Array 1 70964-73007 **** Predicted by CRISPRDetect 2.4 *** >NZ_RPDJ01000043.1 Streptomyces cavernae strain SYSU K10008 Scaffold34_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ============================= ================== 70964 33 100.0 28 ................................. TCTTGAACTTGTCGAAGCTCTTGTTGGC 71025 33 90.9 28 .............................TG.A GGGCGGCATCAAGATCGCCCCGCATGCG 71086 33 90.9 28 .............................AG.A CGTGATCGGGTGCATCGATGCCGCCCGG 71147 33 90.9 28 .............................GAC. CCGCGAGCGCCAGACACGCAGCACGGGA 71208 33 93.9 28 .............................T..G AGGCCGCGACCGGGACTGGTGAGGCGGC 71269 33 87.9 28 .............................GTAC GGGGCTCGTCACGGCCCCGGGGGTATGC 71330 33 90.9 28 .............................AAT. GCCCGCAACCCGTGCTCGGCGAAAACGG 71391 33 93.9 28 ...............................AA GGGCACCGCCGCCGAAACCGCGGTCGTC 71452 32 93.9 29 .............................T-.. GGGACCCGGGACGTCTCGGCTTCCCTTTC 71513 33 93.9 28 .....T.........................T. GTGGTCCCTCCTGGCCGACGTGATGGAG 71574 33 87.9 28 .............................ATAG CGGCTCGTGTTGAGGCGCTGCGCCGTGA 71635 33 90.9 28 .............................AT.A TTGTGGCTTACGCCCAGTCGACCAAAGC 71696 33 90.9 28 .............................AAC. CGGTGTTGTGGCAGCGAGGGCAGCGGAA 71757 33 90.9 28 .............................G.AC GTTCGCCATTGTGAAAGAACACCGTGAG 71818 33 100.0 28 ................................. CAACCGCGGCGACGGCAAGGACCCGTGG 71879 33 93.9 28 .............................T..A GGAAGGCCTGCGTGAACGTCCCCAGCGA 71940 33 90.9 28 .............................TG.C CCGACCTGATCGACCAGGCCAGTAGGCC 72001 33 90.9 28 .............................AGC. GGACCCAGGCTGCAGACTCCTCGAGGGT 72062 33 90.9 28 .............................G.TC TTCGATCGTGAGTTCGCCGGGAGGAACT 72123 33 97.0 28 ................................G CCACTCTGTTATCTCGATCGCTGGGGCG 72184 33 90.9 28 .............................G.TC AGGACGAGCTGATCTCCTCCGGGCTCGC 72245 33 87.9 28 .............................GACA AGGCTTCATCGAGACCCCCACTGCCCCC 72306 33 93.9 27 .............................A.A. GCGGGAGGCCCTCAAGCCGGGGGCGGC A [72336] 72367 33 87.9 28 ......................C......GT.C CCGCCAGGGCCGCGCCGGCCGAGATGGA 72428 33 87.9 28 .............................AGAG CTGCCGGATTCTGACGCGAGGGGGTGGC 72489 33 93.9 28 .............................T..G CCCACTGGTCACCGAGGGAGATCCGGAA 72550 33 87.9 28 .............................AGAA CATCATGGCGGTTACCGCCCCTCTGACA 72611 33 90.9 28 .............................AT.G AGCCGGAGCAACTGGCCGCGCTGAGGCG 72672 33 93.9 28 ..............................GT. GCGCGTGAATCTGGAATGGGCCGCCACC 72733 33 90.9 28 .............................GA.C CAGCGGAGGAGCCCGGAGGTCTGTTCGA 72794 33 87.9 28 ...G.........................ATC. TCGATTACGTCAAGAACGGCTACAGCGC 72855 33 97.0 24 ...........T..................... GACGCCGGGCTCGATCTCGTTCAG ATCA [72884] 72916 33 90.9 26 .............................G.CC CACCGCCGGGGAAGGGACGGTGAGGC 72975 33 81.8 0 .........CT..........A..G.....T.G | ========== ====== ====== ====== ================================= ============================= ================== 34 33 91.6 28 GTCCTCCCCGCCGACGCGGGGGTGTTCCGCCGT # Left flank : CCGCATCGTCCGGGACGTCCAAGCCCTCCTGACACCAGGGACCTCCGACACCGTCTCCGACACGGAGGAGCGCTCCGAGCGATGTGACGTCGAGATGGTCCACCTGTGGGATCCGAAAACAGGTGTGCTGCCAGCAGGCGTTAACTATGCATCAGGCGGTGCCTGATGCCATCCATGCTGGTGATCGCAACGACAGCAGTTCCTGACCACCTGCGCGGCGCTTTGAGCCGGTGGACCAGTGAAGTCGTTCCCGGAATCTTCGTGGGAGCCGTCTCCGCCCGCGTACGCGATCAACTTTGGCAGGCCGTCACCGATACAGTCGGCAACGGTGCAGCCGTCCTCATCCACCCAGCTCCCACAGAACAGGGCTATGCCATCCGAACCGCAGGCACCCGGCGCCGCGTCCCTGTCGACTTCGACGGCCTCACCCTCATCCGTATGACAGCAGCCCCCAAGGTAAATTCCGAGCAAAGCCCTCCTTAAGCTGCAGGTCACGAAGT # Right flank : GTTGTCCGGCACCCGGAGTCGATGGGCTGATCCTCCTCGTCGACGCGACGCCGCAACCGGGGCCCGCCCCGCTCCCAAGAAGCCCAGCAGGACGCCACGTCATGACGGTGAGGGACCCGTCGGCAGGTCATGAGGCGTCTGGTGTGTGTGCCGTCCAGGGCCGTCGAGCGGTGGTGTGGTGCAGCGTCGGTCCTTGGGGCTGTGGGCTTGGCTTCGCTGGCCTGGAGGATGGCGAGGCCGGTGTGCTCCGTCTGCTGTAGTACTGAACGGCCGCAATCACTCTGGGCGGAGGGCGATTTATGCGTGTCAGTAACCGGGCGAAGCGGCTGCATGCCCTGGCGTGGGAGCTCAACAAGCGTTTCTTTCACGCTGGTGTCTGAGGTTCACGGGGTGATCGACGCCGCGTCGGCTGGCCTGCAGGCGCGGGTAAGGGGCGAGGCGCAGGCCTCATAGCCTGGGCGGCGCTGGAGTCGACTGGCAATCTGGACGGGGGCCGGCAG # Questionable array : NO Score: 4.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.58, 5:0, 6:0.25, 7:-0.01, 8:1, 9:0.09, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCGCCGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //