Array 1 412182-411013 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRQY01000010.1 Pseudomonas aeruginosa isolate 349, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 412181 28 100.0 32 ............................ TAGCTGATCAGCAGGCCGACAGTCAGGCCTGC 412121 28 100.0 32 ............................ TACCCGAATACGACTTGCGCGAGGAAGACGGT 412061 28 100.0 32 ............................ AGCATCGCATCAAATCGTGCAGAACACGATAA 412001 28 100.0 32 ............................ TGGTCGAGCAGTTCGGCAAAGGGGCCGTGGTT 411941 28 100.0 32 ............................ TTGCCAGGCCACCACTCCTCCCGGCCGTTGAC 411881 28 100.0 32 ............................ TTCACCTGGTCGCCGGCCAGGCTGATCACTGC 411821 28 100.0 32 ............................ GTAGACCTTCGCCGGGTACGCGCTACCGTTGA 411761 28 100.0 32 ............................ TACTGATCAACGGCGCACCCGGTGAGGGGCAC 411701 28 100.0 32 ............................ TTCTGGAACAGCGGGATACGCCGCGTCTCGAT 411641 28 100.0 32 ............................ GCCGGACGGTTTCCGCAGTCGTTGAACCCCTT 411581 28 100.0 32 ............................ TGGCCAAGCTGCGCGAAACCCTCGGCCTGGCC 411521 28 100.0 32 ............................ TGCCCGAATACGACTTGCGCGAGGAAGACGGT 411461 28 100.0 33 ............................ TACAAGGTCATGGCGCTCGGCAACGTGGTGGAA 411400 28 100.0 32 ............................ GCTGTGCGTCGCCGTGGTCTGACGGTCGAATC 411340 28 100.0 32 ............................ AGCAGATACCCGAACCACTGGAGGTACATGCA 411280 28 100.0 32 ............................ TTCATCAGGATGCCGCCAAGGGTCCGCATAAT 411220 28 100.0 32 ............................ ATGAAGGCCAGCAGGCCGAACACGATTGCGAT 411160 28 100.0 32 ............................ AGACAATCCGGACCTGCCGCCCAGGACGATCT 411100 28 100.0 32 ............................ TGCAGCGACTGCACCTTGGCTTGCTGCCGGTC 411040 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 20 28 100.0 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : GCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCCATCACAAGACCTTTCGCGCCCGAACGGCGAGGCTCACCGCCCGTCCCGGTCCTCGCGAAACGGCCTCCAATTGCCCGAAACTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCT # Right flank : CTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATGCACGAAGTGAGGCTTGCCCTCCGAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGACCAAGGCAGGCACAAAGAACAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGTCCCCCCTCACTGCCGTGTAGCTAAGAAGTCGCGAGCGATATAGTCCCGTAGGGCGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //