Array 1 40908-41302 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJKX01000137.1 Escherichia albertii strain YS-F13-1a entry137, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 40908 29 100.0 32 ............................. TAGGTTAAAGCGATCTTCGGCATAGCTGAAAA 40969 29 100.0 33 ............................. AAGCCCGTGAGCAAATTGATGCAAACTGTAAGC 41031 29 100.0 32 ............................. GGACGGGATAGTTGACTTCGGTGAGGGGTGCG 41092 29 100.0 32 ............................. CCACCGCTATTTTTTTGCGTCTGTTTCTGTCC 41153 29 93.1 32 ......T......C............... TTGCTTGAAGGTGAACTGGATCGGAAAACAAC 41214 29 96.6 31 .............C............... GACTCGCAATCGCCAGAAGACGCGATCAGTT 41274 28 89.7 0 .............C.........-....A | A [41276] ========== ====== ====== ====== ============================= ================================= ================== 7 29 97.1 32 GGGTTCCCCGCGTTAGCGGGGATAAACCG # Left flank : CTGGATGAGCTATTGGCAACGCTGACCGATGATAAACCACGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAACTGGCGTTTGTCGATGCAAACACATAAATATTTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGGACCTGTAAAAACTTCCACTCATTTATATTCTTTGTCGCCTCTGAAATTCCTCCATTTTGCCTATCCTGGACTAATCATTGCCATTCTCTACAAATTCTGTGGCGTTAATTTTTCGTTGGAGTGAAAATTATTGCGGTAGAGTTTGGTGGATTTTAGTTTGTATAGAATCACTTTAAATATTTAACTTTTCACTCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATCCTGTAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA # Right flank : ATTCAGGTATGTTCAGGCCGGGCAGTTTCCCGCCCGGTTTTCCTCATTTAGGCATTCGACCAGCTCTGGATTGAATCCGCATTCCCTAACTCACCATGCATCACTTCATACGATTTTTTCAGAATCACATCGGTGTGTTTGGTTAGGTCTTTGAAAATGCCTTTATTCATTGCGTCGTAGCGTTTGGCATTGCTCTCAACAGGCATAAAGACATCTTTCACGCGAACCATTTTGTCGACAGCCGTTGCGTAATCTGGATATAACCCCAGCCCTACCGCCGTATTGATCGCCGCTCCCAGGCTTGCACAGCCGTTAATGGCATTACGTCGTGCAGGAAGGTTGAATACATCGGCAAAAATCTGCATAAACAGATCGCTGTTCGAACCGCCGCCAGTAATGATTACATGCTTCGCAAAGTGATTCATTTCATTACACATATTGTCGTAATTATTCTTCAGCGTCAGCGCCACGCTTTCCAGAATCGAACGATAAATCCAAGC # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGTTCCCCGCGTTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTGAGCGGGGATAAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 67996-68209 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJKX01000137.1 Escherichia albertii strain YS-F13-1a entry137, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 67996 29 100.0 32 ............................. CGACACAGCGTAATACTATACTAACATTCTCA 68057 29 100.0 32 ............................. CCTGCGGCATCAGCACTCACGGTACGGTCAAA 68118 29 96.6 32 ............T................ GGAGAAAAATCACGGCACAGAAGAAGAGTCAC 68179 29 82.8 0 ...............A........TCTG. | C,A [68191,68201] ========== ====== ====== ====== ============================= ================================ ================== 4 29 94.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCAGGTGAAATTGAGCCGCCACAACCCGCGCCGGATATGTTACCCCCTGCAATTCCTGAACCTGAAACATTAGGCGATAGCGGTCACCGGGGGCGCGGTGGATGAGTATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTTCGCGCAGGTGTATATGTCGGAGATACGTCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCACTCAACTGGCCGGTTGTGGAAATGTGGTAATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACTTGGGGCGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAATGTTTGAATTTTGTTGGTTGATTGTTGATGTAGAATAAATTTATTTAAAAACAGATATGTATGCTTAGT # Right flank : GCTTCTATTTTCAAACTCATCAGGACGCCTTTGCCAGTTCCTTCACCAGTGGCAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCTGGAAGCGCCTTATCAATATGTTGTTGATTATCCAGCCTTACATCATGCCAGCTATTTCCCTTCGGGAATGCTGCTGTTTTTGCGCGTTGTTGATAGCCGTCTTTATTTCCAAGACTCCAGTTTGTCGCTTCAACGGAAAGTACAGCAATACCTGCTTTGTCGAAAACTTCTGCATCATTACAACATCCCGTGCCTTTCGGATAATTTTTATTCAGACCTGGATTTGTGGCGGCGGCAATTCCATGGCTGCGTGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCCGGGGTGTTTACGCCGCTATTGAAATACAGTTTATCGCCTACAATCAGGTTATCGAGATTAATAACCAGTAGAGTATTTTTCTTTTCGGCTTCACTCATTCGCTTG # Questionable array : NO Score: 5.61 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //