Array 1 529222-526228 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP043500.1 Xanthomonas translucens pv. undulosa strain P3 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 529221 31 100.0 34 ............................... AAGATCAACATCCCCGGTGCCAGCACCGATGTGC 529156 31 100.0 36 ............................... CTCTTCCGATGTTTCCTGCACGGAATTGCTCTGAGC 529089 31 100.0 33 ............................... TGCTGAGGCACGCGCGCCCATTCGACACCGGTT 529025 31 100.0 34 ............................... TCGTAATTGCTCTTGAACTGGCCGGGGTTGTGGA 528960 31 100.0 34 ............................... GGGCACCACTTCCAAGCGGCTCACGATTACCGGG 528895 31 100.0 34 ............................... AATCTGCCGGACATGCGCGGCGAGTTTATCCGCG 528830 31 100.0 35 ............................... AGGTCATCAACAATCACCGGCACCGCCTCCGGAAA 528764 31 100.0 35 ............................... TGCACGACCCGAAGTACGACGGAACCAGCACGTGC 528698 31 100.0 37 ............................... GACCCGAAATCTCCGGCGTACGCAATTGCATCCTGAG 528630 31 100.0 34 ............................... TGTTGATCCTTGTCGCGGCGGTCTGTCGTGCGCG 528565 31 100.0 35 ............................... ATGCGCTCGCTTGTGGCATGCCTGGCACAGCCAGG 528499 31 100.0 37 ............................... GAAAAGTACGGAATCCCCCATGGATTCGTGGCTGCAA 528431 31 100.0 36 ............................... AACAGAAACGCCTGCGTCTGTGCGAGTTGGCCTTGT 528364 31 100.0 35 ............................... AGGTACGTGATCGAGAATTGCTTGATCGTGTCCGA 528298 31 100.0 35 ............................... GCCGAGGACATGCCGTTCGGCGACCAGTCGCCGTA 528232 31 100.0 36 ............................... GCGGCGTACCGCAGCGGCGCGCAGCCGTCCTCGGCC 528165 31 100.0 35 ............................... TCGGCGTATTCGACGACCAAGCCCGTCGGGCCCAG 528099 31 100.0 35 ............................... TCACACCGGTGTGGGATTGACGTGTCGGTTATGGT 528033 31 100.0 34 ............................... TCGCACGGCGATTTCTTTGCGGTGGCCGATGCCA 527968 31 100.0 35 ............................... TGGTTGGCGATGCTGGATGTGGCCCCGGTCGAGGA 527902 31 100.0 37 ............................... CCGTAGGCGTAGAGCACCGACATGCCTCCGGCGTAGG 527834 31 96.8 36 ...............A............... CCGCCAAGGGTCAGGACAAGGCGCCGGCGCCGAGTC 527767 31 100.0 35 ............................... CATGTCGAGGGCGACCGCAAAGGGACGCGCAACGG 527701 31 100.0 34 ............................... ATCCCACATCATGAGCGATGTGGTCATCTCAAAA 527636 31 100.0 35 ............................... AATTTCCACATGACCCCCGAAGATGAGGATTCGAG 527570 31 100.0 35 ............................... TCGATGGCTTCCACGGTGCACTGAAAGCGGCGGGC 527504 31 100.0 35 ............................... TGCCGTGCTTGCACGCTGCTGTAAGTCCATCAGCG 527438 31 100.0 34 ............................... GGACACGCAGGGGACCATCCTCAAGATACTGGAC 527373 31 100.0 33 ............................... ACCACGGCAAAGCCGGCGAGCCGATGACAACTG 527309 31 100.0 34 ............................... TCCTTGACCGTGGACATTTTCGTCTTGCTTGCCC 527244 31 100.0 35 ............................... GTAATACCACACAAGTCAGCGCGGCGCCGGCAGAA 527178 31 100.0 34 ............................... TTTTGCACAGGGCGACAGCTTCCACTTAGACATC 527113 31 100.0 36 ............................... AAGTCCCAGGTGGCCTCGGCTTTAGGCGTGCCGCAG 527046 31 100.0 34 ............................... CAGGGGATGACGTGCGGGAAGTGTGCGAAATCAT 526981 31 100.0 35 ............................... TTGGCCTGGCGGACTGCCGCGTCGAACCGCCGCCG 526915 31 100.0 35 ............................... ATTGAACTCGCTGTGGCGTGCAACAACCGCCGCCC 526849 31 100.0 36 ............................... TTCCTGGACAACAACCCGGGCGTGGTGCTGGAAGAG 526782 31 100.0 35 ............................... TTGGATAGCCGCCAGATTGCTTCGGCGCGGCTGTC 526716 31 100.0 34 ............................... TACAACAAGGTGCTGAATATCGCCGGCATGGGGC 526651 31 100.0 34 ............................... CCGGATGGGCGCACTTGGGGCTACGACGTGGTGA 526586 31 100.0 34 ............................... GTACGCCTGCCGGAACCTCGGAAATTCCACGCCG 526521 31 100.0 34 ............................... TGGAACAGCGAGAAGCACCACACTCGCATGAGGC 526456 31 90.3 33 ............G................CA ACCGTAGGTTGACTGGTTGGCCTGCCAAATAAA 526392 31 100.0 35 ............................... TCGACCCAGGAGCCGAACGATGCGCTCGAGAGCCG 526326 31 90.3 36 ...............T....C..G....... ATGTATTTGTTCGAAGAACATGTTCTTGCCGGTGTC 526259 31 87.1 0 ......CG.......C.........C..... | G [526232] ========== ====== ====== ====== =============================== ===================================== ================== 46 31 99.2 35 GTCGCGTCCTCACGGGCGCGTGGATTGAAAC # Left flank : ATGAAAAGGCCGCCGCGCCATGATGGTTCTGATCAGCTACGATGTCAGCACGAGTTCCCCCGGCGGCGAAAAGCGACTGCGCAAAGTCGCCAAAGCCTGCCGTGATCTCGGCCAACGCGTGCAATTCTCGGTCTTCGAAATCGAGGTGGACCCTGCACAATGGGCCGCATTGCGGCAGCGCTTATGCGACCTGATCGATCCAGGCGTCGACAGCCTGCGCTTCTATCAGCTCGGCGCGAAATGGGAAGCCCGCGTGGAGCACGTCGGCGCCAAGCCCAGCCTGGACCTCAAAGGCCCACTGATCTTCTGACGCGAACCGCAAGCGACCGGGGAAAGCCGGGCAGGTTCGCGCAACAAACCAAGTCATTGATTTACAAGAAAAACACTAACCTCTTCCGCTCACTACAGGTCCGCGGCGGCCCAATTCGATTGCGTCTCCGAAGGGTTCCGCAAAAGTGCGGACTTTTTTCCAACACCCATCAGCACTTATGCTCAGGGCG # Right flank : TGGCCTGGCGACGATATGTCGTTCTATCGCCTTTGCCCACAAAAAATGGCGCAGTCTCGCGACTGCGCCCAGCGTGCCGCGCCGGCCGGGAGAGAGTCGGCTGGCGCGATCCGTGACTGCGGTGTGCTTAGCGGGACGCGATGCGCATCACTTGACTTCGAATTCCTGCACGGTCCCGGCCGGCTGACCGTTCACGGTGACCTCGGCCTTGTACTTGCCCGCCGGCCAGCCCTTGGCGTTGGTGAAGGAGATATTGGTGGTTTCCGCACCGGCCGTGGTCAGCGTCGCGCTCTGCTCGCCGGCGGTCTGGCCGTCCTGGAACAGCAGCTTGGCGCCGACATTGGTGGTGGTGGAGGAACCCTCGGTTTTCACCGAGACGATGATGGTGTCCTTGCTGCTCAGCGTGCTCAGCGGCGCCACCGTCTTGTCGGCGCCCGCACTGTTGCCCACGGTCACCGAGGCGACCGTCACCGTGCCGGCAGTGGCCGCGGCCGGCGCCG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGTCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGTCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //