Array 1 10618-10780 **** Predicted by CRISPRDetect 2.4 *** >NZ_PPAW01000015.1 Campylobacter concisus strain AAUH-12CDrec-a 1102292, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 10618 30 100.0 37 .............................. TATAGATGTTTGGTATTTCAAGTGTTGTGGTTTCGTA 10685 30 100.0 36 .............................. AGCAGGGAAAAGGATCGGTAAAGGGTAAAGACCAAA 10751 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 3 30 100.0 37 ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Left flank : GAGCTAGATCCTCGCATCGGCTTTTTGCACGAGCCAAACTACCGAGCCTTGAGCCTACATCTCGATCTAGCGGAGATTTTTAAGCCGATCTTGGGCGACACGCTTATATTTAATATGCTAAATAAAAAGGAGATCACCGCAAAAGACTTCCAAACGGACGCCGGCAGGATAAAATTTAGCAACGATACCGTGCAAAAGATCGAGCTAAAGTTGATCTCGCGCCTTTGTGAGACGCTCACAGTGGATGGCAGGGAGCTAACGTGGAGGCAGGTGTCCGCCGCGAGACAAATAAGCTCAAGAAGTGCATCTGCGAGGACGCGCCTTATGAAGGATTTAGGTGGGAGTGAAATCGCATTTTGATAAAGCGTTTTTTAAGATTTTAAAATACTTGAAATTTAGGGCTTTGCGTATTTATATGTAGCTAAAATTTAGTCAAATTTAAGGCGAATAAATATAGACTTCTTGAACCAAAAGGTCTATAATATCAGCTTTTTGGTGCT # Right flank : CACTAATGTCTTTAAGTGGATTTTGAAGCTAGGGCAAGATTAGAATTTACCGGTATTATGTAGCATCCGCACAAGACTTTCATTCTAAAATCCGCTAAAATTCAGCCTATTATAGCATATCGTAAAGGATTTATATGGCCGAAACTCACGTAATATCGGCTCTAGTTAGTAAGCACTCCGAGCTTCAAGGAAATATCAAATATTATCAGGATATAGTTTTAAAGCTAAAATCAGAGCTTGAAACCATAGATAAGGCTATTGCGATATTCGACCCTAGTTATAAAACTACGTTCATTCGAGCTAAAAGAATTAGTAATTCTTCGTATTTTCCTCACGGAGAATTAAATTGTAGAATTATAGAATGTGTAAAAATAAAGCCTAGCACTGTAAATGAAATAGCCGAGTATGTTTTTAAAGATGAAAAAGTAGATGACGCTCTTATAGCCAAATATAAGCAAAACATATCCTCTTTAATTTCAAAGCTTATAAAAAGAGGAACT # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 15263-15426 **** Predicted by CRISPRDetect 2.4 *** >NZ_PPAW01000015.1 Campylobacter concisus strain AAUH-12CDrec-a 1102292, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 15263 32 100.0 36 ................................ TCGTAAAAGTGTTATTGTCGGTGCGAAAACTCCAAC 15331 32 96.9 32 .........................A...... CTGCACGATCACTTTAAAACCTTTGTCATCTA 15395 32 96.9 0 .....................A.......... | ========== ====== ====== ====== ================================ ==================================== ================== 3 32 97.9 34 ATTAGAATTTACTCCGTTGGAGTTTGAAACAA # Left flank : ACAAAGATACCAAATCTGAACTTTCATTCTTAAAAAGTAAAGCTAACGAGCTAAATATAACATTTGATAAAAAAAGCAATGAAACATCTATTAGAAGCGTTATCTTATCTCAAATTAATGATATTGCGAAAAGCAATACCGGGGCTCAACAAGTATTAAACGATTACCAAGATAAAATAAGAAATATTTTTGAAAATATTAAAAAAGATAAAAAAGGATTAATAAAATGGCTTTATGAAAATCAAGGCGAGATGCGATTCGGAGCAGAAAATAGATTATTTGTGGTTTTATATGATAATAATAATTATGCTGAATCGTGGAAACTAAAGCGAAATATAACTTTATTATCTCCAGTAATAAATAGTTTTATAGACAATTTTAAACTTATTCCCATTGAATTTAAATTTAAAGGGAAAAATTATAGAACTAATTCAAATATAATTTTTATAAGTAATTAAAAATCTTTGTGCGGATGCTACATAATACCGAAGAATAAACTT # Right flank : ACGCAGAAACGATAAATTTAAAAGTCAAAATTTTCAGAGAAGAGATTTAAAATAATAGATCAGATAAATAATAATTGCTATCTTGCAAAGATATATCAAACTGATGATAATATAGTTTTATGCAGATACTTCAAAAAACCAAAACCCCAGCCAATACAGCAAAAAAAGAAGCTAGAAATAATAATGAAATAGACTAAGCATAAACAAGCTTAATATCAAGAGCATTCACAACCTTAAATATACTTTCAAATCTAGGTTTTGAATTCTCTTTAAACATCTTATAAAAGCTTTCTCTATTTAAATTTGCTTTCTTTGCAACGTTTTCAATGCCTTTTGATTTTGCTATATAAAATAATGCTCTTTTAAATTCTTCAATATCGCCATCGGCCAAGACTTGATTTAAATACTCTTTTCTTAATTCATCAGTTGTTAAATAGTCTTCTAAATTAAATTTAGTAAATTCTTCTTTCATTTATAATCCTTTAAAATTTCTTTTGCCT # Questionable array : NO Score: 2.57 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAATTTACTCCGTTGGAGTTTGAAACAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.75%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //