Array 1 153266-150613 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMUC01000014.1 Streptomyces griseoflavus strain JCM 4479 sequence14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 153265 29 100.0 32 ............................. ACCGGCCAGGGGCCGGTGCGGGTCGACTGGGG 153204 29 100.0 32 ............................. GGCGATGCCTGCGTGCCGGGTGACGGCTGGCC 153143 29 100.0 32 ............................. GGCGATGCCTGCGTGCCGGGTGACGGCTGGCC 153082 29 100.0 32 ............................. GACGACCGCGGCGCGGGCGATCCGGTCCACCG 153021 29 100.0 32 ............................. ATTCGTCGCGTCACGGGGTGATCATCGCGCCC 152960 29 100.0 32 ............................. CGCCGCCGCGACTGCACCGGCAGCTGGCAGGC 152899 29 100.0 32 ............................. CCCGCTCGATGTCCTGCACCGTCGCAAGCCCC 152838 29 100.0 32 ............................. GTGCGTGCCACCTCGCCATTCGCCCGCCACCG 152777 29 100.0 32 ............................. GAAGCTGACGGCGCGGTGGCGGCGTCTCTCGG 152716 29 100.0 32 ............................. AACCTCCTGGCCGAGGCCATGAGCAAGAACGA 152655 29 100.0 32 ............................. GACGCCGGGCACCGCACCGAACATCGGCAACG 152594 29 100.0 32 ............................. TCGGCCGCGGTCGTTGCGGAAGGCGCGGCCAA 152533 29 100.0 32 ............................. AGATCCTTGCTCAGCCCGGACTGCGTGCCGTA 152472 29 100.0 32 ............................. CACATGCTCCCCGGCCCCGGCCTGGCCTATGT 152411 29 100.0 32 ............................. CACCCGCAACGCCCCACACGTCCCCACCCACA 152350 29 100.0 32 ............................. TTGACGGGGTCCTCCTCGAGGACATCGAGGGC 152289 29 100.0 32 ............................. ACCCCGCCCAATTCGGTGCAGGGTGGCAGCGA C [152284] 152227 29 100.0 32 ............................. GCCAGATCGTGGGCGTCCGCCCGGGACGGCTG 152166 29 100.0 32 ............................. GACGCTGCCGCGCATCGCAGAACTCGCGAAGG 152105 29 100.0 32 ............................. GGCTTGGCGGTGAAGCCGACGGTGACGGCGGT 152044 29 100.0 32 ............................. CCGGCGCCTCCGGCGAGCAGCCCGCCCGCGGC 151983 29 100.0 32 ............................. GGTCGGACGTCGTCCGTGGCGCCGCAGTGGCG 151922 29 100.0 32 ............................. AGCGCACGTGCGCCATGGACTGTGACCCGAAC 151861 29 100.0 32 ............................. TCGGTGCTGATCTGTTCGTGGGCTTCGCCGCG 151800 29 100.0 32 ............................. CCCGCGGGGCCCCGCACCATCCGGGGCCCCGC 151739 29 100.0 32 ............................. GGCCGGGGTGGAGCTCCACCCCGAGACCGCCG 151678 29 100.0 32 ............................. GGAGACATGACGGTGCCTTTCGGGTGCAGTGG 151617 29 100.0 32 ............................. ACCCGCCTGAACCAGCTTGACCGTGGCATCCA 151556 29 100.0 32 ............................. TCCCGCGCGGCGGCCTTGTGGTCGCCGCCGTG 151495 29 100.0 32 ............................. AGGTGCGGGTCAGCGTCCAGTCCCTTAGAGGG 151434 29 100.0 32 ............................. GACGACCAGGCCGCGTCCGTCCGCCCCGCGTC 151373 29 100.0 32 ............................. CCCCGATGCCGACGAAGAGTGACCGCCGCGTC 151312 29 100.0 32 ............................. GGGGAGCGGGGGCCGGCGGCGGCCTTCGTGGA 151251 29 100.0 32 ............................. AGCTTGCGGGACAGGTCGGACATTGGCGGTTC 151190 29 100.0 32 ............................. CGGGCACCGGGTCGGGCTCGGGGACCGGCTGC 151129 29 100.0 32 ............................. CCGCGGTGGTGAGCGCGTTGGACTGCCGACGC 151068 29 100.0 32 ............................. GCGAGCGGCATCCCTGCATGGCTGTCCGATGC 151007 29 100.0 32 ............................. GCGAGCGGCATCCCTGCATGGCTGTCCGATGC 150946 29 100.0 32 ............................. TGCGACTGCAACGTCTGCGAGACCTACGCATC 150885 29 100.0 32 ............................. GTGAGCGGCATCCCTGCATGGCTGTCCGATGC 150824 29 100.0 32 ............................. GCGAGCGGCATCCCTGCATGGCTGTCCGATGC 150763 29 100.0 32 ............................. GACTGCAACCCAAGGCGCAGGTAGCCGTCGTC 150702 29 100.0 32 ............................. GACGGCGACGTCACGTTGACGGTCGCGCCGGC 150641 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 44 29 100.0 32 CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Left flank : GGTGACCGTCATCGTCCTCACCAACTGCCCGGCTGGACTACGAGGTTTCCTCACACGCTGGCTCCTGGAAATCTCTGCAGGCGTGTTCGTGGGCAACCCCTCGGCCCGCATCCGCGACGTGCTCTGGGAAGAGGTCCGGCAGTACGCAGGCCAGGGGCGCGCCCTACTGGCCCACACCACGAACAACGAGCAGGGCTTCACCTTCCGCACTCACGACCACACCTGGCACCCCACCGACTACGAAGGCATCACTCTGATCCATCGCCCCGACCCGAACGCACCGCCACCCGGGCCGGCTCCCCAAAGCGGCCCGCCCTCCGGCTGGAGCAGGGCTGCCAAACGCCGACGCTTCGGAAGAGGCTGATGCACATGAAACCTCTAACGCCCCATATGCCGGAATCAGAGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACTCGAAAACCGCTACCGACCCAAGTAAAACAGCAGGTCATCCAGT # Right flank : CGTGGCCATGGCCCTGTGGACCTGGAGCAACACAGCTCTCCGCACCTACACCTGACCGGCGAAAGACACCCATCGTTCTCGGAGAGACAACGGCCTCTGAAGCAAGCGGATCCCCGACAACCCGCAGTGCCTCGTCCTCACCAGCTGGGCTTGCGCAGTCGGTCCCGGCGAAGCTCGGCTCTTCGACACCCGAAGTCGTGACGATCAGCGCCATGACACTTTGCGCCGTGCGTCCGCACTGCAGCCGGCTGGAAGACGGCGGTAGCCGACTACGCGGTCACATGCCGGTGCGGAGGCCGTCGCTCGGTCGCTGGTGCTGGAGCTGTTCGCGGGCATGCTGAGCATGCGGCGTGCTGTGCCGCCTCTCCTGCTGCAGAATTGCGCGGGCTGCCTCGCCATACATGTACCGCTGGGGGTCCTGCGTGCTGCTATGCCGGCGCGCCTGCTGCTCGGCTTGGAGTTGCTCGGCGACCCCACGCAGATTGCGGGCCTTGGTCTGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [33.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 163743-166393 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMUC01000014.1 Streptomyces griseoflavus strain JCM 4479 sequence14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 163743 29 100.0 32 ............................. TCCATGAACTGTGGGAACCGAGTCAAGAGGAA 163804 29 100.0 32 ............................. GGGCGCAAGACCAAGGCAGCGTCCGGCGGCTA 163865 29 100.0 32 ............................. CGCTGGTCGATCTCGGACCAGCAGATCGACGG 163926 29 100.0 32 ............................. TGCACGGCCGGCCTACCTCATCCCCATCGTGC 163987 29 100.0 32 ............................. GAGTCTTTGAGAACGGCGCACCATGGGCGGCC 164048 29 100.0 32 ............................. GCCGTAGTTGGCGCGGGTCTCCGGGGAGAGGG 164109 29 100.0 32 ............................. GGCACCACTCCCACCGGTGTCGACTACATAGT 164170 29 100.0 32 ............................. AACACGAACAACGGTGCCCGCCGCCTCCGGGA 164231 29 100.0 32 ............................. GGTCTGTCAGAGCGTCTGACATGTCAGGGGGT 164292 29 100.0 32 ............................. TACCTGCCGGTGGTTCGATTCGTACCTTCCGA 164353 29 100.0 32 ............................. CTCATCGCCGGGCTGAACTGGCCCGCCGCCGT 164414 29 100.0 32 ............................. AGCGCTCGTCATCCTCGGCACGGCCAAGGTGT 164475 29 100.0 32 ............................. CTCCGCGCCATGTGCCAGGGCTGCCACCTCCA 164536 29 100.0 32 ............................. TGGTCGGCGCTGCGGATGTCCGCCAGCGTGGG 164597 29 100.0 32 ............................. TCGGCGCCGTGGTCCTGGACCAGCTTGCGCAC 164658 29 100.0 32 ............................. GACCAGCTGGTGCCGATGCGCCGCGGCGAGGG 164719 29 100.0 32 ............................. GTCACGTCCGCGCCCAGGTCCTCAGCCATCCA 164780 29 100.0 32 ............................. TACCAGAACGGCAGCGGCGTGGCCGAGGTGGA 164841 29 100.0 32 ............................. TCCTAGAAGGGCTGGGCGCCCCAGCTGCCGTT 164902 29 100.0 32 ............................. GGCGTCCCGTCGGCGCCGCCCCCGAGCACCGG 164963 29 100.0 32 ............................. GCGGGCGGTCTTCTCCAGCTCGGCCGGGACGG 165024 29 100.0 32 ............................. CGGCGGCCACCGTCCGCCCGAAACTATCCGTG 165085 29 100.0 32 ............................. CGACCGGGGCGCCGTGACCCTGGCGGAGCTGT 165146 29 100.0 32 ............................. GATCGGTGAAGGCCGGGAAGTAGTTCGGCATA 165207 29 100.0 32 ............................. GTGGCTTCCTCGGCGTCGCTCGGCAGGAGCAG 165268 29 100.0 32 ............................. AGCTGGAAGGTGGGCGCGCCATGCTGATCCCC 165329 29 100.0 32 ............................. CTGCTTCCTCGCGCGCGCACGCGTAGGGCCCT 165390 29 100.0 32 ............................. CGGGCCAGGGTGGTGACGCCGGCGGTGCAGCC 165451 29 100.0 32 ............................. TGACCGGCCTCCGCAGCATCGTCCACCGCGGC 165512 29 100.0 32 ............................. ACCGCGCTCGCCGCGTTCGACCGTGCCGCCCG 165573 29 100.0 32 ............................. CGGGAGTCGGTCTGGACGCGGGCGACCGCCCG 165634 29 100.0 32 ............................. GACGCGACGGTGCGCAAGTTGCGGTGGACCTG 165695 29 100.0 32 ............................. GGGGGGGGCACCCCCGACCACCACCGGGGACG 165756 29 93.1 31 ...........G................G AGAAGCCCGTCCCCCGTCAGTTCGGGCAGTG 165816 29 96.6 32 ............................G AAGGACAGCTACGGCACCACCTTCCACCCCAA 165877 29 100.0 32 ............................. CACGCCGGCTCGGGTGACGACGACGTACTGAG 165938 29 100.0 32 ............................. TCGCGGGTGGTGACCGGGAGGTTGTTCTTGCC 165999 29 100.0 32 ............................. TCGGGTATGGCGGCGTCGGGCTGCATGACGGT 166060 29 96.6 31 .......................C..... GAGGGTTGCCGTCCTTGTCCGTCGCATGGAT 166120 29 96.6 32 .....................T....... AGCAGCGTCCTCGTGACCGTGATGGAGGCGAC 166181 29 100.0 32 ............................. GACGTCGGCCCATGCGTCACCGCCCCCTGGTA 166242 29 100.0 33 ............................. CGATGGCACTGCCCAGTGATGGCGCCGCGTGGC 166304 29 96.6 32 ............................T CGTGGGAACGAAACTCCGCCGCAGGTCAGGCC 166365 29 93.1 0 ..A........................T. | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : ACGCCGGAGTGGCCTTGCCGATGTCATGCACTCCGGCGAGCCATACGGCGAGGGTGCGTGCGTCCAGTTCGCCCTGCGGCAGCGCTTCTGCCACGAGCCTCCGTACCCCCACGGGAAGCCACCGGTCCCATAACAGGCCGGCTACCGCGGCACTGTCCTCCATGTGCCGCCACAGCGGCAACCAACCGTCGCTGTCACGATCATGCTTAGCCCAGACGGACCGAGCCGACTCCCCGAGCCGACTCAACAGATCCGGACGAGCACTCCCCCCAACGCTCATGAGGGATTAGTACAGGAAAAGCTCGGCTTCGTAGGTCAACATGAGTGGATAGGACTATTCGCAGGCAGACAGCGCCCGCAAGACGTACCATGATCCGCTCGTCCTTGAGCCAGTCAGAAGTATCCCGCGAGACCGGATACCCTCCATGTCCTATTTGCCGGAATCTGCAATAGTTGCTGAAAGCGCGCTTCAGCAGCAGTAAACATGCAGGTCAAACAGT # Right flank : CTCGACGACGGCCTGTACCGGACAGCCGCTTCCCCACGGCTGCGCCGGCCACGACGGCGGGTGGTGATCGGAAGGGAACCACTGCCGCTGTGTCCATCCGGAGTTACCGAGAAGGGTCAAGCGCGGTTCAGTGGTGCGGGCGTATCACTCGACGGCACAGCGAGGGCGTACAACCGTTCCCGGATGCGGCGCGCGATCGGGGAGTCGGGGCCGTGGATGTCGCCGGCGATCGTCAGTAGGTCGGTGCCCAGGCGCTTCCGGTCGGCTTCCTGCGGCATGGCTCGCCACAGGCTGTAGGCGCGGCGGGTGGCCTCCTCGACGTCGGGGTGTCTTGGGCCCTGGATGGTGACGCGCAGTTGCGCCGCGTGCAGATACCACGACAGGCCCGAGGGATGGTCCCCGGCGAGGGCGGCCAGGTAGCCACGAACTTCGCGGACCTGGATCGTATACAGATGTGGTTCGCCGTACTCGGCGGTGACGTTCTCGTCGAGCCGGGCCGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 181780-183093 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMUC01000014.1 Streptomyces griseoflavus strain JCM 4479 sequence14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 181780 29 100.0 32 ............................. CAGTCGACCGCGTCCGGCTCCCCGGTCACCGT 181841 29 100.0 32 ............................. GAGATCGCGCGGCTCACCCGCCGCTCGCAGCG 181902 29 100.0 32 ............................. ATCATCGACGTCATCGTCCAGATGATCGGGAA 181963 29 100.0 32 ............................. GGGTGCTCCCGTGGTAAGTGGTGAGGTGGTAG 182024 29 100.0 32 ............................. CGAGGTACCGCTTACGGCACGTCGGTTCACGG 182085 29 100.0 32 ............................. GGTCACTGCCTGGACTCTCAAGCTGCGCGACA 182146 29 96.6 32 ..........................G.. CGCATCACGGACCGCTGGACGACGGCGTTGGC 182207 29 100.0 32 ............................. CATGCGCGAGTCATAGTGTCTACAAACTGGGT 182268 29 96.6 32 .....T....................... AAGGCGTCGCACACGCAAGCGGTGAGCTTTTC 182329 29 100.0 32 ............................. ACCGGGTCGTATGAAATCCGACGCTACAAGGG 182390 29 100.0 32 ............................. ATCGAGCGCGGCGCCTTCGCCAAGGTCAACCG 182451 29 100.0 32 ............................. GAGGGCCGTAGAGCGCCGAGACCGTGATTGGG 182512 29 100.0 32 ............................. CTGGAAGCGCCTCGACACCGGCACCACCAAGG 182573 29 100.0 32 ............................. TGGTTCAGCACGCGGAGCTGGTGGCCCGAGAG 182634 29 100.0 32 ............................. AACCATGACCCGCACAGGCATAGGTCCCCCTA 182695 29 96.6 32 ...............C............. ACGGCTTACCTCCGTGTAGTCGGTGTCAGGGC 182756 29 100.0 32 ............................. CCGGCCCGCGGCTACTCACCGGGGTTTACATG 182817 29 93.1 32 ...........................TT TCCAGGCCGCGACCGCCCGCGGCAAGAGTCAG 182878 29 96.6 36 .....................G....... CCCCCCCGACACGGTGGCGCGCCGGCGGATGGACGC 182943 29 100.0 32 ............................. CGGATGTCCCAGACCTACAGGGACCGCCGTAC 183004 29 100.0 32 ............................. TTCCTCGACCTCATGGCGTTGGACGACACGCT 183065 29 96.6 0 ...........................A. | ========== ====== ====== ====== ============================= ==================================== ================== 22 29 98.9 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CAGACCCTGGTGGAGCGGGCCGAGGCCGCGAACGTTCAGCGGGCCCAGGCGGGACGGCCGCCCCGCTTCGTACCAGCCGATGTGGACGCACTGCGGGCCGTCGCCACATTGGCCGATCACCACGGCGGCCGGCTCGCGGTCACCCTGCCGCCCGAACTCACCCGCTCCGCGTTCCGCCGGACGCCCGGACTGCATACGGCCGCGCCGTTCCCCAGGGCCGTCACTCCGACGAGGTCGGCAGTTCGGGCTACGACGGCAGTACGTCCGCTGCCCGCGTTTCGAGACCCGCAGTGATCACAGAACAGCGGCCTTTTGGGCAGGGGCAGATACAACTCGGGGGCGGCCGCGTTCCCCTACCGCTGCGGACCCCGTTGTCCTCCTGCTACTACACGTCTTCGTCCGGTCTTCCAAACTCACATCACCCTAAGTCCTATTTGTCGGATTCTGCGAAAGTCGCTGAAAACACGCTTCTGCGACCATAGACTCCCAGGTCAAACAGT # Right flank : CTCGGGCGGTGAACGACGCAGGCGCGGTGGTACCGACCACCGTACGGTCCACATGGCGTGGTCCCGCACCACCGCTGTCGTCACGTGAAAGTCCTTCCGCGGCCCCCAGCGTCAACGCCTCGAATCCATATGGACGGAGTGACCGCCCGTGGCGTTACACCTGGGGAGACACGCAGGAACGCCCGCCGTGGCGGGGGTTCCTGGGCCGGGGAGGGGCATCTACCAGCCGTCTCCGGCTGTCAGGGACGGTGCCACGGCTCGGTCGGGCGCCAGGGTTCGGGCGCGGGGGGCAGTTTGCTGAACGCGGGCAGAGGAACACGTTCGGCACGGGAAGCGGAGTCCTGGCCGGTCTCAGCCGCGGCGGCCTGGTGGTCGTCGGCAATTCCGGCCGGGATCCACTCATGGCCGTTCCATTCCTGGATGCCGCGCGGCACATCAGGGTCGACGTGGCTTCCTCGTTCTGCCTGCTCCCCGAGCGGGACCGCGCGGCGTTCCCCGGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //