Array 1 3336794-3341080 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP054861.1 Martelella sp. NC20 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3336794 28 100.0 32 ............................ CTGCAAAGTGTAGACAAAGGACGCGCGCCATA 3336854 28 100.0 32 ............................ ACCGGGACCAGTCGACACTACTTTCCGCGTCT 3336914 28 100.0 32 ............................ GCATTGGCCGGCGCGGTGGCCGCGACATCCAC 3336974 28 100.0 32 ............................ AGAGAACAGCAAGCCGCGCGGATGGTATTCAT 3337034 28 100.0 32 ............................ TCGGAAACCTGAAGGCTTCCGAAGCCAAGATC 3337094 28 100.0 32 ............................ GACACGGTCTCGTTCGGGCTGGCGCGAAACGC 3337154 28 100.0 32 ............................ ATTCGACGCAGGGTCATCATCTACACGTTGAT 3337214 28 100.0 32 ............................ GTAGACGGCGATGCAGTCGCGCTGCATCGGCC 3337274 28 100.0 32 ............................ AAGATCGAAGCACTGGAGAAGCAGATCAATGC 3337334 28 100.0 32 ............................ GGTGGCATTGCCCTGACCGGCCTTATCCAGGT 3337394 28 100.0 32 ............................ GATCACGATATCCCGGCTGGTATGCGGCGAAG 3337454 28 100.0 32 ............................ GCTAGCGTCTTCTTTCAAAAGGACAATCGACA 3337514 28 100.0 32 ............................ ATGCCGGCGCGAATTGTCGGAGCATGCAGAGC 3337574 28 100.0 32 ............................ ATAATCGCGGAAGCTGCAAAACCGGATCAGGT 3337634 28 100.0 32 ............................ CTGTCCAGATCTGTCCTGCGCCACGCCCGAAA 3337694 28 100.0 32 ............................ CCCGAACAATTCTCCCGCGCCGCGCTCGAACT 3337754 28 100.0 32 ............................ AAGAATGGCCCTTTTGATTTCGGCTGCCTTCC 3337814 28 100.0 32 ............................ TTTACGCCGGAGGAACGTAAGGCACTCAAGTC 3337874 28 100.0 32 ............................ TTGTATCAATCCGGCAATATTGACATCGGTCG 3337934 28 100.0 32 ............................ TTTGCCGTCTCCGGCCGGTCGGCTGGATCGGT 3337994 28 100.0 32 ............................ TGTCCCGTCGCTTGTGAGATGTATGTTTTTAT 3338054 28 96.4 32 .......................T.... GCGTCGACCGCGATCCCTTCGATTCTGAACGC 3338114 28 100.0 32 ............................ TCGACACGGAAATACTGCCCGCTGGATGTTCC 3338174 28 100.0 32 ............................ TATTGCAGGATCGACGAGGACGGCATCACGCT 3338234 28 100.0 32 ............................ TCTGCCGATTTCCGCAAGGAGCTGATCCGCAT 3338294 28 100.0 32 ............................ TTTTCGGATGGTCTGGCACTTCCGTCCGGCCT 3338354 28 100.0 32 ............................ AGTGTAGAGCTGCAGCATATCGCCCGGTCTGG 3338414 28 100.0 32 ............................ GGCATGGACCTTCACGCCGGCGACAGTGCGGC 3338474 28 100.0 32 ............................ AGGTAGACGTTGGCGGCGCGCAGGGCATTCTC 3338534 28 100.0 32 ............................ TGGCGGGACGCTGACATTCGGCGCGACAATGT 3338594 28 100.0 32 ............................ GATGGCGCGACCGGTAGGGTTAAATTCAGAGG 3338654 28 100.0 32 ............................ GATAATTCTCTTGGTGGCGGCGAGGTCGTATT 3338714 28 100.0 32 ............................ CGGATTGTTTCTGTAACTCTCGATGCGTAATC 3338774 28 100.0 32 ............................ CTGTTTGCGAAACGCGGTCGGGCAGGTCCAGA 3338834 28 100.0 32 ............................ TGGTAGATGCGGTCTGGATCCGGCGCGCCGAT 3338894 28 100.0 32 ............................ ATTACAGAGGCCAGCCAAACAGGACGGCAAAG 3338954 28 100.0 32 ............................ ATGGAAAACGAGCGATTGTTTTCGCGACAGAC 3339014 28 100.0 32 ............................ TTACGAAAGTGGGTTACGGGATTGAGGCGACC 3339074 28 100.0 32 ............................ TTGACGATACCGGCCATTGCATCCTGATACGG 3339134 28 100.0 32 ............................ CTTCGATCACTGCCGCTGCGACTGCCTTGCGC 3339194 28 100.0 32 ............................ TCATGAAGCTCTTTGAGCGCTGCAAGCATGGC 3339254 28 100.0 32 ............................ TTTGAAGGTTGTCATCTCGTTTAGCGAAAACC 3339314 28 100.0 32 ............................ ATCAAGCATGACTGCTCCGGCAAGATTTCATC 3339374 28 100.0 32 ............................ TTGACGATACCGGCCATTGCATCCTGATACGG 3339434 28 100.0 32 ............................ CTTCGATCACTGCCGCTGCGACTGCCTTGCGC 3339494 28 100.0 32 ............................ TTTGGGCTAGAGCAATCCGCCGCCGAGGCGAT 3339554 28 100.0 32 ............................ TCATGAAGCTCTTTGAGCGCTGCAAGCATGGC 3339614 28 100.0 32 ............................ TTTGAAGGTTGTCATCTCGTTTAGCGAAAACC 3339674 28 100.0 32 ............................ TTGAATATTCCGACACGCGCTCGAGGAAGGAT 3339734 28 100.0 32 ............................ TCGATGAAGGCATGCGCCTGGGCCGGCGTTGC 3339794 28 100.0 32 ............................ AAAATCGCAATGTCGAACGAAAGCGGTTATTT 3339854 28 100.0 32 ............................ AACATGGACACGGCTGCCGAGAAGCGCGGTGC 3339914 28 100.0 32 ............................ TGATGCATAACCTGCCCTGGGTAGGACTTGAA 3339974 28 100.0 32 ............................ GGGTATTCCGGACGGATCGACTGGACGGCGGC 3340034 28 100.0 32 ............................ ACATCAAAAGAGACTTCCGCAGACGCCGTGTC 3340094 28 100.0 32 ............................ AGCTTGTCGAGCCAGTATGCCGACTGATGCAT 3340154 28 100.0 32 ............................ CCGGATAGGCTTTGAAACCCGGGTAGGGACTG 3340214 28 100.0 32 ............................ TGATGCAGCGGCAAGGCTTTGCATTTCAGATG 3340274 28 100.0 32 ............................ GCTGGGGAGCCGCTACTAGTCCAGCCTGTGGC 3340334 28 100.0 32 ............................ ACTCATCCGGGGGTCTTTGGTAATCGGCTTTT 3340394 28 100.0 32 ............................ GCGGACGGAAGCGTAGTATACCCGCGATGAGA 3340454 28 100.0 32 ............................ ATGCTGTCCGGCAGGCCGTCCGGGCGATAGAA 3340514 28 100.0 32 ............................ CGCTGTTGATACAGCACCAGAGACCTCAGACG 3340574 28 100.0 32 ............................ CCGGGCAGCGCCGTGGTTCTGATGCCGTTAAC 3340634 28 100.0 32 ............................ ATGCTGTCCGGCAGGCCGTCCGGGCGATAGAA 3340694 28 100.0 32 ............................ CGCTGTTGATACAGCACCAGAGACCTCAGACG 3340754 28 100.0 32 ............................ CCGGGCAGCGCCGTGGTTCTGATGCCGTTAAC 3340814 28 100.0 32 ............................ ACCGGGGAACCAGAAAGTGAGGCTACCATGAT 3340874 28 100.0 32 ............................ ATCAGACCCGGCGTAAATAGACGATCCCGGCA 3340934 28 100.0 32 ............................ TGGCTGATAGATGCGCTGTCCGTCACGACAGT 3340994 28 100.0 32 ............................ TTGTTCTGAGGGATTTCCATGGCTGCGGATCG 3341054 27 75.0 0 ...............-.AT.....ACTT | ========== ====== ====== ====== ============================ ================================ ================== 72 28 99.6 32 GTTCCCCGCCGGATAGGCGGCTGAGAGA # Left flank : CCTGAACGCCCGTTTGAACCTGAAAATGACCCAGACGCGCAGGTTTCGCCGGTCCGAAACCCGCGAAATGCTGTTTGTGATGAACGGAGATCATCTGGAAGATGCGGTCTGGCATCTCGATCTTGCTCCCGGGACCAGCGAGTCGCGGCTACGGGTGGCTGATACGCTTCATATCTGCGATCTCCCTGTCGTCTGTCGTCTGTTCGAGGATATGACAATGCGAGGCTGGCTTGAGCTTTCAGGCGGTCTGTCAGAGATGGACGGTGCGGATATCCGAAATCTGATCAAGGTCAGCATTCCGACCTACGGCGATGATCTGAAAACGGTGATGACCTATACTGAGTTTACAGGGTTCACCCGGGGAACGCCGGAGGATCTTTTTAAGGCCTTTGGGAAAGCATAATGAAATCAATAGTTTGAAATTTCATCATGGAAAGATGGTTTGCCTGAAGATAAACAGCTAACGTTTTGAAAACTCTTTTCTTTCATAAAAAAAGAGA # Right flank : TGCTGGATATATGCCCTTCGTTTTGAGGAGGTTTCTTTGGTTGATCAGATCGTAGGCAAAGATGTCGGCAATACCGATCGGGAAGAATATGCTTGAGGACGTGAATGGCTTCCTGTACGGTAAGCTTCGTTAGGGGCAAGATGATCAAAACAGCAAACGACTTCGGAGCGTTGATCAGGGACCGGCGCAAAAGGCTTGGCTGGACACAGACTGAGCTTGCACGCCGGGCGGGTACGGGTGAGCGCTTCATTGTGGAACTGGAGGCCGGCAAGCCGAGCTGCCAGCTTGAAAAGGCTCTGGTCGTCGCGCGAACGGTAGGGCTCGAAATCGGCGACCTGAAGACCGTTCCAGCCTCTTCCCCGGAGGCGGAGAAGGACGAACTTGGGTTCCTGCCGACTTTCGGTGACGGGCGATGACAGCAATTTACTATGAGACCTTTCCCGTCGGCGCTCTCTCGTTCACGGATGCATGGCGGCTCGACTACGATCCTTCGTGGGAAG # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCCCGCCGGATAGGCGGCTGAGAGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.50,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA //