Array 1 13141-10133 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEHHX010000004.1 Aeromonas veronii strain CN17A0040 Scaffold3_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 13140 32 100.0 34 ................................ TTCTCAGGTGAGGGGAGGGCGAACAGGCGGAAAC 13074 32 100.0 33 ................................ ACGTTGAGATGCTCAAGCGCCTGATTATCGAGA 13009 32 100.0 34 ................................ TGCCATTACTCGCCAGCCAGCTTAACTTTGACCA 12943 32 100.0 34 ................................ ATCATCAATCAGCTCTTCGCTGATCCCGTCTTTT 12877 32 100.0 34 ................................ TCAACAAACTTATCGAGAGGTTCGGTAAGCTTAT 12811 32 100.0 35 ................................ AAGTTCCAGAACGCCGACCAGACCGGACGGAAGTT 12744 32 100.0 34 ................................ GGTAGATTGAGGGCCATTGATTATACTCCGGTAA 12678 32 100.0 34 ................................ TCTTCTCTGGTGAAGGCACAAAAACGCCTGTAGG 12612 32 100.0 34 ................................ GAGCTGGCCCGCAAGGTTCGCCAGCTTAACACCG 12546 32 100.0 34 ................................ CCCCCTTTGGTGCCCGATCCGGTTTGTCCTGCAG 12480 32 100.0 37 ................................ CTCCCCTACCCCGTTCAGCCCTGAGGCTCAAGCGGAC 12411 32 100.0 35 ................................ CCACTCGCTGGTGAACATGTTGACCGACGAGCCAC 12344 32 100.0 35 ................................ CTGGTCGCCGGCGCAACCGGTGGCCATCGATCCGG 12277 32 100.0 34 ................................ AAGGCCACCGCCACCGCCACCGAGGCCGCCGTTG 12211 32 100.0 35 ................................ AAGCTCGACATAGCCGAGTCTGCGACAGAGCTGCG 12144 32 100.0 34 ................................ CGGTCATGGGCCGGATGGTTGAGAGCATCGAGAG 12078 32 100.0 34 ................................ TCCCCTTTGACGAACTGGGCCGATAGCTCCTCAA 12012 32 100.0 33 ................................ AAACTTACAAGGTAGAGGCCATCGAGTTTCATC 11947 32 100.0 33 ................................ ATTGCCGTAATTATTAGTGTGATTACTGCGTAG 11882 32 100.0 35 ................................ TTTGCTAACCCAGACGGTGGGGAACTCCAGCAGCT 11815 32 100.0 36 ................................ AGCGCATATGGCGCCCTGAGGCCGCTGGCCGCGCCA 11747 32 100.0 33 ................................ TGCTCGGATGTCGCCTTGATCTCTTTGTTGCTG 11682 32 100.0 35 ................................ TTTGAGTCCGTAATGCGCCGCGTTAAATCCAAGGG 11615 32 100.0 33 ................................ TGGTTGTACTGCACCGACCCAGCAACCCACATC 11550 32 100.0 34 ................................ ATGTCAGCGCTGCCGAACTAAGCAGGAGGACTGG 11484 32 100.0 33 ................................ ACTTCGAGCGATTCGATAGCGTCGGCGTATGGT 11419 32 100.0 35 ................................ CATAATCATGTAGCATTAGGCTCAATCGGGCAGAT 11352 32 100.0 34 ................................ GGCGTAGACGCCAGCTATTTACTGGGGCTGACCC 11286 32 100.0 34 ................................ TGATTACCACTGATAGCGGGCGAGCAATCGACGT 11220 32 100.0 33 ................................ TCGGCCAGCGGCTTGAACTCGGACGCACCGGCG 11155 30 87.5 36 ..........GT--.................. TCAATACCGGCGTCTCCGTAGTGGTACCGGCAACCA 11089 32 96.9 34 ............G................... ACGTCGCGATGACGTTAAACAAGGCCGCTGGCCT 11023 32 96.9 34 A............................... TCCTTCTCAAGGTCGGCGATGCGGGCCTGCTGGT 10957 32 93.8 34 ...........TG................... AACATAACCCCAAACATTATGCGCAATCACCCAG 10891 32 90.6 33 ...........TG......T............ TGGCCAGCGGCCCGCCCTGCCCGTATCGCTGAC 10826 32 93.8 34 ...........TG................... ACGCAGCACCTCAAAATGGCCGCCGACCGTGACG 10760 32 93.8 35 ...........TG................... ACCGACATCAACCTCAACGCCAAGACCGTGAGCAA 10693 32 100.0 33 ................................ ACATTGGCAAGAATCGACAGAGGGTCAGAGATG 10628 32 93.8 34 ...A........G................... CCCGAGCTGATGAAGCTGGATCGCAGCCATCGCC CT [10616] 10560 32 90.6 34 ...........TGT.................. CAGAACTGCACGATCACAGGGTTATGGGTGGCCC 10494 32 100.0 34 ................................ TTGTTGTTGTGCCCGGTCGAAAAGGTCGGTCATT 10428 32 90.6 33 ...........TGT.................. ATCATGCATATTACCGATGCGGTGCAGAACGAG 10363 32 100.0 34 ................................ TTAGCCACGTACTTGGAGCAGTAGCCGACAGCGG 10297 32 93.8 34 ...........TG................... AAGTTGGGGTTTGTGGGCTGGGGTGTGGGGGCTT 10231 32 93.8 33 .........T..G................... AGGGCAAGGCTTGTCGCCTCACTGGGGTTAAGT 10166 32 90.6 0 ............G..............A...T | T,T [10135,10155] ========== ====== ====== ====== ================================ ===================================== ================== 46 32 98.0 34 GTCGCGCCCCCCACGGGCGCGTGGATTGAAAC # Left flank : GCCCTATGTACATCGGTGAGGTAGTACAGCCATGATGATATTGGTAACCTACGATGTTTCTCTGGAAGATCCTGACGGGCCTCGGCGTCTGCGCCATCTGGCAAAAATCTGTCTGGACTATGGTGTGCGCGTACAGTACTCGGTGTTTGAATGCGAAGTGGAACCAGATCAGTGGGTGCGGTTTCGGGATCAACTGTTAAAGACCTATGATCCGGATGTCGATAGCCTGCGTTTTTATCGTCTCGGAAAGGAGTGGCGCAGCAAGGTGGAGCATCATGGTGCCAAACGCGCCCTAGATATCTTCAAGAGTGACCTGATTATCTGAACGCCAACCGCTAGTGCTCATTAAAAATCCGGAATATTGGCATTTTTTAACTAATTGATAAATAGCGATATATTGAAAGGCCGCCTTTCGGGATCGTCTATTTGTGATCCAACTGACATGGGTTGGCGCAGAATACCGTTTTCCGATAGGCGGTTTCTGTCTTTGCAAGAAGACG # Right flank : GGATGTGAGGCGGTGATGTGGTTAGATAGGATCTGGATATTCAAAGGGCCAATCTAGGATCATTGGTGCGCCTCACCTGAAAAAATAAAAAGAAAAGGGTTCAGCAAGGCCGAAGGATAGCTTCGGATGAACCCTTATTCGTTAGGCAAGTACCCCTCTCTCGGCCAGCGACACGATGCCTTCGCCGCCCACAACTAGATGATCCAGGGTGCGGATATCCACCAGTGCCAAGGCGCTTTGCAATCTTTGGGTGATCTCGATATCCGCTCTACTGGGTTCCGGGGGGCCGGAGGGGTGGTTATGCACCAGCATCAGAGCTGCAGCATTGAGCGCCAACGCACGTTTAACTACTTCCCGTGGGTAGACGGAGGCACTGCTTAGCGTACCGCGAAACAGCTCCTCATATGCCAAGATCCGATGCTGGTTGTCCAAGAACAGCATGGCAAATACTTCATGCTCTCTGCTCTGCAACAGGGTTTGTAGTGCATGCTGTGCCAAGT # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCCCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCCCCACGGGAGCGTGGATAGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-7.90,-8.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [26-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //