Array 1 37819-36695 **** Predicted by CRISPRDetect 2.4 *** >NZ_RYUF01000012.1 Bifidobacterium pseudolongum subsp. globosum strain 2105B Contig_12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================ ================== 37818 36 100.0 28 .................................... GGAACGGGTCTCGTTGGAACAGTCATGT 37754 36 100.0 28 .................................... TGCTGGCAGCCGAGGGTGTGGCGGTGTG 37690 36 100.0 28 .................................... CGGCGAACTAAAACGAGAAATCCCACCC 37626 36 100.0 28 .................................... GATCACCGGCAACATCACGGGAGCCAGG 37562 36 100.0 28 .................................... GTGTGAGTCATGCATGACCATTGTGTGC 37498 36 100.0 28 .................................... AACCCGAGAAAACCATTCCCGCGAAGGA 37434 36 100.0 28 .................................... CACGCAATGCGCGGTGATCCATGCAGCC 37370 36 100.0 28 .................................... ACAATGACACATGGGAGGACGAAGCATG 37306 36 100.0 28 .................................... TCGCGGCGAGCAGGCTTTCTGTTGTGCG 37242 36 100.0 28 .................................... AGCGCATACGTGGCGAGTGGAATGTAGG 37178 36 100.0 28 .................................... CGTATTCGACGAGTGCGATGGATCCGCC 37114 36 100.0 28 .................................... TCAACGCCAAAAACGGTGTGCCCTCGCA 37050 36 100.0 28 .................................... TCATGTCGATGTTGGGAGGCGCGAAGTT 36986 36 100.0 28 .................................... GGTGGCAGTCGAGCGGATTGGCCGAAGA 36922 36 100.0 28 .................................... GCGAACCGAACAACAGTGTGTCGGTGCT 36858 36 100.0 28 .................................... ACGCGCTGCGCATCAACCAGACGCGCGC 36794 36 100.0 28 .................................... GCGGAGCATGTGGTCACGGCGATCGCGA 36730 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================ ================== 18 36 100.0 28 CAAGTCTATCAAGAAGGTAGGAAGCTAATTTCCAGC # Left flank : CTCAGTTCAATGGAGGGCTGACAATTCCCAGTTCCATTGACGAGTTTGCGCAGCAATTTGGCTTGTATTGCGAGTCAAAGGAGAGAGTATTGACAACTCCGATTTTTGGAGGACAGGATGAAAAAGGATGAGGAGAGTGGGGGAATGTGGTGCTTGGTGATGTTTGATTTGCCTGTGCAGACCAGGAATGAACGACGCGAGGCAACAGCGTTCAGGAATATGCTGATTGATATGGGTTATATGATGGTGCAGTTCTCCGTGTATGCGAGATATTCACCAACCCAATCGGGAAACCGATCCACGGTGAAAATGATTAAGCAGCATTTACCGTCCGGCGGGAAAGTACGGGTGGTGCATATTAGCGACCATCAATGGGCGCAATCTCTGCGTTTTGTCAACGAGGTTCCTCAAAACGATGTGGAGGCACCAGATGTCTGCACTGTTTTTTGAACATCTTTTTAATAAAAATCATTGGGAAACCTACCTTCTTGGCAGGCTAT # Right flank : ATGGGTCTACTTATCTCATGTGTCAAGGTTAGTTTATCAAAGAGCGAGCCAATTTGCAGACTCCCCTATCCCGTTGTCTCGATGAAAGTACAAGGCCCAATAGATTAGTAATTGTCCAGAAAACCAGTCCGAGGGGATTTTGACCTATGAGAATGATATATTCGCATCTGCTTAGAAGACCAATTGGCCATCCAGATTGATATCGGACACAGCACCGGCATAGGGGCAATAGGTGCGATGCTCGGGTGTAGCATATCCACCATCAGGAGGTAGATCAAGCGCGATATCTGGTTCCCGTTTAACGAGAGTGAGTCCTATTACCTAGGTCAAATGCCTCAAGACGGGTCTGTAGCCGGTCTATTGCATCGCTGGCCTCGCGCAATATAAGCGCAGACTGAAGCCGTGCAGCCGCAGGCGGTCGCATGGCTGGACTGTGGTCGCTTGCTGCTGCCGGTGTCATGGGCAGGCTGCGTGTCCTGTGGCCAGATGATCGGCTCATA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGTCTATCAAGAAGGTAGGAAGCTAATTTCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //