Array 1 214-619 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAECVW010000011.1 Thermoactinomyces intermedius strain CICC 10671=DSM 43846 NODE_11_length_63643_cov_3.233492, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 214 36 100.0 35 .................................... ATTTTGGTAGTGTTTTCGGATGTTTTTTCAACCGT 285 36 100.0 41 .................................... CCTAGTAGTTCGTCAACTTCCTTCTTTTGTTCGTCCGTTAG 362 36 100.0 36 .................................... TTATTAACAGGCTCACTGGTGTACTACCACTACACC 434 36 100.0 39 .................................... CTTCCAAACAAACAACTTTTCTGTATATAGCATAGTTCC 509 36 100.0 39 .................................... ACCCAAACCTCGTTCAGATCCTTACATCCCTGATACACT 584 36 94.4 0 .....................T.G............ | ========== ====== ====== ====== ==================================== ========================================= ================== 6 36 99.1 38 GTCAAAATGGTTACACCTCTTCTAGAGGATTGAAAC # Left flank : TTTTTGATGTTCATACAAGGATTTATCGAGCGCCTTGATATGTCAAAAATCCCCGGGGTTGCTCGTAAAAGCTGAAACCCGCATGAAATAAAGGAAAAAGCCACTTCGTTTTGACTTGATACATAAAAAATAACTTAAATGCTCTTTAAAAAACGAAGGTGCTCGAAAAACCATATTGAACCTCAAGCGTGTCAAGGGTTTCAGACGCATGCAG # Right flank : CAAAAAAGCCCTCTCCGGATATGGAGAGGGCTTTTAATTATTGCCCAGGCATATGGAGATAATGGAACGGATCGGCCAATAATTTATCAAATTGACGGCTGACTGAATGATATCCGATCGCATATGCACCGAGCCTCGGAGCCCAGGCAGCATAACACCGGCAAGCATTGATGACACGTTGCTTGATAGTGTTATCCGTGGGAGTATCTTTCCAACCGCCGCCAGGAATCGCTGCGCCACGGGATTCATAGTCATCCCTTGTGGCCATACTGATGATAAAGCGGACATAATATTGAATTGCCCCTTCATCATAGAGATCCTGCAAAGCTTGTCCACATGCTGCATGGTCCTGGATGGATATCGTGATAACTCAAGGTATAGTGGTCCGCATCCGGATAAAGGTCAATATACTTTTGAATTATGTTTTTCGCTTCATTCACCGTTACACTTTCCCCGCCGTCGCTGTTCGGATCATCAAGATATTCAATATGCTGATTTTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAAAATGGTTACACCTCTTCTAGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.10,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 2 63581-63390 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAECVW010000011.1 Thermoactinomyces intermedius strain CICC 10671=DSM 43846 NODE_11_length_63643_cov_3.233492, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================================== ================== 63580 36 100.0 47 .................................... AATTCACCTTCACAAGCCAGTGTTGCGAATGTCGCCCCGCTGCTTTT 63497 36 100.0 36 .................................... ATCAGTCTACGAAGATTCTGCTTCGCCCTTCGGCTC 63425 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================================== ================== 3 36 100.0 42 GTCAAAATGGTTACACCTCTTCTAGAGGATTGAAAC # Left flank : AAACGAAGGTGCTCGAAAAACGATATTGAACCTCAAGCGTGTCAAGGGTTTCAGACGCATGC # Right flank : CCTTCTTGGCAACTATAAATATTTTCGTCTTAGATTTTAAAGTTCGGTAAGTCAAATAGATTAAAATGCCTAAAAAAGTTGAACCAATCCAAATAGTTAAACCATAATTATCAACTAGTTTTTTCCAATCAAAAACCCAAAAATAGAGAATAGTTATGTGACAGATCACCAATAGCAATGTTATTGAAGGTAATATTATCCTCTGAAATATCATTTATCATACCTCCTATGTAGATTTATAACTTTTTAACAAAAAATTACCATAACTTTATATTTTAAACCCGTGGTGCTAGTTGAGCGTTAAGACTCAACTAGCACCACGGGTCATTAATATTGTTTTGTTATGTTATCGATAGCTAAATTCCAAAATATAGTCTATTACTTTTGCAGAAAAAGCCACGCCGGTCTTTTCGGCTGACCGCCTCCTTGCCTATGGCAATCTGGCTGAAGCCTGCAAAGACCGGCGCTCGGTCTGTTCAATGAAGCACGGTGCAAGCGGA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAAAATGGTTACACCTCTTCTAGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.70,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : NA //