Array 1 5289-5498 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOFO010000624.1 Streptomyces buecherae strain AC536 AC541_final_(3245864..3254332)_consensus, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5289 29 100.0 32 ............................. GGGCTGCGCGTGCGCGGGCAACGCCTGGTCCT 5350 29 96.6 32 .........................C... CCGGTTCCATCCAGGTAGTCGGCGCGCACGGT 5411 29 96.6 30 .....................A....... GCGCGCGCCGGTCACAATCAACTGCTCAGG 5470 29 93.1 0 ........A................C... | ========== ====== ====== ====== ============================= ================================ ================== 4 29 96.6 32 CTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : TACCTCCTCTACCGCTGGGCCCTGCGCCGCGACTGGCGCGCGGGCGCCATCCTGGGCGCCACGGCGGCCGGCCTGCTGCCCTGGTTCGCCTACCAGGACCGCACGATCTTCTCCTTCTACGCGGTCGTCTTCATCCCGTTCCTGTGCCTCGCGGTCGCCATGATGCTCGGCGCCATCATCGGCCCCCACGCCGCCACCGAACGCCGCCGCACCGTCGGCGCGGTCGGCGCGGGCGCGCTGGTCCTGCTGATCGTGTGGAACTTCATTTACTTCTTCCCGATCTACACCGGGCAGGTGATTCCGCTGGAGGCGTGGCGGGATCGGATGTGGCTGGACACGTGGATCTAGGCGGGCGCCGCTGGTGGGGGCCGCTGGCGCTGGGCGGGCGCGGGGGCGATGGGAGGACTATGCCGGCTTTTCTGGGATTGGCCGATAGGTCGCGATCGGCGAAAGTTGCAGGAAACCGGGCTGTCGCCGGATAAACCCGCAGGTCAATTGCT # Right flank : CATCGACGCCGGCCTCAACTACGACGAAGCGGCAGCGACGACAGCCGGACCCCCGACAGAGTGTCAGTGGGATGGTCTACCGTCCGACGCATGGCCACCGACGCGCTTCCCATCAGGCCGGGTGACGTCCACACGCGCGAGGAGATCCAGCCCGTGCTGGGCGGCAGCCTGTACGGCGGCATCGTCCCGTCAGACGAGAAGGCCAACGTGCTGCTGTTCTCGTACGCGCGGGGCGGGGCCAGGTTCGGCTACCACGACGGCTGGCTGCGGGAGGAGGACGAACTCGGGCCGGTCTTCGAGTACACCGGCGCGGGCAGCGGCGACCAGGTCTTCGGCGGCCGGTACGGCAAGGGCAACTCGGCGATCCTCGGCCACGCCGACAGGGGGCGCACGCTGCACCTGTTCATCGCGGTGGGCACGGTGCCCGGCGGCCGGACCAAACGACACCGCTACGTCGGGGCGTTCACGCTCGACGTAGCCGAACCGTACGTGGTGCGGCG # Questionable array : NO Score: 5.38 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-13.20,-13.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 832-194 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOFO010000225.1 Streptomyces buecherae strain AC536 AC541_final_(3679498..3681749)_consensus, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 831 29 100.0 32 ............................. TCCGAAGCTCGGATGGTGGGCAGGCTCCACAG 770 29 100.0 32 ............................. GCGCTGGAGCGCGGCGACCACACCGGGACGCA 709 29 89.7 32 ..G.....T....A............... GGCACACGGAGGGTTCGGGTCTGCCGATCGGC 648 28 82.8 32 ...........C.C..T....-...A... GAATGAAGAAGCAGGGCATCTTCAATTGGTCC C [640] 587 27 89.7 32 ..............--.....C....... GCTTACGCGTGGCTGCAACTGGAGGGCTTCGT 528 29 82.8 32 ...........C.CC..A..........G CCGCTGCCGCCGATGATCAGGGCCGTCATACC T [504] 466 28 82.8 32 .GT........C.-.......T....... GAGGTGCAGGCCAAACTGGCGCTGGGCCTGGA 406 29 75.9 32 GGT..........AC......T...T... GTCGGTTACTCGGTCAGCTCCGGGATGCGTGG GA [394] 343 28 75.9 31 GC.C.......-.........T...T..G GCCGTTGAGCAGGCGCAGGACGAGAGCGAGC C [329] 283 29 82.8 32 AG.........A..C......T....... TGAGAGATCAAGGCCAAGAACGGCACCCCGTC C [279] 221 28 75.9 0 GA.........-..C......C...GG.. | ========== ====== ====== ====== ============================= ================================ ================== 11 29 85.3 32 CTCGTCCCCGCGCGTGCGGGGGTGGCCCC # Left flank : CGTTGGAACTCGGGCGCGCGGGCGTCGACTTCCGCGCGATCGGGACGATCAACGCGGTGACTACGGGCCGACCGGGTGAGGCCGCGAACATTCGATGCCCCGTGTGGGCCGGGGTGGGGTCGGAGGACCCGATCATGCCGCCCGCGCAACGGGAAGCCTTCACTGCGGAGATGCAGGCCGCAGGCGTCGATTGGCGACTGGTGGTCTACGGCGGCGCCGAGCACGCCTTCCACCACCCGCCGGTCGACCACGCGGTACGCCCAGGCGTCAGCCACCACCCGCTGCACGCGGAACGGGCCTGGCGCGATGTTGTCGGCCTGCTCGCCGAGTGTCTGCCCGTGCCGGAGTGATGTGTGGTCGGTAACCGGGTCTTCGGCGGGACGCTGGCGGGATCGTGCAGGGGGGCTGTGAGTTGCTTGTCTGGCTTGGGCGATAGGTCGGAGTTCGCGGAAGTTGCAAAAAACCGGGGTCGGGCGCGGTAAATCCGCAGGTCAATTGCT # Right flank : CGGCGCGTACCGCAAGCCGGGGCCCGCACGCAGGCTTGCCCTCCGGCAGGCTCGGGCACCCAACGGCTCCCGCTGGCCCGCAAGGCTGGACTGCCCCAGCAGTCACACACACAGCCGATGCCCACCCACCCAGCCAAAGGCCACCCCTACACCCGAAGCCCGCCCACACATCCGAAACACACCCACCCAACAAG # Questionable array : NO Score: 4.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.26, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.32, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCGTCCCCGCGCGTGCGGGGGTGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGCCCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [22-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 162-434 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOFO010000103.1 Streptomyces buecherae strain AC536 AC541_final_(4421277..4422459)_consensus, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 162 29 100.0 32 ............................. CTCCAGAGCCTGGCCAAGCGCCGCGACGCGGT 223 29 100.0 32 ............................. TGGGCCTACGCGATCACCCCTCTTGGGGGTGT 284 29 93.1 32 ............T..........T..... TCGGAGGACCCGCAGACGGTCTGGACCCGCGC 345 29 96.6 32 ....................C........ ATCATCGAGACCGAGGCGCGCGCTGTGCCCCT 406 29 69.0 0 T...........GTT......T...GGTT | ========== ====== ====== ====== ============================= ================================ ================== 5 29 91.7 32 GTGGTCCCCGCGCGAGCGGGGGTGGTCCG # Left flank : GTGGCCCGCTACTCGCGGGATGGGGGCGGCTTGGGTCATGCTGGACCTCCAGTTGAGTGCTGGGTGGGGCGGCCCGAGGCTTTGGCGAGACGCGGGCTGCCCCGTTTGCTGAGTTGGGTGAAGAGCTGGAATGGGCGCTGTAACGTCGCAGGTCGCGAAGGG # Right flank : TCTACTGGGTGGCGATGACGGTGGTGCTGGCGCGCGTGTCCGGGCCGGGCGTCCGGCGGCTGTCCGGTGCCTGTCCGCTCGCCCGCGTACGCGCTTTGACCTAAGGAAACGGGCCCGCAAGTGCGGCCGGACGGCCACCGGACGCCCCCGAGCGGCGTTCGGTGGCGTCCGGAACGCGTCCGGGCTGGTCAGAGCCATCCGGTGGTTCGTCCGGTGGCGTCCGGTGTTAGGCGGCGGCCAGTTCCGGTTGGAGGAGGAGGAAGACACCGGGCTCCTCGTCATCGACGAGGTGTTGGCCCTCGTCGGCCAAGGAGTTGAGCTGTTCGGCGACCCAGGTCTTGCCGCGGCCGATGCGGCCCGACTCCCAGTACGGCCTCAGGTCGCGCAGCCGCACCGTGTGGGCGCCGTCGGCGCGGCGTTCGTCCAGCACGGCCAGCAGTTCCGCCAGTGCCTGCTCGGTGGTGCGCTCCGTGCCGGTCGCCGCGAACTTGTCGCCCTTG # Questionable array : NO Score: 5.57 # Score Detail : 1:0, 2:3, 3:0, 4:0.59, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGAGCGGGGGTGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCTCCCCGCGCGAGCGGGGGTGGTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 235-448 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOFO010000782.1 Streptomyces buecherae strain AC536 AC541_final_(4045643..4060854)_consensus, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ============================== ================== 235 31 100.0 30 ............................... TCCGTGCGCCCGCATCGGGCCCGCCATGGC 296 31 100.0 30 ............................... GTCGTCCCAGTTCAATGGTTCCGGCGGTTG 357 31 93.5 30 .............................CT CGACATCGACCACATGGTGCCCCTGGCCGA 418 31 96.8 0 ..........................G.... | ========== ====== ====== ====== =============================== ============================== ================== 4 31 97.6 30 CTCTGGTCCCCGCGTGCGGGGATGGCCCCAC # Left flank : GGGCGGGGAGCGGGAGGCGGAGTGAACTTCCGTACGCGGCCGGGGTGATGATGGTTGGCTAGCGGGTGCCGGTTCCGTGCGGACCATGGGGTGTGCTGGACGGCCGATAGCCTGAGCGAGGACCGAAGAACGCGAGGTTGGCGCGCGATATGGTGTCAGATGTACGAGATGTCGGGATCGCAGGAAGTTGCAAAAAACGAGGTGGGGTCCCGGTAACGTCGCAGGTCAATTGCTC # Right flank : CTTCCAGCTCGACGGCTTTCCCCAGCTCGTCTTCTGTCCCCGGAGGGTGGCTGCTCGCCAGTCCCCGCGCGCCACTGCGACTTCCATCGGGCGCCGCGCCTCACATGGTCCTATCCCGATGCGCTCGCTGTCTGTCATGCCAGCCGTCGATGGCGGTGACGCGAGCCAACGCTGCTTGGTGTTCGTCCTCCGACACGACACCGTGCTCCACTTCGAGGCGTGCGGCCAGCTCGCGCAGTCGGTTCATGTCGTCCTGGTGAGCAGCGGCGGCAGCGATGTAGTCGGTCACCCCGCGCGCGCCGGGGCGTAGTTCGATCGATGCCACCGACTCTTCCGGCACGGTGATGGTGATCTTTCGAGCAGCCATACGTTGAGGATGCCATGTGATGTCGAGCTTGCAATCGGCGTAAGACATACACGTACCGGCGACACAGAGAGAGCTGATGCATCACAGCACGTGGAGGATGCGTCGGGCTCGGAAGCTCGCGGGAGAGGCGGTG # Questionable array : NO Score: 2.74 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTGGTCCCCGCGTGCGGGGATGGCCCCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.60,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 3345-3191 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOFO010000650.1 Streptomyces buecherae strain AC536 AC541_final_(5114217..5123304)_consensus, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 3344 29 100.0 32 ............................. TGTTCCCGGGTCCGCCGATTGCTTCGCACCGT 3283 27 93.1 37 ........--................... CGACCCGACCCGACCCGACCGACCCGCCCGACTGTTC 3219 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ===================================== ================== 3 29 97.7 35 CTGGTCCCCGCGCGCGCGGGGATGGTCCC # Left flank : CTGAGCAGTCACCGGAACCCGAACCGTCGCAATCCATCACCGGCCAACACCAGCAGGCTCAACGCTGGTGCACCAGACACGCGGCCCGCGACCACCCCGACGGACGCCACCTCCGCTACACCGCCCACGTGACCTTGCGGTGGCTGGTCACCCCCGGTGAGGACATCGGGCCGAGTGCTGATCCGTAGGCGGGGTGAGGAGGCAGTGCGTGCTGTGGTGTGGGGTGCTGGCGCCTGCGGCGGGGAGCGCATTGGCGGGCGGGTCGGGTGGCCGTGGGCGACGTTGGGTGTGCCGCCTTGCGAACGGGGTCAGCCTGGCCGGCGAGTTGGTGGCCCAACATTCTTGTCCGTCAGCCTCGCGCGTGCGAGCGCAGATAGTCTGTGAAGCCTGCTCAGCAAGGGGGCGTTGTGGGCGATCTACCGAGTTTGAGCGATAGGTCGGAGTTCGTGGAAGTTGCAAAAAACCGGGGTCCCGCGCGATTAAGCCGCAGGTCAATTGCT # Right flank : CCGCTGACAGATGTCCTCCGTACGCCAGGTTCCTGGGTCCCCCCGCGCGCGGGCCCCCCACCCCCACCCGAGGCTCAATCGAGCCCCGCTCGTGTCGCCCGCCCCGCGTTGCGTGACTCATAGGGCGGCAGCCACCCACCCGGTACCGTGGTCCGAATGACCACCTCGCGGGATCGAGCGGCACGCAGGACCCGGGGAGCCGGGCAGCGCGACGGCGGCGCCCGTGGGGCGCCGCGCACGCTGGCGGAAGAGTTGCGGGGGCGCCCCGACAGCGCGCTCGAACTGTTGCTGCGCGCCCGGCCTGACCTGCTCAACCCGGTGCCGAACGACCTCACCCAGCTCGCCACCAGGGCGGGCACCCGGGCATCGGTCGTACGGGCCGTCGAGCGGTTGGACCGGTTCGCGCTCCAGGTAGCCGAGGCGCTGGCCGTGGCGCCCGACCCGTGCCCGTACGAGACGCTGCGCGACCTGCTGACCGGCGACCCCGACACGCCCCCGGA # Questionable array : NO Score: 5.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGTCCCCGCGCGCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [2,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGATGGTCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.77 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 13100-12949 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOFO010000862.1 Streptomyces buecherae strain AC536 AC541_final_(5527251..5548826)_consensus, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 13099 29 96.6 32 ............................T CGCCGCGCCGACGCTGCGCACGACCCGCACCG 13038 29 100.0 32 ............................. GGCTTCCGGGCGCTTTCGCTGACGCGGTGGGC 12977 29 89.7 0 .....................GCA..... | ========== ====== ====== ====== ============================= ================================ ================== 3 29 95.4 32 CTGGTCCCCGCGCACGCGGGGATGGCCCC # Left flank : CCGCCGCGTGTACGCGCGGCTCCGTACGCTGAGCTCATGGTTGAGAACACCGTGCCCGTACGGGAAGCCCGCGCGCGTCTGGCGGACTACATCAACCGGGCCGAGGAGGGCGTTCCGACCGTCATCACGCGCGACGGCGTATCGGTGGCGGCCCTGGTCCCGATCTCGGACCTCGAAGCGCTGGAGGAACTGGAGGAAGCGGCCGACGTGTTGTTGGTGCATGAGGCGGAGGCGGTCCTGGCCGAGGGCGGGCCGACGGCGACGATGGCCGAACTACTGGCGGACCTGTTCAGCGAGCGCGGTGCGGGCGCGGCGTGAGGTACGCGTTCGGGTTCACTGCGGCAGCGCAGTGGGGGCCTCGGGCGGCACCGTGGGCTGAAGGGCCTATTCGCTCGTATAAACCCTGCGTGAGCGATTTGGCGAGATGGGGCGATAGGTCGCGATCAGTGGAAGTTGCAGAAAACTGGGGTTCCGCGCGCTAAAGCCGCAGGTCAATTGCT # Right flank : CGGGCGCCGACAGCACCCCCGGCAGGATCGCCGGGGGTGCTGCTCGTTCCGCAGGTCACCTTGCGAGTGTTTTACTCACATTCACCGTGGTCAACGACCATGATCACGGGAGGCGCAACTGTGCGCGATCCCGTCCAGAATGTCGTGCTCGCTCACGACCACCTCGCGCGCGCCCGCGCGTTCCATTAGGGCCAGCAGGACGAGCGCGCCCGCGCCGATGACGTCCACGCGGCCCGGGTGCATGACCGGGATGGCGGCGCGTTCGGCGTGGGTGGAGTGGAGGAGGCGGTCGGTGATCTCGCGGACGCGGTCGAGTGGGATGACCGCGTGGTGGATGGCGGCCGAGTCGTACGCGGGCAGGTCGAGTGCGATGGCGGCGATCGTGGTGACCGAGCCGGCCAGGCCGACCAGGGTGTAGCCGCCGTCGGCGGGGCGGAGCGGGACCGTCTGCTCGACCGTGTCGAGGGCGGCCTCCACGTCGGCCCGTATCGCGGCGATCT # Questionable array : NO Score: 3.94 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGTCCCCGCGCACGCGGGGATGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [2,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [20.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 13710-13921 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOFO010000920.1 Streptomyces buecherae strain AC536 AC541_final_(6023654..6065527)_consensus, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 13710 30 100.0 31 .............................. ACGCATGGTCGAACGACGGAACCCCCGCGCC 13771 30 100.0 31 .............................. GGAAGGACCCTCCCGCCGCCAGCGGGTGGAA 13832 30 90.0 31 .....................G.A.....C TTGTCATGCCGACGGGTGCCCGCGTGGAACA 13893 29 76.7 0 .....T...-....C..........G.ATG | ========== ====== ====== ====== ============================== =============================== ================== 4 30 91.7 31 CTGGTCCCCGCGCGTGCGGGGATGGACCCA # Left flank : CGCTATCACGAGTACGGCGGTGCCGAGACCCTCGTGGTCGAGCAGGCGCCGACCCCCACCCCGGCCCCGGCGAGATCCGCGTCCGGGTGGCGGTGGCCATCGTCAACCCCGTCGACTGGAAGGTACGTTCCGGCGCGGTGCGCGACCTGCTCCCCGTGGACCTGCCCGCGATCCCCGGGCGCGACGCGGTGGGCGTGGTGGACGAGATCGGCGCGGCCGTACGGGGCGTGAGCATCGGCGACCGCGTCTTCGGCCTCGGCGGCGTCACCGGCGCCACCGCCGAACTGGCCGTCCTCTCCGCCTGGGCCCACGCCCCGGCCACCTCGAGGGCTGGGTGTCGTTGCGTGGCGGCTTCGCGCATGGGGGTGGGGATAGCCTGGGGAGTCTGGTGAGTGAGGGGGAGTGTTATGGGTGTTCTGCGGGACTTGGGTGGTAGGTCGAAGTTCGCGGAAGTTACAAGAAACCGGGGTGGCGCGCGGTAAAGGTGCAGGTCAGTTGCC # Right flank : GCGAGAACCCGAGCCTGGCCTCCCGTATTCGCCCCCGTGCAGGCAGACCAGCGAACTACGAGCCCGAAACGAACGCCTTTGTCTCGGCAAGCGCCGCGTCCCACGGAAACGGACGCTTCTGGCCCGGCTCGTTGAGAACGAACCCGCCGTCCCCGTACAACACGCTGACCCCTACCGCACGCAGCTCCGCGACGGAGCGTGCGAACTGGGGATGCTGGGCGTACGCCGAGTTCACGCACGGCATCGTGATCAGCGGAATGCCCTTGCCGATGCCCTCGGCTACGACACCCACCGGAAATGACGAGGTCAACCCTAACGCCCAGGCGTTGATGCTGTTCATGGTGATCGGGGCGAACAGGATGGCATCGGCTCTGGGCCAGACATCAGCCTCACCCGGGCGCTTGTACCGAGACCGTACGGGGTAGCCGGTCAGCTCTTCCAGCTCCGCCGCCGCGTCCGCCAGCCAGTCCGCAGCGGTCGGCGTCAAGCCCGCGCACACG # Questionable array : NO Score: 5.45 # Score Detail : 1:0, 2:3, 3:0, 4:0.59, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGTCCCCGCGCGTGCGGGGATGGACCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCGTGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //