Array 1 128478-125084 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAORS010000002.1 Acinetobacter baumannii strain SP5394 2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 128477 30 96.7 30 .............................G TTGGCGGTGGTGGTGGCGGAACTACCGATG 128417 30 93.3 30 ............................GA TGTTAAGCCTGTTGTTGATGCTATTGAGAA 128357 30 96.7 30 .............................A GATGGTTAACGTTATTAGAAAAACATCGTC 128297 30 93.3 30 ............................GA TCGCTGTAACCATTGCAGTACCATCAGTTT 128237 30 93.3 30 ............................AG ATTGCGGACATTTAGTCTGCTGTATTTCTT 128177 30 93.3 31 ............................AA ATAATCATCATATACCCCCTTGTCAGAGTGT 128116 30 100.0 30 .............................. TAGCTTTAAAAACTCTTCGCGAGATTAAAT 128056 30 100.0 30 .............................. TGGCTGCAAGCGGAACCATAATCCATGCAG 127996 30 93.3 30 ............................AG TCGGCACAGGTAGCAGTTGAGCAGTCATCG 127936 30 93.3 30 ............................GA GTTCTTTCATAACGTAGGCTTTAATGCCTG 127876 30 93.3 30 ............................AA CGTTTCCGCAAATCTGCGAAATACTCGTTG 127816 30 93.3 30 ............................AA TATAGTGGCATCTTCGAGAGTTAAAGGCGG 127756 30 96.7 30 ............................A. CAGAATTTTGTTTACAAGTTCTAAGCGGGA 127696 30 93.3 30 ............................AG TTTGAACATCTAATAATTGAGCTGTAATAC 127636 30 93.3 30 ............................GC CTCCAATTGATCCAATTGATCAACCTCCAT 127576 30 96.7 30 ............................A. ATGGTGGTTGTTATAAACCGCCTAATGATA 127516 30 96.7 30 ............................A. TAGAAGACGTGGACTCCCCCAACCTTTCAA 127456 30 100.0 30 .............................. TGCGCTCTTGCGGTTATTATCAAAGACCTC 127396 30 93.3 30 ............................AG CATGTGCTAAATCAGGGAAAAGAAAAGCCA 127336 30 96.7 30 .............................A ATTATAATCGCAATAGCTTCAATACTCCTA 127276 30 93.3 30 ............................AG TGCGTGAACATTATTCTTTCTGCATCAGCT 127216 30 93.3 30 ............................CG GTACGTTCAACGGTCAGCAGATTTGTGTTA 127156 30 96.7 30 ............................A. TAATAGTAATCGTAGTGGCGGTGTGTCAAT 127096 30 100.0 30 .............................. AACTTGCTTACGGCCAACACCTGTAATCAA 127036 30 93.3 30 ............................AG CCAACTTAATAGTAGAAAGGTAATGCCCTT 126976 30 96.7 30 .............................A CCAAACCAATCAGCAATGGAAAAACCACCG 126916 30 96.7 30 .............................A TAAAACGCGCAAAAAAATATAAGGGACGTA 126856 30 100.0 30 .............................. AAACTGATTTACAAGCTTGATCAGTAGGCC 126796 30 96.7 30 ............................A. CATGAAGCTTATTAAATGACTGACATGGCT 126736 30 93.3 30 ............................AA AGATTCTAGCCCCCTCAATTGAGAAGTTAT 126676 30 96.7 30 .............................A TTTAGAAAGCTTGGAAAATAAAGGTGACTG 126616 30 100.0 31 .............................. TGCCGATGCGTGCAAACATTTGCTCCGCTTC 126555 30 100.0 30 .............................. ATAGATGGCTTTAACTGACTCCCAGCCCAT 126495 30 96.7 30 .............................A TAAGAAAAATGCAAAAAAGGCATTTATTAG 126435 30 96.7 30 ............................A. ACACATGTTTTTCTAATAAGAATAAGACAA 126375 30 100.0 31 .............................. ACCAGATAGCAACTCTCTAGGTCAGATAGAC 126314 30 93.3 30 ............................CC AGACTTGATTTTTATCACCATTGAAGAGTT 126254 30 96.7 30 .............................C AGGTAATAAAAAACCGCCCGAAGGCGGTAT 126194 30 96.7 30 .............................C AAAACGTATGGGTTATTGATGCTCAAGATT 126134 30 96.7 30 .............................C GTTGCTACGCGCCACGGCGCACCCATCGTT 126074 30 100.0 30 .............................. GAATCGGCCGCTTTGCGTATAAACACCACC 126014 30 96.7 30 .............................A AAATCACATCAGGGAAGTGAAGGCGAGCTA 125954 30 93.3 30 ............................GA GAATGATTTAAATTGCATTAAGCCTTTAAA 125894 30 96.7 30 .............................G GAAGTCATGAATGTAGGTGTTGAGGATGGC 125834 30 93.3 30 ............................AA TAGAATTAAAACCACGTTGATAATATAGGT 125774 30 93.3 30 ............................GA ATTGCACTTGCTAAGCCAATAATGCCAACT 125714 30 93.3 30 ............................GA CCCATAAATCAAACAAGCCAACATAATTGA 125654 30 100.0 30 .............................. CCTCAACTGACATTTCCAAATAGTAGAGGC 125594 30 96.7 30 ............................A. AAAGCGCACAACCCATTGATTTGTATTTTT 125534 30 93.3 30 ............................AG CAAATAGATCAACTGGTGCGCCCTGTGAAT 125474 30 93.3 30 ............................GA GATTCAAGTTTCACCGGATGGCACAAGTAA 125414 30 96.7 31 ............................G. AAAAAAGAGCATTTCCAGCAAAAATTGACGA 125353 30 100.0 30 .............................. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 125293 30 90.0 30 .......T....................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 125233 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 125173 30 86.7 30 A......A.........T..........A. TTTGATCTTTACTTATTCTCGCTTCAAACA 125113 30 73.3 0 .......A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 57 30 95.2 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAACC # Questionable array : NO Score: 5.26 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.24, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //