Array 1 89247-92402 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMAN01000010.1 Melghiribacillus thermohalophilus strain DSM 25894 Ga0244698_110, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 89247 33 100.0 35 ................................. ATTCTGTATTTATCAGCTTGAATCAAAGCATCATT 89315 33 97.0 32 ................................G CAAGCCACAGAAGGCGGCGGTGCGACAGTAGC 89380 33 100.0 32 ................................. TAGGTGACCTCTTGTCTCAGCAGGTGCTTAGG 89445 33 100.0 33 ................................. CTGTGTGCGTATGATTTGGAATTGTTACGTCGT 89511 33 97.0 33 ................................C TTTTTCGAGATCGAAGTCACACACTTGTTTAGC 89577 33 97.0 34 ................................T TGAAAATAACGATGAAACCAGTCCTGATTTCGGC 89644 33 100.0 34 ................................. GAAATTGCGGTTATGTTTCAAACGGACATTGAAA 89711 33 97.0 33 ................................C AGCGTTGCCTATGAAGGATTACCGGCCACACTG 89777 33 97.0 33 ................................C GTCCTGGATAGGTGAGAAAACCATCCGTATCCG 89843 33 100.0 33 ................................. CTCTACACACCTACCAATCTATGATTTAACTTT 89909 33 100.0 32 ................................. ATCCCGCTCGGATTTGGTCCGCTAAAAGAACC 89974 33 100.0 33 ................................. TCGTCAAAAATAATCAATAGATCTTCTGTATAG 90040 33 97.0 33 ................................C ATAATTATCACCCCTTTTATATATTTTTTATAT 90106 33 97.0 33 ................................G TGAAACAGGATTCAACACCCCGGTTCGGTTGTC 90172 33 97.0 34 ................................C CAAAGATAGACTTCCGGCTGAACCAGTGCTATGA 90239 33 100.0 34 ................................. TCCGGCTTTTGCGGCAGTTAGATGACAAAACGCC 90306 33 100.0 34 ................................. TATTGCCCGCCTTTATGGCTGCTGGATATATAGT 90373 33 97.0 33 ................................C CCGTTCACAAAACGAAGGGAAGCACTAACCCCG 90439 33 100.0 33 ................................. TAGAAATAGAAAAGCGATACCGAAGACAAAAAC 90505 33 97.0 35 ................................C CACACAGTATGGGGAAGAAGCCGCTTTGCCAAAAG 90573 33 97.0 34 ................................C ACTTATACGCGGCCTCTGAAACCGTCATATAATC 90640 33 97.0 32 ................................T TACAATCTCTGCGGCATCGCAACAATGGAAGT 90705 33 100.0 31 ................................. TCTGGATCTACCAATACTACCGATAACTACG 90769 33 100.0 34 ................................. TGCGAATGTAACGGTGGATAGTCCGACAAAAGTG 90836 33 97.0 34 ................................G CAAATAAAGGTAACGCTGAACGTCTGGCGGACGA 90903 33 97.0 33 ................................C AGAGTCACGGTAGATGGGCGAGAGATGTATGTC 90969 33 100.0 33 ................................. GCCGAGCGGAGTGAGCCACGACTTGCCAAAGGC 91035 33 97.0 33 ................................G TAAGGAAGATCTGTCTTTACACCAGTTGATTGT 91101 33 97.0 33 ................................G TTTGAGTCTTTTAACGCCTGGTTATCTACTGCA 91167 33 100.0 35 ................................. ACCCAATCCTGCTTATTTTGGGCTTTCGCCGCCTC 91235 33 97.0 33 ................................T TTTAGCAAAGACGGTGAAAATGGGGCTGATGTG 91301 33 97.0 33 ................................C CCCAGTTTTTGATGGCGATCTCCCTGGTGTCCG 91367 33 97.0 33 ................................C AGAGTCACGGTAGATGGGCGAGAGATGTATGTC 91433 33 100.0 35 ................................. AAAAAAAGAATATGCTTTAACACAAGATGCATACA 91501 33 97.0 34 ................................G GACATTATGCTCGTGCAGCGTTTCCCGGATCTCC 91568 33 97.0 33 ................................T TTTAGCAAAGACGGTGAAAATGGGGCTGATGTG 91634 33 100.0 34 ................................. AAAAAGCGATCGGATACCGGGTCATGAAAATCCC 91701 33 100.0 34 ................................. AGGACAAAGGCTGGAAGCCCCGCAAAACAAAAGA 91768 33 97.0 37 ................................C GGTTGCGCCGGTCATGGTATTTAGACCTGCAAGTCGC 91838 33 97.0 34 ................................T AAATAATCTACTAAATCAATACGATCACCATCAA 91905 33 100.0 33 ................................. TTTCATACTCTGAAAATATTAAAAAGCTGGGCA 91971 33 100.0 33 ................................. TCAGATACTACAATTACACGGTCGCCGACTTGC 92037 33 97.0 34 ................................T CCCATGAGTGGGATGTGCCGTCACCTGTGTACTT 92104 33 97.0 35 ................................C CAAAGACTTTTACTACGCCTGCTAATACATCAAAA 92172 33 97.0 35 ................................C TTTCAAGTTGTTTAGTATTTGTAGTGCCTGTGCTT 92240 33 97.0 34 ................................G AAAAATGCTGCGATCATGCCTGTTACGTAATCTA 92307 33 97.0 31 ................................T AGCCTGTTGATCTATTACGTGTCTCATTTAG 92371 32 90.9 0 ...........................-..T.T | ========== ====== ====== ====== ================================= ===================================== ================== 48 33 98.1 33 GTCGCACCCTACTTGGGTGCGTGGATTGAAATA # Left flank : TTGGATGGATATCCTCCGTTTTTCTGGAAGTAGGACTGAATTATGCTAGTTGTCATAACATATGATGTGAATACTATGGATTCGGCTGGCAAAAAGAGGTTGAGAAAAGTTGCTAAGGTATGTCAGGATTATGGGTTGAGAGTACAAAACTCCGTCTTCGAATGCAATGTTGATTCCACAAAATTAAAGGAACTTAAATATAAACTGGAGAATTTAATAGATAAAGATAAAGATAGTCTCAGATTTTATAAACTTGGGAACAATTATAAAACAAAGGTTGATCATATTGGTGCTAAGGAAACAGTTGATATGGATGATCCATTGATTATCTGAACTATAATGGTGCGGATAGGAAGTGAACATCAAATCCCAGGGGTATTCGCACCAGAATAACAAGTAAATTATGAGATTTATAGTGGATTTCTTGAAGAATATGGAAAGGAGTTGTCGAGATGTTGTTTCATAATTCGTAATAAGGATACTTTTACACTATTTTCGCT # Right flank : TCCCTGTGGAGATATACAACAAATATTAACTTTTACGAGTTAGACACCATTTAATAGTTTATAAATTATTAGGTATGCCAGAAATGGTATATCTCTTTTATTATTTTTATGCTCATTTATACAGCTTGGTAAAATCAGAGTCAAATCATTCCAGGTCACACAAAAGTAACAGCTTCACAAACATTCCTTTAGTTCAGTATTTAAAAGAACTGCTTGCAGAAGATTTTGTAACATTTCAAAGTGATGAAATCTTTTTCTATACCATTAATCTGCCACAAGTATACACTGGAGGCACCTTACATTTTCGACGATCTCTAGTTATACTTTGAAAGATCATCTGACAGTTGGGAGCTAAACTTTCACTATTTTTAATTTGAGTGTAAGTTCCATAAGAATTTCTATTTTTTAATCAGGAAAAGCTGTAAATGTACTGAAGTTTCAACAAATAACGATATGATATGGTAAAATATAACTAAATATTTTGCCAATCCAATCCTAAA # Questionable array : NO Score: 5.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.54, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTACTTGGGTGCGTGGATTGAAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.50,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //