Array 1 1776-161 **** Predicted by CRISPRDetect 2.4 *** >NZ_BGFL01000034.1 Escherichia coli strain OU-NP031 sequence034, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1775 29 100.0 32 ............................. GCATTGACGCTTTAAACGACGACGGACGCCAC 1714 29 100.0 32 ............................. AAAACAGCCTTTAGATTAGTACCTGACGACCG 1653 29 100.0 32 ............................. TAAACGCACCTGGCGCGCCACTTTATCAACAA 1592 29 100.0 32 ............................. CGGCTTGTTTAATTGCGTGGAACGTCTCAATT 1531 29 100.0 32 ............................. ACGGCGTGGATTGAGGGACGGGTATTTGGTCC 1470 29 96.6 32 ............................T AGATCGCGCCACGAGGAAACGAATATGAACGG 1409 29 100.0 32 ............................. GTCTGTGATGGCCTGCTCGTGAGTCCGCGGCG 1348 29 100.0 32 ............................. TTTTGATTTCATTAACGGCGCTCCCCATATTT 1287 29 100.0 32 ............................. TGCGCCGTAGCGTGTCCACCTATTGTAGTAAA 1226 29 100.0 32 ............................. ATACAAACGCGGTGTTTATCAATATGAATTTT 1165 29 100.0 32 ............................. GCACCACGCGTACCCCGATGTTTGTTTTGCCA 1104 29 100.0 32 ............................. ATCCGGCTATATCTTTGAGCATTACAGAAATA 1043 29 100.0 32 ............................. CTATTGCTTTCGTACAGATTTTCAGTGGTGCT 982 29 100.0 32 ............................. AAAATTCTGTGTTTCGACCATTACTTCGGTAA 921 29 100.0 32 ............................. ATTCTTGATCACGCTTTTACCGAAGTAATGGT 860 29 100.0 32 ............................. GGGGTAGAATTATTCTTCGTGAGCGATTTATC 799 29 100.0 32 ............................. CGGCGTTCCGTGCGGCAATTGGAATCACACCA 738 29 100.0 32 ............................. CGTTCTGAATCCGATATTCTTCAGCACCTTCA 677 29 100.0 32 ............................. AGCGTCAATCAGCGCGTCTATCGCGTCACTTT 616 29 100.0 32 ............................. ATTTGGGGGTATGAGAGCGCCGAGCCGTTCGG 555 29 100.0 32 ............................. GCTCCCTGTCAGTTGTAATCGATAACGTTGAT 494 29 100.0 32 ............................. ATGTAGGGGCAATCGAACGATTCTCTGCCGAC 433 29 100.0 32 ............................. CCGAGCCCGATTATCGGCATGAGCGATGCGGA 372 29 100.0 32 ............................. TCGAAGAAGAAAGGGAAATAATGCGAGGAACG 311 29 100.0 32 ............................. TATTACGCGCCAGCAATGCTGACAGCGGCAAA 250 29 100.0 32 ............................. CGCGAGAGCCAGCAAAACGCCAGGGCACAAAA 189 29 93.1 0 .A..........................A | ========== ====== ====== ====== ============================= ================================ ================== 27 29 99.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTATTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTACTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA # Right flank : ACCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACCCCTCATGTTCAAAATAGTTCTCCATGCCAGAGAAGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //