Array 1 521086-518994 **** Predicted by CRISPRDetect 2.4 *** >NZ_RXEG01000001.1 Pseudomonas aeruginosa strain AUS177 IPC414_1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 521085 30 100.0 40 .............................. ATCCACGATTTTGACCGCATACCTAGAACGGTCACCCAGT 521015 30 100.0 37 .............................. ACTTACAGGCTATAGCAGGTCGGGTCACATGCCGCGT 520948 30 100.0 35 .............................. TCCCTCTAGCTGTGATTTCTACAGGAATGTCCGGT 520883 30 100.0 36 .............................. CGAGCAGTGGTGATAGCCTCCAGCGGTTGAATGCGT 520817 30 100.0 38 .............................. CTCGATGCGGCTGACCGGGTTTTCGATGGCCCATACGT 520749 30 100.0 37 .............................. CTTCATTGCGCACGCGAGTTTCCCCGAACTCAGCCGT 520682 30 100.0 36 .............................. ACCCCGCCTCGGACAATCCGCAGGTCATCTACCAGT 520616 30 100.0 36 .............................. CGGTGCCTCCTCAGAAAGCCCGGTTGCCCCCGGGGT 520550 30 100.0 37 .............................. GGCATGACGCGAGACGTAGCGCTCGCCATGGCCAAGT 520483 30 100.0 37 .............................. ATCTACGAACGCGCTGGGGTGATCTCCGATTCCGAGT 520416 30 100.0 36 .............................. ACATGCTGCTCAGTACCGAGCGACAACGATCCATGT 520350 30 100.0 36 .............................. CTTGAACTGTGGGAATCCATCAACGGCGATGGCAGT 520284 30 100.0 38 .............................. AGACTCGATCCACTCCCGACTCACCGACCGCCCTAGGT 520216 30 100.0 35 .............................. CGCGACACGATGCGGATCATGCAACCGAGTCTGGT 520151 30 100.0 37 .............................. GCCACCGCGTTCGTGGACCTGGCAGAGGTGGCGATGT 520084 30 100.0 36 .............................. ATGGAATCGGAGTTGGCCGGCTCTTTCTTTGACCGT 520018 30 100.0 37 .............................. GTCACCCGCGAAACCGAGGGTCGCCGAAACCTGGGGT 519951 30 100.0 36 .............................. GCCCTGCCGGTAGAGAAATTTTTCACTGCCGGAGGT 519885 30 100.0 36 .............................. CTTACAAGCTACGGCAGGTTGGGTCACAGCGCTGGT 519819 30 100.0 38 .............................. CGGTATTTGTTCCCGGATCGCAAGCAACGCAATATCGT 519751 30 100.0 36 .............................. ACTGGGTCGTCATCGACAGCCTGGGTGAGGTCATGT 519685 30 100.0 37 .............................. ACTGTCTACGGCTTTGCTGGCTTCGTTCCGGAGTGGT 519618 30 100.0 36 .............................. CCGGCGCCTCGGCATGCTGCTCGGTGGACAAGTAGT 519552 30 96.7 37 ..............A............... GACCAATCCCCGCGAAACGTGCAGTTGAGATCGAGGT 519485 30 100.0 37 .............................. AGCGACCGCGTACTGCGCCCGGCCATGAACAACCTGT 519418 30 100.0 35 .............................. TGCACCGAGTTACCGGGCTGCGCGTTCCACGCCGT 519353 30 100.0 35 .............................. TGGAACGAGTTGCGCGGCAACCCGGCCGACCCCGT 519288 30 100.0 37 .............................. ATATCGAGGTTGAGCGTTTAGACAGCCGAGAACGCGT 519221 30 96.7 35 ................A............. CAAACCGGCCAAGCGGTGTATCGAGTGCGATAGGT 519156 30 100.0 36 .............................. CAAAGCTGGACCCTGGCGCGGATCTGCATGTCTCGT 519090 30 100.0 37 .............................. CCGTCGCCGGTGATAACCGTGTTCGTGAATCTGGAGT 519023 30 83.3 0 .......TA.G............G.....G | ========== ====== ====== ====== ============================== ======================================== ================== 32 30 99.3 37 CGCGCCCCGCACGGGCGCGTGGATTGAAAC # Left flank : CATTTCTGTGGAAGTGAGGTGGCGACATGATGGTTCTGGTCAGCTATGACGTGAGCACTCAAGATGCTGCAGGTGGCAAGCGCTTGCGCCGCCTGGCCAAGGCCTGCCGCGATTATGGGCAGCGAGTGCAATACTCGGTGTTCGAGATCGAGGTGGATAGCGCGCAGTGGACATTCCTTAAGCATCGTCTGTGCAACCTAATCAATCCGGAACAAGACAGTCTACGTTTCTACTACTTGGGTACGAACTGGCAGCATCGTGTGGAGCATGTTGGGGCCAAGGTTGTACTCGACCTTAATGGCCCGCTGATTCTTTAGCGCCGGCGCGAACCTAAAGCGACCGACCAAACCCTGGGGGGTTCGCAACTCTCTAGCTGATTGATTTATATACTCTTTCTTTGAAGTTAGGAGTTTGAAGGCGCGCGCCTTGCTTAAAGAAGGCATGTTTCGCTGAAGTAAAAGGTTTTTTTCATGCTGATCAATAAGTTATAAGAGGGCGGT # Right flank : ATAGATTTTTGGGAGTTTGTCCTGAAAAGTTTTGTCTCGCCACTCTCTTCCCGGCCCAGAGTCTGGCCAGCAACTCTTGTGTCACGGTGTCGCGGCCCCAGGCCGAAAGAAAGACCAGGTTGCGCTGCTCGTCGCACACGCAGGCGTCGACGTATAGGTCTGGGCACTCTTCGATCTGGTAGAGCGGGGTGGGACTGGGCATAGAAACCTCCTGGAAGGAGGAGCCACGCCGCCCTCGAGGGGCGGTGAAGCCCCTCGGGGGTGTAGTCCAACTGGTGCAGGGGAGCGTGGTGGTTACCGAACGCTCTTGGTGTGAAGGTCGAAGCTCAGCCCATCGTCTTGGTGCAGCGGCCCTTGGCCGTTCAGGAAGACCTGGCAGAGGTACTGATCGCGTAGCGCGACAGCCGCTTCCGCCTGCTCCAAGGTCAGCGACAGCTCCTCGATGAACAGGTCGATGAGCTCGTCGTCGCCGGCGACGTCGTTGTTGGACTGTTGGTCCT # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCGCCCCGCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //