Array 1 26209-25921 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPAD010000010.1 Clostridium ventriculi strain BSD2780061687_150420_E11 NODE_10_length_32578_cov_46.7478, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 26208 30 83.3 23 TA..T...A........T............ CTATTCTGTTATTATACTATTTA C,AT,G [26182,26190,26193] 26151 30 100.0 36 .............................. TTAAGGAAAGTTTAGGGATAGATTACAACGTTGATT 26085 30 100.0 36 .............................. TTGTATTTTAAGCCATTTAATAATATTTTTTTAGCT 26019 30 100.0 39 .............................. ACCCTATACCCTAGAGTTCCATTAAGAGAACAAAATTTA 25950 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 5 30 96.7 34 GTTAATAATTAATATTAGATATTTTATAAT # Left flank : GTGGTATAAAAGGAGTGTTTATTATGGCAGGTATAAAGGCAAATATAAAAGGGATGGTTATGGCGATAGAAAATAAGGAATTTCAAAAAGAAAATGGTGAGATATTACAATATATAAAACTAAAAATCCATGATAAGGAAAGCAAGCAAACATTAGATGTTAAATATGCTGGGGAAGTTGAGGAATTTTTGCAAAAGGGAATAGAAGAATACGAAACTTATAATATTATATTAGAGTTTAGCACATATAATAATGGTGGTAGGAATTTAATTAGTTGTAAGGTTACTAATATAGAATAATATTAATTCTTATAATATTTTAGATGCTGGAGTATTAGCCAGCATCTTTTTTTTTATAAAATCCCACTTATATATTTTGTTATCTATATTATATATAATTATTACATTAATTGTAAAAATATAAAAAAGTACATGGTAGAAAATTTTAAAAATAAGAAAAAAATGAAAAATATAAATAAAATATAAAAATTAAACTTTACT # Right flank : AAAAGAAGGTTATAATAGAATAGGTTGATAATTTTGTATATTTTTAGATTTGAAAAGCACTTACAATTAATTTTGTGGGTGCTTTTTTGTGTCTATCAATATCAAACAATGCTAATCATCGACAAACAAAAAACCTAAATCTACCTAAACATAGACTTAGGCTATATTACTCTAAGCGCTACCCGTTTACACGTGAATACGTTAGAGTATATGCTAGAAATCTCTAAAATATTCATATTTTATATAAAATAAGTAAAAAAACTTAAATATGCTTTTAAACATGTTAAACAAAGTAAAGCAAAGATAGAGATTATATTATAAAGTAGTACAATGTACTACTTTTTTTATCAAAATTGCACATTTTCAATTCTATTAAATATTTTCACATTCTAAATTTTAATATAGTGCTTAGGGACTTTAGATAAGGAGCAAATAATTATAAAAATAGTGTAAAATTGCAATCATTTTTTTAAAAAGATAGGCGCAAACTAAGTATTTAT # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAATAATTAATATTAGATATTTTATAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:93.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [78.3-88.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 1844-2132 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPAD010000038.1 Clostridium ventriculi strain BSD2780061687_150420_E11 NODE_39_length_2133_cov_216.975, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1844 30 100.0 34 .............................. TGGCGGATATGTTTCCCTGTTTAAATCCCTTCTC 1908 30 100.0 34 .............................. AAGGTTTCTGTTAATGTAAATTTACCTTTTATAG 1972 30 100.0 34 .............................. GCAAGTTTTATTGTTTCCTGTAAACATTCGTCGG 2036 30 100.0 37 .............................. GAGAGCCTATGAAAGGGCAGGCATTCAATTTGTGGAA 2103 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 5 30 100.0 35 GTTTAAGAATAACAATAGTTGTATTTAAAT # Left flank : AAGAAAATAGAAAGACTCAAGAAAGTTTTTCTTGTACAGTATGTAATTATAAGGACAATGCTGATGTTAACGCAAGTAAGAATATTGCTATTCCTGATATAGAAAAAATTATAGAAGAACAAGTAAAAAAACAATATTAAATATTGCAATTCCTATGGAAAAATGTTACATTATATTTATAATAAAGGTAGATTTAGCTGCCTAAAGGTGAGAAGTGCTGTTAAAACAAATTATTATAAATAAGGAGTCCCTTGCAGTAACTCTCTACCAAACGCTCCTATATTAAATAGGTAAAAGCCTTGTGCAAAACATTTTAATGGGCGTGTACAAGAATACAATATTGTTATTTAATAATTTAATAATTTACCAAGTAATTTTAGAAAACATAGTAATAAGGCTATTTTTTAAAATGTAAAATTAGCTGGTAATTTAATTAATAAATGGCTATTTTAAAAGAATTCATAGAAATTTATTTAAATACAAATGGCTATTTTACTGTG # Right flank : G # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAGAATAACAATAGTTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.90,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 1 588169-588722 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPAD010000001.1 Clostridium ventriculi strain BSD2780061687_150420_E11 NODE_1_length_1520648_cov_25.1415, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 588169 30 100.0 36 .............................. TTAGATATAGAATTGTAAATATAAATTGATGGTGTT 588235 30 100.0 37 .............................. TCATACAGTCCTTCAAATGCGGAAATTACCGCGGAGT 588302 30 100.0 36 .............................. TGATACTGGTTTTGTGCAACACAATGGCGTATACAA 588368 30 100.0 35 .............................. AAATATTATATAGAGGAATAAAGGAGATGAAAAAT 588433 30 100.0 35 .............................. ATTAATCTTAAATATTGTGGAGTTATTCCAAGCTT 588498 30 100.0 35 .............................. ATGAAAGGGAGTGCTAATTAATGGCTCAAAGAAGA 588563 30 100.0 35 .............................. AGTGGCTTTTGTTACGTTTAAATTAAAAATAAATG 588628 30 100.0 35 .............................. AACTTTTCTATAAACATAGATATATTAATATTAGT 588693 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 9 30 100.0 36 ATTGAAGAATAACATTAGATGTATTTAAAT # Left flank : CTTAAAATGTTTAACATTAAGGAGAAAATGTAGAAATGAAAAAGAAGATAAATTATAATTATGCATTTTTATTTTATGATGTTAAAGAAAATAGGGTAAATAAGGTTTTTAAAATATGTAAAAAGTATCTAAGTCATTATCAAAAATCAGTTTTTAGAGGAGAAATAACTCCTTCAAATTTAATAAAATTAAGAAAAGACATAAAAAATGTAATTGATGAAACAGAAGATTTTATTTGCATAATAAAATTATTAAATGATGGAATGTTTGGAGAAGAAATAATAGGAGTAGCTAATAAAACAGGAGAAGACTTATTTTTATAATATATTTACCAGGTAAAAACAATTTTAATTTTTTAAAAGTATGATTATTAAAGGCTTTAAGATTATTTTTAAAAGTTTATAGAAATTTTTTTGATTACTTGGTAAAATATTATTAGAAAGTGATAAGTAAAGGCTTAACAGGGAATTAACTATTTTAAAAATGGCTTTTTTATAGTG # Right flank : TTGCTAATTGGTTGGTAATATTCCTTCTTTTTATGTATATAAAAATTATATCAAAGATGTAGATTTAATTAAGAATTAAATTTTTATCGTTTTAATTTAGTATTTTAAAGTTTATAATATAACTATGACATATAATTTTTAAGATATAAATAAGGAAGTGAGTGAAATGGAAGAAAATTTAAAATTAAAAGAAGAACTAAAAAGTGAAATTAATAAGGAACTTTATGATGATTTAAAGAATATTACGCAAGAAGTTGCAGGAAAAGTTAGAGAAGAAATAAGTTATGATAGTATAAAAAATCATGAAAAAGCCCAAATAAATGAGGAAGTTTTAACTATGGCTAATAATAATGAGATTAGCAAAGAATTAAATAATTCAGTTGATAAGCTTATAAAAGAAGATAGAAAACTTAAAAAAATGTTTTTAATAGATTTAATTGGTTGTACTGCTATGTGTGCTGCTACAATTTATCTTTTACATAAAAAAAGAAAATAAAAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAAGAATAACATTAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //