGTGTCGCTACCTTAGGTTCAGGACTTAATACCTGGCATATGTTTAATGGTTTAGGTCGTCATGCAATTCACGATGCACTTGAGCCTTACGCTAAAAAACACAATGTTGAATATATAACTTCAGCTACGGTAACTAAACTTAATCAAGATAGCTCTGACAAGATCACCGGTATAACTATTCAAGATTTTGAAACTAAAAAGGCGAAGAATATCGCAACTAAAGCAGTTATCCTGGCAACTGGTGGATATTTAAATAACCGTGAGATGCTAACTAAATATTTCAACTCTAATTCTAATCGAATTGTACCAATGAACTCTGGTAAAAGCGGTGGCTCAGGACTTAAACTTGCTTGGGCAACCGGTGCTAAAAAATTTAATTTAGGAATGGCTATGATGTTCGGTGGACAAATTAAAGAAGATAAGATTCCATCTTACAAATATTGGAAGACTGAT # Right flank : CACTAAAAGATCCTTGATCTATCAACATTTCTAAATTCTTAGAAGCTCATTTTTATTCAGTTTAGTCAGAATAAAATGAATCCTAGCATTTTTCCCTTTAATTATATCATGCTACCATCATGTACTTAACATCCAAAAAAGGATACCCATCAGGAAAATACATTCCTAATTGAATATCCTTCAATCCTTTTAATTTTTTATCCTGCGAAGCAATTTTATCTAATCAAAGATCCTCACCATTTGAAAGGTAATCCAATAATTTACCTCGTCTTTATAACGAATAAAAATGCAAGAAAAAAGCCTATTGATCTTAGAACTATCAATAGGCAAGCTCAAAAATTTAGTGACTATCTAACCATCCTTTAATACTTTAGCTATGAAATTCAATTTTTGATAAATTGAAGAAACTTTTCCATTTAGAGCAAAAAACATCAAAGTTTAGTTCGATAAATGTTTAGTTCGATAAATTTTTCTAGCTTTTTTAATTCTTTATCAGAAAT # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGGATCACCTCCACATACGTGGAGAACAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.70,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 50360-50632 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAMG01000014.1 Lactobacillus kefiranofaciens subsp. kefiranofaciens DSM 5016 = JCM 6985, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 50360 29 93.1 32 ..A...........G.............. GACCTCATGGGAATACGGCTCAGTTCTTGAAA 50421 29 100.0 32 ............................. GAATAGCTTAGAAAAAGCACAGCATTAGTTAG 50482 29 100.0 32 ............................. TGAAGTTGATCAGACACAGTACAGTCATTTAG 50543 29 100.0 32 ............................. CAATGAAGTTACGCGCTATACTGATTTTATTC 50604 29 82.8 0 .......................TTCTA. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 95.2 32 GTGTTCTCCACGTATGTGGAGGTGATCCT # Left flank : GCTTATAATAAATATAGTCAATTATGGCATAGTATGTATCAAAGTAAAAAGGTAACTAAAGAAGCAATGGAAGCAGCACTTAATACTTTCATGCCGCTATATGAAAAGGCCCCACAAGAAATGCTAGTGGTTGATTCAATGGTTGATAGTTCTCTTGCTGCAATGCAATTTATGCTAGTTGCTCGTGAGCATGGCTATGAAACTAATGCAATGGCTGGATATGATGCTAAGAAGGCGGCAATTGTAATGGGGCTTGATCCTAAACAATATGTTCCAGTAATGGCAATTGCTATTGGTAAGCATGATCCAAAGGCTGAAGCAGAAATTACTACTACTAGATATTCTCTTGCTGATCTTGTTGATTATCAATAAAGTTTTGGAGTAGATTTTAAGTATTCTGTGTAGGGAATTGTAAATTAAGTTAATAATCTAGTTTAGAAAGTGAATAAAAATAAGAGTTTAGCTTTTCAGAAATGGCTTGATTACAAGGATTTTTTACT # Right flank : TTCACATAAAAATATCCTCGACTGTAACACTGTAACTGTCGAGGATGTTCATTCTATCGGTCTTTGCTATCTATTAATTTGTAAAATGTCTTCCTTAGCATGAATCAGTTCAGTGACAAACTGGCAATATGGCGTAGCTACACTGTGTTTTAACCCTTTGCGCCAAACTGCACCATCAATATAATCGATTTCAGTTGGTCGATGGTTTTGAATTAAATCTTGATACATTGAAGGATAATGTGGAGTATCAAATAGGCTTTCTACATGTCTAATAACCTCGGCACGATCTAGATTGACGCTTCATACTGAGCGATATCAGCGAATTCTTGTACAATATGTCTAGTTAAAGTATCCGCTTCATTGGTATGACCATATTCTTTGCAACTAGCTCCCAGCAATGCGCATAAGGCATTAACTACACCGTTAACACAAGCTTTACGCCATATAGAATACATTACGTTTTCGCTATAACTTGCGTTTAAACCGGCATCATCTAAGAT # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCTCCACGTATGTGGAGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.40,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //