Array 1 328496-330232 **** Predicted by CRISPRDetect 2.4 *** >NZ_QEQC01000003.1 Aggregatibacter aphrophilus strain C2010020251 C2010020251_S32_ctg_742, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =============================================================== ================== 328496 32 100.0 34 ................................ TTTAACTTCACCAGTATCACGATTCGTAAAAGAA 328562 32 100.0 35 ................................ TTGGATAATGCGGATTTCTTCGAGGGCGTCATAAG 328629 32 100.0 33 ................................ TACATAAGTACGAATGAAAACTTGCTTTTGAAT 328694 32 100.0 33 ................................ ATCCAAAATCAGAAAATACCTATTTTTACTGTA 328759 32 100.0 34 ................................ CTATAATTTCCTATAATTGGATGCCATTACAAAT 328825 32 100.0 36 ................................ TAACAGATACTAGGTGCTAACGCACCCACCACGGGC 328893 32 100.0 34 ................................ ATTAATCCTGAAGGTGTATTAAAATTCCGATTAC 328959 32 100.0 38 ................................ CACGGTCACACCCAGTTTGCCAAGCAACTGCTTTAACA 329029 32 100.0 35 ................................ CGTCAGTATCAATCACAAAGTGGTAGCCGATAGAG 329096 32 100.0 36 ................................ GCCATAGTGACATCCACTTGGATGCGCTGTTGGAAG 329164 32 100.0 34 ................................ CATTGCCTAGGGCGACTGCACCCGGGCCGCTTGC 329230 32 100.0 37 ................................ AATTATAGTGCTTCTACACGCTCTCTTGCCACGCCAA 329299 32 100.0 35 ................................ CATAATTTTTCAAAGCCGTAATTAATTCTTTCATT 329366 32 100.0 35 ................................ AATCTGTTGTAACAATTCAGGATGTGCTATATCAA 329433 32 100.0 36 ................................ TTTTGTCTTGTTCCTGTTGTGTTTTCTTTTTGCAGG 329501 32 100.0 37 ................................ CAATTGCCCAATAGCAGCATATTGCTCAATGTACTGT 329570 32 100.0 36 ................................ CCGATTTATCCCACAAAAATGATAACCCTAATTTTT 329638 32 100.0 35 ................................ CGCAATTATTCGTGCAATTAACTTTAGTAATTCAC 329705 32 100.0 36 ................................ TAATATCTTTGATGCAGAGTTAGAAAAACGTATTCA 329773 32 100.0 36 ................................ ATTATTATCAGCAAAAGTTAAGGAGGGCTGTTATGG 329841 32 100.0 34 ................................ AGAAAATGAATAGGCGTTATATCTTTTAAAGTAA 329907 32 100.0 36 ................................ TCTTTAAAGCTTTAAATTTGGCGGTTTTCCATGCTT 329975 32 100.0 33 ................................ CATCCAACCTGCGCTTGGTGCTTCTTTGCCGTT 330040 32 100.0 36 ................................ ATTGCGTCTAAAAATGCTTGCGCGTCTTCTCTTGTC 330108 32 93.8 63 ..........T..G.................. AGATGTTTAAGTGTTGGTACAGGCAGACTGTGTGTTGAAACGGCGATAAAGCGGCAGGTCGTG 330202 30 75.0 0 --...T.A.AAA....A............... | A [330207] ========== ====== ====== ====== ================================ =============================================================== ================== 26 32 98.8 36 GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC # Left flank : ACATGGAAATACAAAATGCTGATGCTGATTACTTACGATATTTCGCTGGAAGACGCGGAAGGACAGGCAAGGCTGCGGCGCGTGGCGAAGTTGTGTCTGGACTACGGCGTGCGCGTGCAATATTCGGTGTTCGAATGCGACATCGCGCCCGACCAGTGGGTTGTTTTAAAGGACAAACTCTTGAAAACCTACAACCCCGAAACCGACAGCCTGCGCTTTTACCATTTAGGCAGCAAATGGCGTAATAAAGTGGAACATCATGGGGCAAAACCGGCAGTGGATGTATTTAAAGACGTGCTTATCATTTAGTTCGCTAACCTGTTGTTCTCATCAAAACTCTGATGGGATAGCGATCCTTATTTTCTTTAACAATTTGGATGAATTAATCTATTTGTATAACGGCGATGCGGCCGTTATACTGAGTAAACTCCTTATCATAAAATCAGTTAGCGAAATACAGTGTTTAATCTGCTGATTTTTCTTGCTTTTTTATGTAGTGA # Right flank : ACAAGATGTCGAGCAAGTCGTGCTCATTTTGTGCGGTGGCAACCACCTTTGGGTGAGTATATATTTTGTCTTTACGAAAAATAAGTGATGTATAAGTTTCAAGCCTTTCTGCAAAAACGTCTGGAAAATCCACCGCACTTTTCTTTCATAAAAATAAAAAGCTGAACCTCTTTCGAGATTCAGCTTTTCTTTTTTGGTTAGATCATTTTAACCGCTCTTTTTATTTATCTACGCTGAAATATTGTTACATTTTCGGAATTTCAACGCCTGAAGAGAGCAGGTCTTGAATATCCGATTTCAGTACATCAGCTTTTGGCCCATAAATGGCTTGAATGCCAGTACCTTTAACAATGAAACCCATTGCGCCTGCTTGTTTCCAAGCTGCAGCATCGCCCACCAGCTCAGGGTTGTGAACGGTGATACGTAAACGGGTCATACAAGCATCCACCTCAGCAATATTGTTGCGTCCACCGAGAAGATTGATGATTTGCACCACTTGC # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //