Array 1 94176-93597 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018619.1 Vibrio azureus strain LC2-005 plasmid unnamed2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 94175 28 100.0 33 ............................ CTGCGATGGTAAGATAGATGGCAAAGAGGCTTA 94114 28 100.0 33 ............................ TGAGAGAAAGCTCATTTCTGATACTAATGCGTT 94053 28 100.0 33 ............................ TGAGATCGACGGTCAAGAGCTTTTTGCACCCAA 93992 28 100.0 33 ............................ CCTTTTGCTTTTCGTTGTACCCGGCAAGGTCTG 93931 28 100.0 33 ............................ CTTCTGGGACGGCTCATATGGCGAGAAGTTTGA 93870 28 100.0 33 ............................ TGGGTACTTAATCAGAGCCGATCTCGCGGCTAA 93809 28 100.0 33 ............................ CTCTGCATAGCCTAGCTTCGCCAGCAGAGTATC 93748 28 100.0 33 ............................ TGTGTCTGATGCTAAGGTTTATCTGGGCATGGA 93687 28 100.0 35 ............................ CGTTATCCAGATCTATGATTGGAAAGACTTATTTT 93624 28 85.7 0 .........G.A.T............G. | ========== ====== ====== ====== ============================ =================================== ================== 10 28 98.6 33 GTCTTCCCCACGCACGTGGGGGTGTTTC # Left flank : TAAAGAAGAATTAACGATTGATCTTGCATTTTCGCTGACACGAAAAATGGCGGGGCAGTATGATAAATATGTCGTTTCCAATGCATTCAGAGAAAGGGTTATAGAAATGGATATACTCCAGCGTGTTGGTAGGGATATCAGCGAATTTATGGGTATAGAGGAATGTTAGTGGTGATTGCAAATGATTTGCCTCCTGCCGTTCGTGGCCGCATGAAACTTTGGTTTGTAGAAGCAAAGCCGAATGTTTTTGTTTCAGGCCTAAAAGATTCGGTTGCCAATAAGGTTGTAGATTATCTGTTCCAACACTGCCCATCTCAAGCTGGGTTGACGATATTCAAAAGTATAAATAAGCCTCCAGGGTATGAGATAAGGACATTGGGTGAAACCAAGAGGTCACTCATTAACCTCTCAGGCTTGTTTTTGGTTTCTGAAAAGACCGTTAGTTAATCATTAAACACATCATATGGTGTTTTACTTGTGCTCTTTTACAATATGTTGGT # Right flank : TAAACATCACAACTTGCCAGATTTTAACTTTAAAATATAAAGCAGACGTGATTAACCCTCACGCTCAGCTTTCATTTTCTTAACTACACGCACAACCGTTCTGGCAGAGACGCCAATCATCTTGGCCGTTTCGTTGATGCTCATTTGGTTATCGACTCTTAACTTGTAGATTTTTTCATGCAGTTCTAGGTCAGGTTTCCTCCCTTTGTATTTCCCTTCGTTCATGGCCTTCTCGATGCCTTGCTTTTGGCGGCGGCGTCTATCTTCATAATCTTTTCTAGATATCGCGGCCAACATGTCCATCATCATGTTGTTGATGGCCTTGATCATCGAGTTGGTGAATTCATCAGAAATTTCTGGAGCCAGGGCAATATGACTGGTAGGTAAATCCAGGCTAATGACTTTCAATTCCTTCTTGTACAGCATTTCTTTTAATTTAGACCAACTAGCTTCATTTAAACGTGAAAGGCGGTCTATCTGCTCAATGATGATCACATCTC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCACGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 103390-102752 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018619.1 Vibrio azureus strain LC2-005 plasmid unnamed2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 103389 28 100.0 33 ............................ TGGATATATTGAGAAATACACTAGAGCTGACAC 103328 28 100.0 33 ............................ CTGGTGCGGTGGTTCAATTACTCGCAATGAAGG 103267 28 100.0 33 ............................ CTTGATAGCGATTTTATATGCAGCCAAGTCGTT 103206 28 100.0 33 ............................ TGTGCAGTCTGCTGGTAAGGTTTTTGTTAATGA 103145 28 100.0 33 ............................ TTAGCTTTTCAACATCATGCGATGTACTAGGGA 103084 28 100.0 33 ............................ CAAAGACTCTAACCCTATGATCGAATCAATCTC 103023 28 100.0 33 ............................ CGGCCCAATGATCATAAGCGATACGCTTGAAGT 102962 28 100.0 33 ............................ CTGGTCCGAGGGCGAAAATTACGTCGCATATCC 102901 28 100.0 33 ............................ CATTGCTGATATCTGGGAATGGGACGACAAGAA 102840 28 92.9 32 ............C.T............. TGCGTTGTAATTTAATTTTATCAAGTCACGGT 102780 28 82.1 0 AC..........A.T............T | C [102755] ========== ====== ====== ====== ============================ ================================= ================== 11 28 97.7 33 GTCTTCCCCACGTACGTGGGGGTGTTTC # Left flank : TTTGCAGGAGTAACAAATGCTTTAATGTCGTTCATCTATTCTAGCGGACTGGGATTTTTAATTTGGTTCGGCCTTGTCTTTGCATTATTTTTCATTTGCGAAATGATTAAAAGTGCGAGAAGTCGTTCAGAAAGTGGGGAGTTATTGATCGTGAAGAACTTGAAACTCTTAGTTTCTTGGTATTGCTCTATAACGAAGAAGCAACGAAATATCATTTGGATTTCGGCGCTAATTATTTGTGCAATACCAATTGTAGGATGGATGTTTGTTACTCCTTGGCTAATACCGTTGATGTTGTTTTTAGAGTACAAGCGCTCCTAATGAGGCTTTGCTCATAAAAAATAAGAATAAGTGTCGCGCAGTCGACACTTTATCTGGGTGTTGGACAAGCTCGCCCTTTATTAAGTCAATTCAAATCTGTAGGTGTATGTAAAAATAGATTGAAAATGATTAACCACAATATATAGTGTTTTATTGATGCTCATTTTCAATATCTTGGT # Right flank : CTAGAGAGCGAGATGAACCTTCCTTTTCTTGTGCTGTAAAAGTGGCGGAACGGCTTAAGAAAATCTTCAGTAATTTATTTTAAGTTGCGGGGGGCGTTCTGATTAAATAATTATTCAATTAATTCTGAGGTGAAAATAAATTATTAATTTATATAACAATGGCTTATTGGTGTTTTCATGATGTTTGTTAAGTTTATTTAATACGTTTCGCTGTATGTTTTGTAGCAGTGTATCGTTTGTTTTTATTGCCAATTGAACGGCCGATAGATAAATAAAGATACATTTTATCTAATAGTAAAGCGTACATACTGTTTGCAACCAATTTTTCCTTTTGAGGGGGTGAGTTCGTCAATGAGGCGCAGAAAAATAAATACATTATCGCAAGTGCCTTTAGTCCCCTACGCTGAATGTCCAGCAAAAACCTTTACTGATAAATATGGTCAAGTGTGTTTAGGTCGGAGTGTGTTTAATCATTGCCAAATTGTTGGACATATTGCTAG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGTACGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //