Array 1 412995-412306 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JTYD01000008.1 Pseudomonas aeruginosa strain AZPAE14499 AZPAE14499_contig_8, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
    412994	    28	 100.0	    32	............................	CGCAACAAGCATGGAGAACAGCATCAATTCGC 	
    412934	    28	 100.0	    32	............................	TTTGTCTCGATGATCATTTTGACGCGGCGCTC 	
    412874	    28	 100.0	    32	............................	ATCACGGCCACCCGAACACGTCGCCCAGGAAC 	
    412814	    28	 100.0	    32	............................	AGTGCCACCACCCGTTCCGCCGCCATCACCAT 	
    412754	    28	 100.0	    32	............................	GAAGAACACGCTGGCCGGTGAGTTCTCCGGGC 	
    412694	    28	 100.0	    33	............................	ATGCAGCCAGGGCTTACTCCGCTGCTGCTGGAC	
    412633	    28	 100.0	    32	............................	TTGAGCTTGTCGTTGTACTCGTCGAGGCTCAT 	
    412573	    28	  96.4	    32	.............T..............	ATACTGACTCAGCCAGGGAAAAGTCACTTGGA 	
    412513	    28	  96.4	    32	.............T..............	TCGGCGAGGCGATCGATCATGCGAATCAGCAA 	
    412453	    28	  96.4	    32	.............T..............	ATCGACCACGACAGTGCTTCCCTGGTCTATTC 	
    412393	    28	  96.4	    32	.............T..............	ATTGGCCGTGCAAGGTCCACCAGTCGATGCTT 	
    412333	    28	  96.4	     0	.............T..............	|                                	
==========	======	======	======	============================	=================================	==================
        12	    28	  98.5	    32	GTTCACTGCCGTACAGGCAGCTAAGAAA	                                 	       

# Left flank :   CATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCAATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCACTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCCGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGTTGCATCGCCCATCACAAGACCTTTCGCGCTCGAACGGCGAGGCTCACCGCCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTA
# Right flank :  CTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATCCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGCCAAGGCAGGCACAGAAAACAGCTTGAGCAGCAAACATGAAGCCCGCTCGAACGTCCCGTAGGGCGAATACCGCCACAGGCGGTATCCGCCGATGCCCCGGACAGCCGGCGGATAACCGCAAGC

# Questionable array : NO	 Score: 6.19
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGTACAGGCAGCTAAGAAA
# Alternate repeat :   GTTCACTGCCGTATAGGCAGCTAAGAAA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,9] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTCACTGCCGTACAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [0-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [38.3-58.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.92   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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