Array 1 7713-9928 **** Predicted by CRISPRDetect 2.4 *** >NZ_WDOY01000014.1 Bifidobacterium bifidum strain BIOML-A24 scaffold14_size10128, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 7713 36 100.0 30 .................................... CGGTGTCGTCCTCGTCGAGTTGTTCTTTTT 7779 36 100.0 30 .................................... CCTATGTACGTAGGCCTGATCGTTCCATCG 7845 36 100.0 30 .................................... TGAACTGAGCTGTGTACTGGCCGCGCGTTT 7911 36 100.0 30 .................................... TGGCCGTACCGTCATTGTCGATGGATGTAT 7977 36 100.0 30 .................................... CGAGCATCGTCGCCGTCTTCTCGAGTTGCT 8043 36 100.0 30 .................................... GTTTGACATGTGCGGTGTTGTGTGCTACGT 8109 36 100.0 30 .................................... CCCGCCAGATCTCACGGGCGGCGTCACATT 8175 36 100.0 31 .................................... TCCGGCATTCGCGTTGTAATGCTCTTGCGTA 8242 36 100.0 30 .................................... GAGCTAATCGGAGAGGATTCTCAGGAGATG 8308 36 100.0 30 .................................... CCGCGTTGCGATGCATAGGACGTTCCGCGC 8374 36 100.0 30 .................................... CAGCTTTGGTGGTGCGTGGACTTATCTCGC 8440 36 100.0 30 .................................... GCGCGTCCAGTAATTCCACGTCGCTCACAT 8506 36 100.0 31 .................................... TCAGGGATATCCTCATCTGATCGTAGCCTGT 8573 36 100.0 30 .................................... GCAAATATCGTCCAGTTGTTCGGTACACGT 8639 36 100.0 30 .................................... AGAACGTCGTTGCGGCGAAACCCTTCATCT 8705 36 100.0 30 .................................... CGTAGGCATGGGATTGTTCGCGGTAGCGTT 8771 36 100.0 30 .................................... CATCACACGGCACCCTCGAAGGCGAGAGCA 8837 36 100.0 30 .................................... TTTGACGACGCCGAGCGTGGTCGCGGTCGC 8903 36 100.0 30 .................................... CGCGGTGAAATTCCCGTGGCAAGACTAGTC 8969 36 100.0 30 .................................... GAATTCTCAGCACTTTCCGAAGGCTTATCA 9035 36 100.0 30 .................................... TGCCGTTACAATCGAACCCAGCTAAAGACG 9101 36 100.0 30 .................................... GCGATGCGGACACATGGCATAAAATGCGCA 9167 36 100.0 30 .................................... TTTCCACTGTTGTTGTGTTGTGTGTTGTGT 9233 36 100.0 30 .................................... TAAGCCAAATCGGACTACCGCCGTCAACGT 9299 36 100.0 30 .................................... TTGTGGTGATGTTATTGCAGCCGAAATACA 9365 36 100.0 30 .................................... CAACAATCTCAACGGCATGGCCAGCATTGT 9431 36 100.0 30 .................................... TTTGACGCACCGCTAACAATTTCGGACTGC 9497 36 100.0 30 .................................... TGACGTGACGTTTGGTAGCTGCTATGTGAC 9563 36 100.0 31 .................................... TACAGCAGCAGAAAAAGAAGAGCACGTATGT 9630 36 100.0 29 .................................... TCGATTCACCACAATAAACCAGATATGTA 9695 36 100.0 30 .................................... AAGTCGGTGATCGCCGCCGCTGGGGTGAGT 9761 36 100.0 30 .................................... AAACTCACGCCGCTTAACTTGGCCTGCTGG 9827 36 100.0 30 .................................... TCATGTCTAACTATATTCGTGGTTAGATAT 9893 36 97.2 0 ...................................A | ========== ====== ====== ====== ==================================== =============================== ================== 34 36 99.9 30 GTTTCAGATGCCTGTCAGATCAATGACTTTGACCAC # Left flank : ATTGCGCGGATGAAGTGGATTATAATGCTTTGTTCCAGAAGCTTGCTGTCAAGAAAATAATCGAAGGATTTACGCCGGAGCAAATCAGTAGATTATTGTCTTTGCAGGCTGAGTTAAAAACAATTATTCAAGATGAGATATGGGGTCAAAATCTACCTCTGACTATTCCCTGCGATTTGGATTTGAAAGCAGCAATTGCAATGGCCAAACCTCGGATTGACACGAGTTCTTTGGGATCCTTGTATGATAAAATTTCGACGGCAGTAGATACTGCCGGTGCTCTTGCCGAGAGCAGGATGCTGGTGACGCTTCATACAACTCAATACTGTGATAACGACCAATTACTTTATCTGCACCGTACTTTATTGCGGTACCAGTTGCAGCTTCTTGACCTGGAATGCTGCAGCAAGAAAGTCATGCTGACAGAGGGGATGAGCCACTATGTCGATGAGGATTACGTTCAGTTCTCATGAACTGTTCAGGAATCCTTAAGGCTATCG # Right flank : GTGATGCGCAATAGTGTTAGGGGCACCTCTGTTGCTGTCTTCTGGATAGCTTCCGGGGTGTGCTTTTGATTCTGGTGACATATGGGAAACGATTGATGCACAATATTCGGACTGTTATAGTGATGTGTTTTGTCAAGTTGTTATAGGCCAGTGTGGCGTGAGTTTTCCTTCCGAAAAAGCGGTAGGTTTTAGTCCAGTTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGATGCCTGTCAGATCAATGACTTTGACCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.70,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //