Array 1 60450-61884 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NRCZ01000003.1 Aggregatibacter aphrophilus strain PN_517 NODE_3_length_164888_cov_51.5136, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                        	Insertion/Deletion
==========	======	======	======	================================	=======================================	==================
     60450	    32	 100.0	    33	................................	GGTCTCTCTTGCGCTTGAGCAAACTATGCCTAA      	
     60515	    32	 100.0	    34	................................	ATAATTTATCTCCAAAAAATAACCGCACCTGTTA     	
     60581	    32	 100.0	    34	................................	CGGCTGAAGTGATAAATAAAGAATTAAATGAGCG     	
     60647	    32	 100.0	    35	................................	AATAACAGGCACCGCCATACTGTTGCCGATAGCTT    	
     60714	    32	 100.0	    35	................................	CACTTGACTTATCCCTTTAAGTGTCATTTAATGAG    	
     60781	    32	 100.0	    34	................................	TTGCGTTTTTGTTTCTAAACGTTGTTGCACTGAT     	
     60847	    32	 100.0	    35	................................	TGAGTGCCCGAAAACATGGACACAAATAGGCACCG    	
     60914	    32	 100.0	    35	................................	CATCCCTTGGTTTTTCTCAAAACATATAAGTAACA    	
     60981	    32	 100.0	    36	................................	TCTGCCCCTGCCGGTTGGTTGGGTCTGGTTAAAGTT   	
     61049	    32	 100.0	    39	................................	TGGCTGGATTGGCTCAAGAACGTGAGCCGCTACAACCAG	
     61120	    32	 100.0	    35	................................	ACCGCTCGCCCAATACACGCGGACGGCATCAAGTA    	
     61187	    32	 100.0	    34	................................	TTGCAACACTCACGAGCAAGTTTGAAACAGATGA     	
     61253	    32	 100.0	    35	................................	GGAAAACCAAAGAGGCCTCATCAAATCTCGCCATG    	
     61320	    32	 100.0	    35	................................	ATGATCATCAAACCCGCTAACAATCTGATAAAAAA    	
     61387	    32	 100.0	    33	................................	GATTGGTTTGCCTTTGTCGTCGTAACTAAATAC      	
     61452	    32	 100.0	    36	................................	TAATCAAATTCGTTTAAAAATTCAGACAAAGCACAA   	
     61520	    32	 100.0	    36	................................	AGCAAGTCTAGCCCGGTCGCCGCACGAGGATTAAGC   	
     61588	    32	 100.0	    34	................................	ATTGCTTGATACGGGCGTGACCAGTCAGCCATTT     	
     61654	    32	 100.0	    34	................................	GCCCTGGGCGCCAGGCATTTTGGCCAGTTTTTCG     	
     61720	    32	 100.0	    35	................................	CACCGTTCATCATAAAGTGACTGGCGAAGGTGTGG    	
     61787	    32	  90.6	    34	........C.T..G..................	TACAATGTTTCCGTCTTTCGCCTTGTATCGCTCG     	
     61853	    32	  87.5	     0	........C.T..G.T................	|                                      	
==========	======	======	======	================================	=======================================	==================
        22	    32	  99.0	    35	GCAGCCGCTTCCGCGCGGCTGTGTGTTGAAAC	                                       	       

# Left flank :   TTGATGAGATAAGCCATGTTAATGCTGATTACTTATGATATTTCTTTTGACGATCCAAACGGGCAAGCGCGATTGCGCCGTATCGCAAAACATTGCTTAGATTACGGCGTGCGGGCACAATATTCGGTATTTGAATGTGATGTCACGCCTGACCAATGGGTCATGTTGAAAAACAAACTGTTGGAAACCTACGACCCTACATGCGACAGCCTGCGTTTTTACCATTTGGGCAGTAAGTGGCGTAATAAAGTGGAGTATCATGGGGCAAAACCGGCAGTGGATGTATTTAAAGACGTGCTTGTCATTTAGTTCGCTAACCTGTTGTTCTCATTAAAACCCTGATGGGATAGCGATCTTTATTTTCTTTAACAATTTGGATAAGTTAATCTATTTGTATAACGGCAATGTGGCCGTTATACTGACTAAACTCCTTATCATAAAATCAGTTAGCGAAATACAGTGTTTAATACACTGATTTTTCTTGCTTTTTTATGTAGGGA
# Right flank :  CCCCAAATACCAGTTTTTATAAATCTAAGTGGCATGCAGCCGCCTTCGGGTGAGTATATATTTTGTCTTTACGAAAAATAAGTGATCTATAAGTTTCAAGCCTTTCTACAAAAACGTCTGGAAAATCCACCGCACTTTTCTTTCATAAAAATAAAAAGCTGAACCTCTTTCTAGATTCAGCTTTTCTTTTGGGGTTAGATCATTTTAACCGCTCTTTTTGTTGACCTATGCTAAAATATTGTTACATTTTCGGAATTTCAACGCCCGAAGAGAGCAGGTCTTGAATATCCGATTTCAGTACATCAGCTTTTGGCCCATAAATGGCTTGAATGCCAGTGCCTTTGACGATAAAACCCATTGCGCCTGCTTGTTTCCAAGCTGCAGCATCGCCCACCAGCTCAGGGTTGTGAACGGTGATACGTAAACGGGTCATACAAGCATCTACCTCGGCAATATTGTTGCGTCCACCGAGAAGATTGATGATTTGCACCACTTGTGCA

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCAGCCGCTTCCGCGCGGCTGTGTGTTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-4.70,-3.60] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [70.0-58.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.55,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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