Array 1 343874-342914 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDFE01000017.1 Desulfoplanes formicivorans strain Pf12B, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 343873 32 100.0 35 ................................ GCCCTGCCTTATTTTGATAAGTTATTTGTACAGTG 343806 32 100.0 34 ................................ AAATAATGTGTGAAGTTGAGGAATGTCTAACCAA 343740 32 100.0 34 ................................ GCCATCTTTTTATGGCGATCAAACGGACCGCCTT 343674 32 100.0 34 ................................ TTGCAAAAACGATTAGGCACGCTTGATGATGCGA 343608 32 100.0 34 ................................ AATGGCACATGGAAGACAACTGGAAGTGACATAA 343542 32 100.0 34 ................................ CCTATCTCGCTCATCCGTGTTGCCGCAAGTTCGT 343476 32 100.0 34 ................................ CAACCTGCAGAGCCTGAACCGAAGAGCGCCCATT 343410 32 100.0 35 ................................ AACACCATCTTTAGTCGCTGAAACCAATTTTGCCC 343343 32 100.0 34 ................................ TTTTTCACGACCAGGACCGGCAACAATCACTAAA 343277 32 100.0 34 ................................ TTTCCCGCAATTTGTCTCAAAGCCTTTGTCCGGC 343211 32 100.0 34 ................................ TAGCATGTACGTCCTCCATCAATTGCGGCATCAA 343145 32 100.0 36 ................................ GACTCCATCATCCGTCGTCTCGGCATGGCAACTGGT 343077 32 100.0 34 ................................ ATCCACAACAACGCAACCAGCGAATGGCTGCGAT 343011 32 100.0 33 ................................ ACGATTGGGTACAAATCAACGGCATGTCCCCAA 342946 32 84.4 0 .....................C.A.CC....G | A [342918] ========== ====== ====== ====== ================================ ==================================== ================== 15 32 99.0 34 GTCGCCCCTCACGCAGGGGCGTGGATTGAAAC # Left flank : TCCGCCTTTTGTCTGGAAATAGGAGGCGAAGTGTATGATGGTCTTGGTAAGTTATGATGTTTCCCTGAAGGATGCAGACGGGCCGCGCCGGTTGCGACGCATTGCCAAGGTCTGCACCAATTATGGACAGAGAGTACAATTCTCGGTTTTTGAATGTATTGTTGACCCTGCTCAATGGGCCTGTTTACGGGCTCAACTTATTCAGGAGATGGATGAAACCCAGGACAGTCTTCGTTTTTATTTTCTTGGAGCCAACTGGAGACGTCGCGTTGAACATATCGGTGCTAAAGCCGGAATTGACCAGGAAGGTCCCTTGGTTTTGTGACCCGCGAACCCCGAGCTGACATGTTTTATTAGGGAGGTTCGCAATATATTTTGTTGTTGTTTTACAGTATGTTAAAATGAAATATCAACAATGTTTGTTCCTTTGAGCTTACTGGTTGCTTGTTCGCGGGATCATGCCGCTCAAGGTATGACCCATAAGGCTTCTCAGATGAGCA # Right flank : GCCCCCGGGAAGTCATTCCCGGGGGCCTTTTTCCTGAGGTTATTTCAAGTATTGCTCAGCAACCATTTCATACAAGCCCAGTTCTTTCAGCTTGTCCACCGGCACTCTGAATGTTGCCGTGACAACACCTGGCGCTCTTCCTATTTCTATATTGCCCGTGATGGTGCATCTGTTCATGACTTCGGGAACGGTCATGCCCAGAAGATTGCCCGCTCTGGTAAGGGCTACCTGAACCGCGTGGTTGAGGTCTTTGCCTGTGCCCACAAAGGCCAGGGGGGCGGAATCTTCAACAGGAACGTTCCATTTTGCTGACTCGGCCTGGGCAAGGGCCTTTTCTTTTTTGGATAAGGGTTTGGCCAGATAGGGGAGATCTTCGGGAACCGGGAGGATGATGGGGCCTTCTATGTTCAGGCCTTTCAGAACAGTGACCTGCATGGTCACAATGCCGCACACATCCGTGGTGTGCCCGGCAATTTCACCATCACCCTGCATGGCATGCA # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCTCACGCAGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCTCGCGCAGGGGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.80,-7.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.15 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 175598-175417 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDFE01000015.1 Desulfoplanes formicivorans strain Pf12B, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 175597 36 100.0 35 .................................... CCGAAATGACTTTGCCGTTCGGGAGTTCTTTCTTT 175526 36 100.0 38 .................................... TCACCGAACGAGCTGTTGTTTACAAGCTGGCCACACCA 175452 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 3 36 100.0 37 GTCTGAAACATTGCCCCGACTTGAGGGGATTGAGAC # Left flank : TAGAAATAGGCTAGATTTTTTGGAAAGGAAATATGCGGCTATCCTTACGCTCTTATTGCCAAAATGCCGGTTGAAATTTTTAAGGCAGGAATTTCTAGCCCGTTTGGCTGATTGTCAGGATAGTGGATTAACTTCAACTCCTCAAGTCTGGAGCAGGATCATTTCTGGAGGTGTTGCTGACAGGGTTTTCCAAAGAAGAACAAAAAGGGTTTCCAACTCCTCGAAGGAACGGCATCTTTTTTACCCAGGGACCAATTGTTTCATGTTGTTTCATCTACCATCCATGATTGGTATTTCAGGGCGCAATGGGCCAACTTGTTGATTTGTTTACCCTACATCAGATGGGGTGGATGGTAGAGCCAATCGGTCATTATTACAGTAGGTTAAACATGAAAAATTCGAAATTTTCATTTGCAAAAATTTACCGGACCCCAAAAAAGGGGGAGGTGGATGGTAAAACGGTTTTCAACCCTTGCAAGACGTGGGTTTTGGGAGTAAGA # Right flank : AAAAAAATGGCAGGCATTCTTGTTTGAATGCCTGCCATTTTTATTGGCAAAGGAATTGCGGAAGGCGGTCCGACACAATTTTATTGTTAGGCATTTATAACTGCAATCATAGTTTTTTTTGAGAGGCTCAATCTTTATTTAAAAGAAATGCTAACCCAGCAACAGTGAGAGTACCTATAACACTTAAGGCACCAAGTGCTGCCCCTTTTGCGAAGCCAGCTTCATGGCCTTTCTTGTAACCTATTTCTTCACCTGCTTGATAACCTTTGAAATCATCACTACGTTCCTTGGAAAAAATATATTCCTTGGCTTGTTCTGAAATATCTGGCTCTCTTAACAATCTTTCCAGCAGTGCCCGTGCAGCATCAATTGATAGTCTATTAAGTTCTGCGAAATACTTAAGTTTGTCTTCATTGTGTAATGTATCTTTAGCTTTTTTTCTAAATGTATCATCCATATTAGTATCCCTTAAAATTTGTCTAATGCTTTGCTCACCGGTA # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAACATTGCCCCGACTTGAGGGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.80,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.74 Confidence: MEDIUM] # Array family : NA //