Array 1 5139-47 **** Predicted by CRISPRDetect 2.4 *** >NZ_LKBH01000107.1 Acidiplasma cupricumulans strain BH2 Contig195, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 5138 30 100.0 36 .............................. AATTCCTCTATTATGATATTTTCCAAAACTTTTTTA 5072 30 100.0 37 .............................. GTTATGACCTTCAATGAGATACTGACGAGTTTTAGGA 5005 30 100.0 36 .............................. TATTTCCATTCCATTCATAGCTTTTGGAAATTTCCT 4939 30 100.0 37 .............................. ATTATTCTCCCTTGCAAACCTCGATGCAATGCTTTCA 4872 30 100.0 38 .............................. TTACATGCACATGGTATATATGAAGATGATTATGGAAA 4804 30 100.0 35 .............................. TCTCTGATTGGAAAAAAGGCTATTGGTGTTAGAAA 4739 30 100.0 37 .............................. AATATACTTTCTTTTGTTAACTGTATTAGGTAAAAAT 4672 30 100.0 37 .............................. TTTTCAAGCCAGACTATACCAGAAGACTGGCCATTCA 4605 30 100.0 36 .............................. AATGTTACCTTAAACCTAAAGTTTTACATGCACATG 4539 30 100.0 37 .............................. CTTTATTTTTCTATGTTTCCACTCAAATTTTATATTG 4472 30 100.0 40 .............................. GTAAGCAGTGAGGAAACTCCTTATTTTCCCCTTAATTCTG 4402 30 100.0 36 .............................. TATATAGCATTCGGGACAACTGAATACAACGCTTTA 4336 30 100.0 36 .............................. GTTCCTCAAATTGATAACCTATTCCGTTGATTTCCA 4270 30 100.0 37 .............................. TCCAGGACATTGACAAAAGAGACCTGGAATATTTCGA 4203 30 100.0 37 .............................. TCTGTTATATTCTGCATATCCTGGCTTACTGATACAG 4136 30 100.0 38 .............................. TATTTTAAAACATTTCTCCTGGTCTGGTTTGAATAATA 4068 30 100.0 37 .............................. TCCTTGTTTTTTTTCCTGGCTTCTCTTTTTTGGATAA 4001 30 100.0 32 .............................. AAAAAGAGCTCCGTAAGCTTAATCCATACATA 3939 30 100.0 39 .............................. GCCTATTGCATTTGTTATTCCTGCCGGCTCAGATTCAAA 3870 30 100.0 36 .............................. TGTTCCGTTGCCAGAGGGGACACCCGATAATGTCAA 3804 30 100.0 36 .............................. ATAGACGAGGAGACGCAAAACGAAGTGCTCCCTAAA 3738 30 100.0 36 .............................. AAGGAAGAACAGGCCATAAAGAAAGCAGATAAAAAA 3672 30 100.0 36 .............................. CTCTGTAGTTTTTGAAGAGTCAACATGGGCATAAAA 3606 30 100.0 36 .............................. TTCTATGGCATTGGTGCACCACAACCATGGATGGGC 3540 30 100.0 38 .............................. CATCTGGTTGGCTCAATATTATAGTAGAGAGCCTTTAG 3472 30 100.0 38 .............................. AAATAATGTTTTTAAAAGGTTTGAAAAATATAAAAATA 3404 30 100.0 39 .............................. ATTTCCTTCCAGGTACCTGCTCCTCATTTTCATTATCTT 3335 30 100.0 37 .............................. ATATTGTTTCAGGCAGGAATGAGCCGCTTGAATTGGC 3268 30 100.0 38 .............................. TTAATCTCATTCTTCACCTCATCGTTTATATACTCCCC 3200 30 100.0 35 .............................. ACAATTCCCTGAGCGATAACATTCCCATTTACACA 3135 30 100.0 35 .............................. TATTAACAGCTTTTTTCTCCCCGTTGGTTACCTTT 3070 30 100.0 34 .............................. GGGGTTCAACGGAAAATCCCCCCATACTACTAAA 3006 30 100.0 35 .............................. ATGATTTTTTATCTTCTTGCAATGCTGCTGGCTAT 2941 30 100.0 38 .............................. AGGTTTGCCGAGCCGGTTGTGGCTGTCGGCTTCGCTAT 2873 30 100.0 36 .............................. TATATTTTTGCCGTTGCCATTTTCAAAATATTTTAA 2807 30 100.0 34 .............................. AAGATAAATAACCATGCCCTCAAGGTGTTAAAAA 2743 30 100.0 38 .............................. GAATATGTGAAGTTCGCCATTGGGTTCAGGAATGGAAG 2675 30 100.0 38 .............................. TTAATTGGCAGATCAATGGTTGAAGTCCCTGAATTTGA 2607 30 100.0 35 .............................. TCCTTCCGGGAAAAACAGGATAGTCGCCATCGAAC 2542 30 100.0 37 .............................. TTTGGGATGGTTGCGCTGGCAATGTCCGCCACTGTTC 2475 30 100.0 37 .............................. CTCTTTGAGGAAGAAACGGGTTTTGCAGTTCTAAAAT 2408 30 100.0 38 .............................. CGAAAGGAAGGGGTACTCAAAGAAGAAGGCTGAGTATA 2340 30 100.0 36 .............................. TTTCACGGAAGTTTAAAAATATTGACCTTGAGATTA 2274 30 100.0 38 .............................. TTTTACCATTAGGACATAAAGGTTTTCATATGGCATAG 2206 30 100.0 36 .............................. CAGAAAGGAAGGACTTTGCAAAGCCAGTAGTTAAAA 2140 30 100.0 36 .............................. ACTGATGACTTTTGACAAGACAGCATGGCAGAGAGA 2074 30 100.0 38 .............................. AAGTAATGTTTTTAAAGGGTTTAAAGAGCATAAAAATA 2006 30 100.0 38 .............................. AAAAAATATTGCGGTGCATGACGCCATTTTAATCGATA 1938 30 100.0 36 .............................. GAAGCGTCTGCTGCCTTCTTTAGTCCCGGAATTATA 1872 30 100.0 37 .............................. TTAAAATTTAAATAATTTTTACCATTTCTTATAATTA 1805 30 100.0 37 .............................. ATTAATTCATTTGTAAGATTGGTATCTACTGTATTGA 1738 30 100.0 36 .............................. ATGTTCCACCTTCTAAAGTTCCAGGAACAATAACCA 1672 30 100.0 39 .............................. ATTTCTGAAGGTCATCTATTTTTTTAAATTCATCCTTTG 1603 30 100.0 36 .............................. ACAAATGCGTCATCTATTCTTATGGATGGTTTTTTT 1537 30 100.0 38 .............................. GCTTAAGGCTGCTGCTCCTAGTCCTATCACTGATAATA 1469 30 100.0 38 .............................. TCGAATATTCCTTTATATCTAAACTTGGAGAAATACAT 1401 30 100.0 36 .............................. TTTGTAGTTATGGCCGTTATCGTTGGTGGTGTTATA 1335 30 100.0 35 .............................. ATAAAAATGTCATTACATAGTGTTTTAGCAGATAA 1270 30 100.0 37 .............................. AGAAAAAACATGTTTGATGTGGCACAAATAGAGACAA 1203 30 100.0 34 .............................. GTTCGATGGCGACTATCCTGTTTTTCCCGGAAGG 1139 30 100.0 35 .............................. TTTTCAGATAAAGACATTATGGAAGCCCTACTCGA 1074 30 100.0 37 .............................. AAGGAATATACGATTTAGACAATATCACGGAAAATAA 1007 30 100.0 36 .............................. TCAGGCAAAGCAGACAATCAGGCAAATGTAGACTTA 941 30 100.0 38 .............................. GGGGGACTATTATATCCCTTATGTCTATGTTATTTAAA 873 30 100.0 38 .............................. TTCTTGAGATATTTCGCTCATAAAGTCTTTTGTCATGC 805 30 100.0 37 .............................. GTTACCATTCTGGAGATAGTGATTCTAAGGGCGACGG 738 30 100.0 38 .............................. ATTGATATGCAGGTATTCCCCTCTTTTGAAAGTTTCTT 670 30 100.0 35 .............................. ATGAATATGACAATGATAGCATTGACGAAATACAA 605 30 100.0 34 .............................. AATTATCAGCACCTTTCAGTTTCTGTGCTACTTC 541 30 100.0 35 .............................. GAATTAACATAAACAGAACCCCAGCCCCAGAAATG 476 30 100.0 35 .............................. AAGGTATCGTTACCGTAAACACCTATGCCCTTTGA 411 30 100.0 36 .............................. TTTCAGGATATCGGCATGGCTGGAGAGGATTTTATA 345 30 100.0 36 .............................. TCAGTCCTTATTCCGTCTTCAGTATCGCATTCTATA 279 30 100.0 39 .............................. GAATATCTGCTTGAGTTTGAACCTGAAATTGCAATGCCA 210 30 100.0 38 .............................. TTTCTAATCTTTCAAGATTTTTTAAAGATGTTTTATAA 142 30 100.0 36 .............................. AAATAAAATGCTGATACAGGTACACTTTACAAAAAA 76 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 77 30 100.0 37 GTTAAAATAGAACCTTAATAGGATTGAAAG # Left flank : GAGGGAAACTGTTTACGTTTCTTCCTTGAGAAGGAAAGTTTCTAATAAGTTTCTAATACGTCTTGAGATATATAAAGTTGAAAAACAGATAATGGAGAATAAACAATACAAACCATATATTATGAGGGATTAAATTGTGGATTATACTTACATATGATATTAATGAAAAAAGGGTTGATAAAATTAGAAAGATTTCATTGCAATATTTAATTAGGATTCAAAATTCTGTATTTATAGGAGATATTGGATGGGCAAGCTTAAGAATTTTAAAAGAAAGATTAAAAAAAGAAATTGTTGAATCAGAGGATTCAATACAGTTTTTTATTCTTAGGGATGAAAAGCTTGTAAAGAGAATAAAGCTTGGAGTGTCATATGAATTCAGCAATATAATTTAACATATGATCAAACCTTTAAATACTCTTTTCCAATTATGAACTTTGAGTACTTTTTTATAAAATTGTCATAAGTTTTTTATTTATAATACAGATTATCTATAACGG # Right flank : GGTTATGACCTTCAATGAGATACTGACGAGTTTTAGGAGTTAAAATA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATAGAACCTTAATAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : NA //