Array 1 368331-367108 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJEPA010000005.1 Streptococcus sanguinis strain CR29 ss_cr29.contig.4_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 368330 36 100.0 30 .................................... TTTCTGTTGTATAAATATTAATATTACCAT 368264 36 100.0 30 .................................... CCAAAGCCAAATCGTCTGTAGTAGTATCCA 368198 36 100.0 30 .................................... TGGGTTGAGTATCATTATGAGTTAGAGGAA 368132 36 100.0 30 .................................... AGGATTTCTCTTGATTTCTTTCTTCATCCA 368066 36 100.0 30 .................................... ACTGAAGCTATTTTAGAGGACAATCCAAAA 368000 36 100.0 30 .................................... AATCCTCTGGTACATCAGAACGCAACTTGC 367934 36 100.0 30 .................................... TTAAACCCGTTTTACTTTGCAAAGACAAGA 367868 36 100.0 30 .................................... AAAATGTATTAAATCAAGTGCTTAAGTATC 367802 36 100.0 30 .................................... CAGAATATTGACCGATAAAATCTTGTTCCA 367736 36 100.0 30 .................................... TATGACGATAGCAAGCTTTTATCCACGATT 367670 36 100.0 30 .................................... AATCCTCAGGCACATCAGACCTTAACTTAC 367604 36 100.0 30 .................................... CTTTATTTTAAAGAGGTTTTACATCGGTCA 367538 36 100.0 30 .................................... GCCAATCTGGAGGTGCTGGTGGACATGTAG 367472 36 100.0 30 .................................... ACGATATATCCCGCATCGATGTCTGTATTG 367406 36 100.0 30 .................................... ATTAGATGGGGATAGATACCTTGAATTGCA 367340 36 100.0 30 .................................... TTCAGCAGGCAGAGGTTAAGCCTCAAGGCA 367274 36 100.0 29 .................................... CTTTCGGAAGTAAATCTATTTTACTTTCG 367209 36 100.0 30 .................................... AGAAAGGCCTCTTATAAGACTAAGAAAACG 367143 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 19 36 100.0 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : GGATAGTTATTTAAACTATAGTGAGTTTATAAATTGTTGTAAAAAGATGAATGAGATGACTATGGATTTACAAAATTTTCACGTTATTAACTTTCTATCAAGCGAGGGATATATTTATATAAATAAAGAAAATATAATGAATGTTAATATTGTTGCGGATTTAGTAGAACACTTTTACGAATTTTCATTTATGTATGAAAGATTTTTTGGTCAATATCCTGCTAATGAGGTACCGGATGAAAAGGTTTTTTTAGAGTCGTTACAAAAAGTTTCATCATATCTTTTTAGTAAGGATATTGCTCATATTAGTTTATCAATTCCAGATATAGTTACTTTGAAAATTATAAATCATTTGTACCAATACGATAAAAAGCCAAGAATTTGTTCTACGATGTCTAATCCGCTATTAATTAAGTTTTTGAATACCTATAATTGACAGGAATCGCAATAGGCATTATAATCAATATATGAGTATAAAAATCACAATTTTTCCATTTGAG # Right flank : AGCTTACTATAGACCAGATAGCGTTGTTCTGTTTTTATTATAGTTTAGGATAGAGGGGAATCTGTAATGTTTTATCATAAAAAGGGCTGAGTAAATCAGTCCTTTTGTTCTCTATTTCCCCAAGCAGAATTGGCTGAAGAGTTGGGTGATGAGTTCGTCTGGTGCGGCGTCACCAGTGATTTCGCCGAGGATTTCCCAGGTGTGGGTCATATCGACTTGGAGAAGATCTACGGGCATACCCATTTCCAAGCCTTGGTTGACGGCTTGCAGGCTTTCTAGGGCTTTTTCAATCAAGGAGATATGGCGGGCGTTGGACAGGTAGGTAGCGTCTTGCTCTACGATACCAGCATTTTCAAAGAAGAGCTGATTGATGCGTTCTTCAATTTTATCGATATTTTGATTGTGGAGGACAGAAATCTTGATGACATCAGTTGGCAGCTGATCCAGCTCAATCTTTTCCTCAAGGTCAGTCTTGTTAAGCAGGACGATACGATTACTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [65.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //